Trimin1|69958|CE69957_417 (polypeptide) Tribonema minus UTEX_B_3156

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
Namejgi.p|Trimin1|69958
Unique NameTrimin1|69958|CE69957_417
Typepolypeptide
OrganismTribonema minus UTEX_B_3156 (Tribonema minus UTEX_B_3156 )
Sequence length372
Homology
BLAST of jgi.p|Trimin1|69958 vs. uniprot
Match: A0A835Z020_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z020_9STRA)

HSP 1 Score: 659 bits (1701), Expect = 6.180e-238
Identity = 371/371 (100.00%), Postives = 371/371 (100.00%), Query Frame = 0
Query:    1 MQLVKAQVKEDAIRAQFQAAMAKKADLISIEVILLEDMSDCREQLVAELASTVTRVDRIDGVVAALPRSDDRSRARLYDWEDIQSLQDLLLESVQSMLDSDTKVAALRTKFEDAVRQKREVLGEIPAPSTVIEVVPEGGSGGEGAAQGSAALRPRVDLSSVSALSKDELSAAAGKSSKDAAVALGKTVAVGAQSLGDYLKSPKAQSLAATVVDLFQNTGGYFKAIGESFSVATKVFQQNTLPGEEITSFDTMFKTARDAVKSVQTSEEVAAALADVKQKGQAVPSTAGKIGQLAGEAIKDAQQNKELGTALAEALSNVQSALVALAGLGTKLASSAPPPGRMLPPSGPPGASATPIDVPSEASGGAADKSE 371
            MQLVKAQVKEDAIRAQFQAAMAKKADLISIEVILLEDMSDCREQLVAELASTVTRVDRIDGVVAALPRSDDRSRARLYDWEDIQSLQDLLLESVQSMLDSDTKVAALRTKFEDAVRQKREVLGEIPAPSTVIEVVPEGGSGGEGAAQGSAALRPRVDLSSVSALSKDELSAAAGKSSKDAAVALGKTVAVGAQSLGDYLKSPKAQSLAATVVDLFQNTGGYFKAIGESFSVATKVFQQNTLPGEEITSFDTMFKTARDAVKSVQTSEEVAAALADVKQKGQAVPSTAGKIGQLAGEAIKDAQQNKELGTALAEALSNVQSALVALAGLGTKLASSAPPPGRMLPPSGPPGASATPIDVPSEASGGAADKSE
Sbjct:    1 MQLVKAQVKEDAIRAQFQAAMAKKADLISIEVILLEDMSDCREQLVAELASTVTRVDRIDGVVAALPRSDDRSRARLYDWEDIQSLQDLLLESVQSMLDSDTKVAALRTKFEDAVRQKREVLGEIPAPSTVIEVVPEGGSGGEGAAQGSAALRPRVDLSSVSALSKDELSAAAGKSSKDAAVALGKTVAVGAQSLGDYLKSPKAQSLAATVVDLFQNTGGYFKAIGESFSVATKVFQQNTLPGEEITSFDTMFKTARDAVKSVQTSEEVAAALADVKQKGQAVPSTAGKIGQLAGEAIKDAQQNKELGTALAEALSNVQSALVALAGLGTKLASSAPPPGRMLPPSGPPGASATPIDVPSEASGGAADKSE 371          
BLAST of jgi.p|Trimin1|69958 vs. uniprot
Match: D7FTP6_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FTP6_ECTSI)

