Trimin1|62533|CE62532_147 (polypeptide) Tribonema minus UTEX_B_3156

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
Namejgi.p|Trimin1|62533
Unique NameTrimin1|62533|CE62532_147
Typepolypeptide
OrganismTribonema minus UTEX_B_3156 (Tribonema minus UTEX_B_3156 )
Sequence length158
Homology
BLAST of jgi.p|Trimin1|62533 vs. uniprot
Match: A0A835YTZ2_9STRA (Mitochondrial large subunit ribosomal protein-domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YTZ2_9STRA)

HSP 1 Score: 306 bits (784), Expect = 2.730e-105
Identity = 157/157 (100.00%), Postives = 157/157 (100.00%), Query Frame = 0
Query:    1 MLARKAIAAGCRAQQQRLQHSNTFLRKVVNAKRAREVRIETALDAPQTPPLKYIPTAQPAFVLAQGWAPPPEAPPTDIPFQVPRTGVSAALPVYTTYKNGRTRVMTVVRHVKGDVEEFSEELKKVCNAEVVERRGNSIQVKGNHVKGVQEWLLGLGF 157
            MLARKAIAAGCRAQQQRLQHSNTFLRKVVNAKRAREVRIETALDAPQTPPLKYIPTAQPAFVLAQGWAPPPEAPPTDIPFQVPRTGVSAALPVYTTYKNGRTRVMTVVRHVKGDVEEFSEELKKVCNAEVVERRGNSIQVKGNHVKGVQEWLLGLGF
Sbjct:    1 MLARKAIAAGCRAQQQRLQHSNTFLRKVVNAKRAREVRIETALDAPQTPPLKYIPTAQPAFVLAQGWAPPPEAPPTDIPFQVPRTGVSAALPVYTTYKNGRTRVMTVVRHVKGDVEEFSEELKKVCNAEVVERRGNSIQVKGNHVKGVQEWLLGLGF 157          
BLAST of jgi.p|Trimin1|62533 vs. uniprot
Match: M4BYA2_HYAAE (Uncharacterized protein n=1 Tax=Hyaloperonospora arabidopsidis (strain Emoy2) TaxID=559515 RepID=M4BYA2_HYAAE)

HSP 1 Score: 112 bits (280), Expect = 1.080e-28
Identity = 54/114 (47.37%), Postives = 73/114 (64.04%), Query Frame = 0
Query:   44 DAPQTPPLKYIPTAQPAFVLAQGWAPPPEAPPTDIPFQVPRTGVSAALPVYTTYKNGRTRVMTVVRHVKGDVEEFSEELKKVCNAEVVERRGNSIQVKGNHVKGVQEWLLGLGF 157
            D    PPLKY PT  P  V   GW+P PE+P  D+PF V RT +   LPVY  Y+NGRTRV+T++R  KGD +E  +E+ KVC  + V  R   ++V G+H   +++WL+GLGF
Sbjct:   41 DEVAVPPLKYEPTYVPETVSFNGWSPAPESPLPDLPFHVKRTALGLQLPVYRDYRNGRTRVLTILRRYKGDEQELRDEMSKVCEGKQVTARPGRLEVVGDHAVDIRKWLVGLGF 154          
BLAST of jgi.p|Trimin1|62533 vs. uniprot
Match: A0A484E697_BRELC (Uncharacterized protein n=1 Tax=Bremia lactucae TaxID=4779 RepID=A0A484E697_BRELC)

HSP 1 Score: 111 bits (277), Expect = 3.050e-28
Identity = 64/152 (42.11%), Postives = 86/152 (56.58%), Query Frame = 0
Query:   14 QQQRLQHSNTFLRKVVNAKRAREVRIETALDAPQ--------TPPLKYIPTAQPAFVLAQGWAPPPEAPPTDIPFQVPRTGVSAALPVYTTYKNGRTRVMTVVRHVKGDVEEFSEELKKVCNAEVVERRGNSIQVKGNHVKGVQEWLLGLGF 157
            Q++ L  +N   RK  N +  R+ R    L A Q         PPLKY PT  P  V   GW+P PEAP T +PF V RT     LPVY  Y+NGRTRV+T++R  +GD  E  +E+ K+C  + V  R   ++V G+H   V++WL+GLGF
Sbjct:    3 QRRLLTSTNAIERKASNRQIRRKTRHPANLRALQRQPQEELIVPPLKYEPTYVPEKVSFNGWSPAPEAPLTGLPFHVKRTATGLQLPVYRDYRNGRTRVLTILRRYRGDEHELRDEMSKICEGKEVVIRPGRMEVVGDHFSDVRKWLVGLGF 154          
BLAST of jgi.p|Trimin1|62533 vs. uniprot
Match: D0NCG0_PHYIT (Uncharacterized protein n=8 Tax=Peronosporaceae TaxID=4777 RepID=D0NCG0_PHYIT)

