Trimin1|70829|CE70828_40 (polypeptide) Tribonema minus UTEX_B_3156

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
Namejgi.p|Trimin1|70829
Unique NameTrimin1|70829|CE70828_40
Typepolypeptide
OrganismTribonema minus UTEX_B_3156 (Tribonema minus UTEX_B_3156 )
Sequence length90
Homology
BLAST of jgi.p|Trimin1|70829 vs. uniprot
Match: A0A835YRW7_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YRW7_9STRA)

HSP 1 Score: 173 bits (439), Expect = 7.520e-55
Identity = 89/89 (100.00%), Postives = 89/89 (100.00%), Query Frame = 0
Query:    1 MENVDLTQVPNQLGTAVLKASTGAVVRATGDLASQESSVIATLYRIVQDTGGLLCGDPLKLITVSFNSYSYVVALGGGMVYIVKKQPEE 89
            MENVDLTQVPNQLGTAVLKASTGAVVRATGDLASQESSVIATLYRIVQDTGGLLCGDPLKLITVSFNSYSYVVALGGGMVYIVKKQPEE
Sbjct:    1 MENVDLTQVPNQLGTAVLKASTGAVVRATGDLASQESSVIATLYRIVQDTGGLLCGDPLKLITVSFNSYSYVVALGGGMVYIVKKQPEE 89          
BLAST of jgi.p|Trimin1|70829 vs. uniprot
Match: A0A7S2S4A7_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2S4A7_9STRA)

HSP 1 Score: 70.9 bits (172), Expect = 4.480e-14
Identity = 33/76 (43.42%), Postives = 55/76 (72.37%), Query Frame = 0
Query:   14 GTAVLKASTGAVVRATGDLASQESS-VIATLYRIVQDTGGLLCGDPLKLITVSFNSYSYVVALGGGMVYIVKKQPE 88
            GTA L+AS GAV++ +GDLAS+E   ++ + Y ++Q +G +L  +P++ +TV+F ++SY VA+ GG++YI K   E
Sbjct:   23 GTAALRASDGAVLKTSGDLASKEGQGLLPSFYAMLQASGSILKDEPMRKLTVNFETHSYAVAVSGGVIYIAKSPNE 98          
BLAST of jgi.p|Trimin1|70829 vs. uniprot
Match: A0A0L0FPG4_9EUKA (Uncharacterized protein (Fragment) n=1 Tax=Sphaeroforma arctica JP610 TaxID=667725 RepID=A0A0L0FPG4_9EUKA)

HSP 1 Score: 57.8 bits (138), Expect = 4.980e-9
Identity = 30/86 (34.88%), Postives = 58/86 (67.44%), Query Frame = 0
Query:    2 ENVDLTQVPNQLGTAVLKASTGAVVRATGDLASQESSVIATLYRIVQDTGGLLCGDPLKLITVSFNSYSYVVALGG--GMVYIVKK 85
            +++DL +V +Q+GT ++    G V+ ++GDL     ++ +T+  I+ DTG +L G PLK + ++++++ YV+ LGG  G +Y+VK+
Sbjct:    5 QSIDLQRVTDQVGTMIISRG-GDVLSSSGDL--DGPNIQSTMIGILHDTGCVLDGAPLKRVCLTYDTFEYVLTLGGERGDIYVVKR 87          
BLAST of jgi.p|Trimin1|70829 vs. uniprot
Match: A0A5D6YJ19_9STRA (Fibronectin type-III domain-containing protein n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6YJ19_9STRA)

HSP 1 Score: 58.2 bits (139), Expect = 7.280e-8
Identity = 36/84 (42.86%), Postives = 51/84 (60.71%), Query Frame = 0
Query:    6 LTQVPNQLGTAVLKASTGAVVRATGDLASQESSVIA-TLYRIVQDTGGLLCG---DPLKLITVSFNSYSYVVALGGGMVYIVKK 85
            LT V  Q+GT VL    G V+ ATG LA       A +++ I+QD   +L G   + L+ +T+SF SYSYVVA+ G  +Y+VK+
Sbjct:  583 LTAVQGQVGTLVLDLE-GQVLSATGQLAGDAGEQAAESVFSILQDAASVLEGAKNEVLERVTISFPSYSYVVAVNGSEIYVVKR 665          
The following BLAST results are available for this feature:
BLAST of jgi.p|Trimin1|70829 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 4
Match NameE-valueIdentityDescription
A0A835YRW7_9STRA7.520e-55100.00Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A7S2S4A7_9STRA4.480e-1443.42Hypothetical protein n=1 Tax=Rhizochromulina marin... [more]
A0A0L0FPG4_9EUKA4.980e-934.88Uncharacterized protein (Fragment) n=1 Tax=Sphaero... [more]
A0A5D6YJ19_9STRA7.280e-842.86Fibronectin type-III domain-containing protein n=1... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Contig_48contigContig_48:15610..16984 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Tribonema minus UTEX_B_31562021-06-17
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
jgi.p|Trimin1|70829mRNA_12571Tribonema minus UTEX_B_3156 mRNAContig_48 15573..17065 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Trimin1|70829|CE70828_40 ID=Trimin1|70829|CE70828_40|Name=jgi.p|Trimin1|70829|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=90bp
MENVDLTQVPNQLGTAVLKASTGAVVRATGDLASQESSVIATLYRIVQDT
GGLLCGDPLKLITVSFNSYSYVVALGGGMVYIVKKQPEE*
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