HSP 1 Score: 219 bits (558), Expect = 8.920e-63
Identity = 135/332 (40.66%), Postives = 202/332 (60.84%), Query Frame = 0
Query:    1 MQLVKAQVKEDAIRAQFQAAMAKKADLISIEVILLEDMSDCREQLVAELASTVTRVDRIDGVVAALPRSDDRSRARLYDWEDIQSLQDLLLESVQSMLDSDTKVAALRTKFEDAVRQKREVLGEIPAPSTVIEVVPEGGSGGEGAAQGSAALRPRVDLSSVSALSKDELSAAAGKSSKDAAVALGKTVAVGAQSLGDYLKSPKAQSLAATVVDLFQNTGGYFKAIGESFSVATKVFQQNTLPGEEITSFDTMFKTARDAVKSVQTSEEVAAALADVKQK-GQAVPSTAGKIGQLAGEAIKDAQQNKELGTALAEALSNVQSALVALAGLGTK 331
            MQ ++ QV E +IRA  + AMAKKAD+ SIEV+LLED+ +C+E+L  EL ST  R D ++GVVAALP   D +R R Y+W+D+Q LQ +L+ S +SM  SD +V  LRT+  D+V+QK+EVLGE+     V           EG  +G+  +       + + LS++EL  A  +SSK+ A+ + K+V+ G  SLGDYL+SP  Q +AA+ V +     G   ++  +F  A K F +N + GEE+TSFD + K+ + ++K+VQ S  V A L +      + VP  + ++G    EAIK A  N E+   + +AL +++  +V+LA LGTK
Sbjct:    1 MQALRGQVDEASIRAPIETAMAKKADVTSIEVMLLEDLVECKEKLEEELKSTSARGDTMNGVVAALPAEGDIARLRAYNWQDVQDLQGVLVSSAESMEASDAQVGLLRTQLMDSVQQKKEVLGEVSKAELV-----------EGGGRGARKMTTARAFQASTELSEEELLQAVTESSKNTALGVAKSVSAGTSSLGDYLRSPAGQDVAASTVLVIGALAGAASSVANAFKAAKKEFDENAISGEELTSFDKILKSLQSSLKAVQESPAVKAQLREAGDLLTKQVPQASARVGAGTAEAIKGAAANSEISNPVKDALDSLEQFVVSLAALGTK 321          
BLAST of jgi.p|Trimin1|69958 vs. uniprot
Match: A0A6H5KT89_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KT89_9PHAE)

HSP 1 Score: 221 bits (562), Expect = 9.860e-62
Identity = 137/329 (41.64%), Postives = 206/329 (62.61%), Query Frame = 0
Query:    4 VKAQVKEDAIRAQFQAAMAKKADLISIEVILLEDMSDCREQLVAELASTVTRVDRIDGVVAALPRSDDRSRARLYDWEDIQSLQDLLLESVQSMLDSDTKVAALRTKFEDAVRQKREVLGEIPAPSTVIEVVPEGGSGGEGAAQGSAALRPRVDLSSVSALSKDELSAAAGKSSKDAAVALGKTVAVGAQSLGDYLKSPKAQSLAATVVDLFQNTGGYFKAIGESFSVATKVFQQNTLPGEEITSFDTMFKTARDAVKSVQTSEEVAAALADVKQK-GQAVPSTAGKIGQLAGEAIKDAQQNKELGTALAEALSNVQSALVALAGLGTK 331
            ++ QV E +IRA  + AMAKKAD+ SIEV+LLED+ +C+E+L  EL ST  R + ++GVVAALP   D +R R Y+W+D+Q LQ++L+ S +SM  SD +V  LRT+  D+V+QK+EVLGE+    +  E+V  GG GG GA + + A   +        LS++EL  A  +SSK+ A+ + K+V+ G  SLGDYL+SP  Q +AA+ V +     G   ++  +F  A K F +N + GEE+TSFD + K+ + ++K+VQ S  V A L +      + VP  + ++G    EAIK A  N E+   + +AL +++  +V+LA LGTK
Sbjct:  225 LRGQVDEASIRAPIETAMAKKADVTSIEVMLLEDLVECKEKLEEELKSTSARAETMNGVVAALPAEGDIARLRAYNWQDVQDLQEVLVSSAESMEASDAQVGLLRTRLLDSVQQKKEVLGEV----SKAELVAGGGRGGRGAKKMTTARAFQASTE----LSEEELLQAVTESSKNTALGVAKSVSAGTSSLGDYLRSPAGQDVAASTVLVIGALAGAAASVANAFKAAKKEFDENAVSGEELTSFDKILKSLQSSLKAVQESPAVKAELREAGDLLTKQVPQASARVGAGTAEAIKGAVTNSEISNPVKDALDSLEEFVVSLAALGTK 545          
BLAST of jgi.p|Trimin1|69958 vs. uniprot
Match: A0A6U1MNE3_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A6U1MNE3_9STRA)