HSP 1 Score: 108 bits (269), Expect = 4.890e-27
Identity = 52/109 (47.71%), Postives = 71/109 (65.14%), Query Frame = 0
Query:   49 PPLKYIPTAQPAFVLAQGWAPPPEAPPTDIPFQVPRTGVSAALPVYTTYKNGRTRVMTVVRHVKGDVEEFSEELKKVCNAEVVERRGNSIQVKGNHVKGVQEWLLGLGF 157
            PPLKY PT  P  V   GW+P PEAP + +PF V RT     LPVY  ++NGRTRV+T++R  KGD +E  +E+ KVC  + V  R   ++V G+H   +++WL+GLGF
Sbjct:   46 PPLKYEPTYVPEKVSFNGWSPAPEAPLSGLPFHVKRTATGMQLPVYRDFRNGRTRVLTILRRYKGDEQELRDEMSKVCQGKEVIVRPGRLEVVGDHASDIRKWLVGLGF 154          
BLAST of jgi.p|Trimin1|62533 vs. uniprot
Match: A0A0W8C9Q0_PHYNI (Uncharacterized protein n=7 Tax=Phytophthora TaxID=4783 RepID=A0A0W8C9Q0_PHYNI)

HSP 1 Score: 110 bits (275), Expect = 1.140e-26
Identity = 66/161 (40.99%), Postives = 93/161 (57.76%), Query Frame = 0
Query:   16 QRLQHSNTFLRKVVNAKRA-------REVRIETALDA--------PQ----TPPLKYIPTAQPAFVLAQGWAPPPEAPPTDIPFQVPRTGVSAALPVYTTYKNGRTRVMTVVRHVKGDVEEFSEELKKVCNAEVVERRGNSIQVKGNHVKGVQEWLLGLGF 157
            Q+L+ S+ F R+V+ +  A       R++R +T   A        PQ     PPLKY PT  P  V   GW+P PEAP   +PF V RT V   LPVY  ++NGRTRV+T++R  KGD +E  +E+ KVC  + V  R   ++V G+H   +++WL+GLGF
Sbjct:  114 QQLRSSSMFQRRVIASANAVERVASNRQIRRKTRHPANLRALQRQPQEEVVVPPLKYEPTYVPEKVSFNGWSPAPEAPLPGLPFHVKRTAVGLQLPVYRDFRNGRTRVLTILRRYKGDEQELRDEMSKVCQGKEVIVRPGRLEVVGDHASDIRKWLVGLGF 274          
BLAST of jgi.p|Trimin1|62533 vs. uniprot
Match: A0A8K1FRY2_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1FRY2_PYTOL)

HSP 1 Score: 107 bits (266), Expect = 1.380e-26
Identity = 57/138 (41.30%), Postives = 77/138 (55.80%), Query Frame = 0
Query:   20 HSNTFLRKVVNAKRAREVRIETALDAPQTPPLKYIPTAQPAFVLAQGWAPPPEAPPTDIPFQVPRTGVSAALPVYTTYKNGRTRVMTVVRHVKGDVEEFSEELKKVCNAEVVERRGNSIQVKGNHVKGVQEWLLGLGF 157
            HSN  +R+      A   +        + PPLKY PT  P  V   GW+P PE P  ++PF V RT V   LPVY  Y+NGRTRV+T++R   GD  E   E+ K+C  + V  R   ++V G+H   V++WL+GLGF
Sbjct:   17 HSNRQIRRRTRHPAALRAQQRNPKPEVEVPPLKYEPTYVPEKVSFNGWSPAPEQPLPNLPFFVKRTAVGLQLPVYRDYRNGRTRVLTILRRFNGDEGELQAEMSKICGGKDVVLRPGRLEVTGDHASEVKKWLVGLGF 154          
BLAST of jgi.p|Trimin1|62533 vs. uniprot
Match: A0A5D6Y004_9STRA (Uncharacterized protein n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6Y004_9STRA)

HSP 1 Score: 107 bits (266), Expect = 1.420e-26
Identity = 53/111 (47.75%), Postives = 69/111 (62.16%), Query Frame = 0
Query:   47 QTPPLKYIPTAQPAFVLAQGWAPPPEAPPTDIPFQVPRTGVSAALPVYTTYKNGRTRVMTVVRHVKGDVEEFSEELKKVCNAEVVERRGNSIQVKGNHVKGVQEWLLGLGF 157
            + PPLKY PT +P  V   GW+PPP  P   +PF V RT V   LPVY   +NGRTRV+T++R   GD EE   EL KVC  + V  R   ++V G+H + +++WL GLGF
Sbjct:   45 EVPPLKYEPTYEPERVSFNGWSPPPAEPLPGLPFHVKRTAVGLQLPVYRDIRNGRTRVLTILRRYHGDEEELRTELSKVCLGKEVVARPGRLEVVGDHARDIKKWLTGLGF 155          
BLAST of jgi.p|Trimin1|62533 vs. uniprot
Match: A0A6A3EWI4_9STRA (Uncharacterized protein n=3 Tax=Phytophthora TaxID=4783 RepID=A0A6A3EWI4_9STRA)

