Trimin1|71082|CE71081_81 (polypeptide) Tribonema minus UTEX_B_3156

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
Namejgi.p|Trimin1|71082
Unique NameTrimin1|71082|CE71081_81
Typepolypeptide
OrganismTribonema minus UTEX_B_3156 (Tribonema minus UTEX_B_3156 )
Sequence length232
Homology
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BLAST of jgi.p|Trimin1|71082 vs. uniprot
Match: A0A835YU06_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YU06_9STRA)

HSP 1 Score: 438 bits (1127), Expect = 3.850e-155
Identity = 231/231 (100.00%), Postives = 231/231 (100.00%), Query Frame = 0 
Query:    1 MAMQEAMYGQESAQYAASLYTLATSHASMGHMEEAEALFRRVLSILGPGVHYNAHNLVASCHISLAGMLLSQERDEEALTLLSEAVGMLGTTHPDAAPAMGAYATALLKARREEEALDMATQALNLRTRNGALVDAPECVNLLLVVGHIHRMREEMRQAEEMVRMSLGMAERVFGAESPYTARVMQALSECLRTEPGCFTEAEELGRKAREILSKSEQQGGGEGPPSPDDQ 231
            MAMQEAMYGQESAQYAASLYTLATSHASMGHMEEAEALFRRVLSILGPGVHYNAHNLVASCHISLAGMLLSQERDEEALTLLSEAVGMLGTTHPDAAPAMGAYATALLKARREEEALDMATQALNLRTRNGALVDAPECVNLLLVVGHIHRMREEMRQAEEMVRMSLGMAERVFGAESPYTARVMQALSECLRTEPGCFTEAEELGRKAREILSKSEQQGGGEGPPSPDDQ
Sbjct:    1 MAMQEAMYGQESAQYAASLYTLATSHASMGHMEEAEALFRRVLSILGPGVHYNAHNLVASCHISLAGMLLSQERDEEALTLLSEAVGMLGTTHPDAAPAMGAYATALLKARREEEALDMATQALNLRTRNGALVDAPECVNLLLVVGHIHRMREEMRQAEEMVRMSLGMAERVFGAESPYTARVMQALSECLRTEPGCFTEAEELGRKAREILSKSEQQGGGEGPPSPDDQ 231
The following BLAST results are available for this feature:
BLAST of jgi.p|Trimin1|71082 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A835YU06_9STRA3.850e-155100.00Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePFAMPF13374TPR_10coord: 16..45
e-value: 0.015
score: 15.2
NoneNo IPR availablePFAMPF13424TPR_12coord: 63..128
e-value: 2.0E-7
score: 31.2
coord: 146..213
e-value: 7.9E-9
score: 35.7
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 203..231
NoneNo IPR availablePANTHERPTHR46082:SF6ATP/GTP-BINDING PROTEIN-RELATEDcoord: 155..213
NoneNo IPR availablePANTHERPTHR46082ATP/GTP-BINDING PROTEIN-RELATEDcoord: 155..213
NoneNo IPR availablePANTHERPTHR46082:SF6ATP/GTP-BINDING PROTEIN-RELATEDcoord: 8..127
NoneNo IPR availablePANTHERPTHR46082ATP/GTP-BINDING PROTEIN-RELATEDcoord: 8..127
IPR011990Tetratricopeptide-like helical domain superfamilyGENE3D1.25.40.10Tetratricopeptide repeat domaincoord: 130..223
e-value: 1.4E-9
score: 39.5
IPR011990Tetratricopeptide-like helical domain superfamilyGENE3D1.25.40.10Tetratricopeptide repeat domaincoord: 1..129
e-value: 2.9E-18
score: 67.9
IPR011990Tetratricopeptide-like helical domain superfamilySUPERFAMILY48452TPR-likecoord: 91..212
IPR011990Tetratricopeptide-like helical domain superfamilySUPERFAMILY48452TPR-likecoord: 11..129

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Contig_48contigContig_48:488276..494652 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Tribonema minus UTEX_B_31562021-06-17
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
jgi.p|Trimin1|71082mRNA_12610Tribonema minus UTEX_B_3156 mRNAContig_48 488225..494770 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Trimin1|71082|CE71081_81 ID=Trimin1|71082|CE71081_81|Name=jgi.p|Trimin1|71082|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=232bp
MAMQEAMYGQESAQYAASLYTLATSHASMGHMEEAEALFRRVLSILGPGV
HYNAHNLVASCHISLAGMLLSQERDEEALTLLSEAVGMLGTTHPDAAPAM
GAYATALLKARREEEALDMATQALNLRTRNGALVDAPECVNLLLVVGHIH
RMREEMRQAEEMVRMSLGMAERVFGAESPYTARVMQALSECLRTEPGCFT
EAEELGRKAREILSKSEQQGGGEGPPSPDDQ*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR011990TPR-like_helical_dom_sf