HSP 1 Score: 111 bits (278), Expect = 1.750e-23
Identity = 101/350 (28.86%), Postives = 184/350 (52.57%), Query Frame = 0
Query:    1 MQLVKAQVKEDAIRAQFQAAMAKKADLISIEVILLEDMSDCREQLVAELASTVTRVDRIDGVVAALPRS--DDRSRARLYDWEDIQSLQDLLLESVQSMLDSDTKVAALRTKFEDAVRQKREVLGEIPAPSTVIEVVPEGGSGG-------EGAAQGSAALRPRVDLSSVS-ALSKDELSAAAGKSSKDAAV--ALGKTVAVGAQ--SLGDYLKSPKAQSLAATVVDLFQNTGGYFKAIGESFSVATKVFQQNTLPGEEITSFDTMFKTARDAVKSVQTSEEVAAAL----ADVKQKGQAVPSTAGKIGQLAGEAIKDAQQNKELGTALAEALSNVQSALVALAGLGTKL 332
            M+ VK ++++ A+R   + A++ KA+L++IE+++ +++  C  QL A +  T  R D +   + +LP    D ++ AR Y WE++Q LQ+LLL+S+++  + + K+  ++ KF +A+RQ++ VL         +E++  GG          +  AQ   A+   +  +SV   +++D         +KD+ V  A   T AVGA   S G +++S + Q  A  VV+      G+F ++ +      + F  N++ G+++T+F  +  +  +A  S+  S+EV  ++    A+VKQ   AV  T+  + QL G+AI       E+  AL  +  + Q  L+ALA  G KL
Sbjct:  117 MEEVKERIEDAALRELMECAISAKANLVAIEMVVAQELETCIVQLRANIQDTRERCDLMKVALDSLPGQGQDLQALARQYSWEEVQELQELLLDSIEACQERNFKINNIKLKFAEALRQRQSVLEG-------VELLNAGGRAALYPSKEQQRRAQQVGAMAEVMKAASVKLTITRDMTEVDMLNVAKDSLVDFATNSTQAVGAIVISTGQWVQSEQGQDAAGAVVNAVTGVTGFFASVKDVVVTVVETFNNNSVKGDDMTNFKIIANSFINATASIPKSKEVQESVNNMNANVKQ---AVGGTSDFL-QLTGDAIAGGMATPEIYKALVCSSVSAQKLLIALAATGAKL 455          
The following BLAST results are available for this feature:
BLAST of jgi.p|Trimin1|69958 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 4
Match NameE-valueIdentityDescription
A0A835Z020_9STRA6.180e-238100.00Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
D7FTP6_ECTSI8.920e-6340.66Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5KT89_9PHAE9.860e-6241.64Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6U1MNE3_9STRA1.750e-2328.86Hypothetical protein n=1 Tax=Fibrocapsa japonica T... [more]
back to top
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 338..352
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 333..371

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Contig_46contigContig_46:888035..894298 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Tribonema minus UTEX_B_31562021-06-17
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
jgi.p|Trimin1|69958mRNA_4690Tribonema minus UTEX_B_3156 mRNAContig_46 887985..894481 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Trimin1|69958|CE69957_417 ID=Trimin1|69958|CE69957_417|Name=jgi.p|Trimin1|69958|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=372bp
MQLVKAQVKEDAIRAQFQAAMAKKADLISIEVILLEDMSDCREQLVAELA
STVTRVDRIDGVVAALPRSDDRSRARLYDWEDIQSLQDLLLESVQSMLDS
DTKVAALRTKFEDAVRQKREVLGEIPAPSTVIEVVPEGGSGGEGAAQGSA
ALRPRVDLSSVSALSKDELSAAAGKSSKDAAVALGKTVAVGAQSLGDYLK
SPKAQSLAATVVDLFQNTGGYFKAIGESFSVATKVFQQNTLPGEEITSFD
TMFKTARDAVKSVQTSEEVAAALADVKQKGQAVPSTAGKIGQLAGEAIKD
AQQNKELGTALAEALSNVQSALVALAGLGTKLASSAPPPGRMLPPSGPPG
ASATPIDVPSEASGGAADKSE*
back to top