HSP 1 Score: 104 bits (259), Expect = 1.570e-25
Identity = 51/109 (46.79%), Postives = 70/109 (64.22%), Query Frame = 0
Query:   49 PPLKYIPTAQPAFVLAQGWAPPPEAPPTDIPFQVPRTGVSAALPVYTTYKNGRTRVMTVVRHVKGDVEEFSEELKKVCNAEVVERRGNSIQVKGNHVKGVQEWLLGLGF 157
            PPLK+ P+  P  V   GW+P PEAP   +PF V RT V   LPVY  ++NGRTRV+T++R  KGD  E  +E+ KVC  + V  R   ++V G+H   +++WL+GLGF
Sbjct:   46 PPLKFEPSYVPEKVSFNGWSPAPEAPLPGLPFHVKRTAVGMQLPVYRDFRNGRTRVLTILRRYKGDELELRDEMSKVCQGKEVVVRPGRLEVVGDHASDIRKWLVGLGF 154          
BLAST of jgi.p|Trimin1|62533 vs. uniprot
Match: K3X7C0_GLOUD (Uncharacterized protein n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3X7C0_GLOUD)

HSP 1 Score: 104 bits (259), Expect = 1.570e-25
Identity = 53/111 (47.75%), Postives = 71/111 (63.96%), Query Frame = 0
Query:   47 QTPPLKYIPTAQPAFVLAQGWAPPPEAPPTDIPFQVPRTGVSAALPVYTTYKNGRTRVMTVVRHVKGDVEEFSEELKKVCNAEVVERRGNSIQVKGNHVKGVQEWLLGLGF 157
            + P LK+ PT  P  V   GW+P PEAP  ++PF V RT +   LPVY  Y+NGRTRV+T++R  KGD EE   E+ KVC  + V  R   ++V G+HV  +++WL GLGF
Sbjct:   44 EVPALKFEPTYVPEKVSFNGWSPAPEAPLPNLPFHVKRTALGLQLPVYRDYRNGRTRVLTILRRFKGDEEELRTEMSKVCLGKEVIVRPGRLEVVGDHVGDLKKWLTGLGF 154          
BLAST of jgi.p|Trimin1|62533 vs. uniprot
Match: F0WT29_9STRA (Uncharacterized protein AlNc14C243G9515 n=1 Tax=Albugo laibachii Nc14 TaxID=890382 RepID=F0WT29_9STRA)

HSP 1 Score: 99.4 bits (246), Expect = 1.450e-23
Identity = 51/111 (45.95%), Postives = 67/111 (60.36%), Query Frame = 0
Query:   47 QTPPLKYIPTAQPAFVLAQGWAPPPEAPPTDIPFQVPRTGVSAALPVYTTYKNGRTRVMTVVRHVKGDVEEFSEELKKVCNAEVVERRGNSIQVKGNHVKGVQEWLLGLGF 157
            + PPLKY PT  P  V   GW+P PE P   IPF+V RT     LPVY  Y+NGRTRV+T++R   G   E   E+ KVC  + V  R   ++V G+H+  +++WL GLGF
Sbjct:   45 EVPPLKYEPTYIPENVSFNGWSPAPENPLPGIPFKVKRTAKGLQLPVYRDYRNGRTRVLTILRRYDGHEGELQSEMSKVCGGKDVIARPGRLEVVGDHLMDLRKWLTGLGF 155          
The following BLAST results are available for this feature:
BLAST of jgi.p|Trimin1|62533 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A835YTZ2_9STRA2.730e-105100.00Mitochondrial large subunit ribosomal protein-doma... [more]
M4BYA2_HYAAE1.080e-2847.37Uncharacterized protein n=1 Tax=Hyaloperonospora a... [more]
A0A484E697_BRELC3.050e-2842.11Uncharacterized protein n=1 Tax=Bremia lactucae Ta... [more]
D0NCG0_PHYIT4.890e-2747.71Uncharacterized protein n=8 Tax=Peronosporaceae Ta... [more]
A0A0W8C9Q0_PHYNI1.140e-2640.99Uncharacterized protein n=7 Tax=Phytophthora TaxID... [more]
A0A8K1FRY2_PYTOL1.380e-2641.30Uncharacterized protein n=1 Tax=Pythium oligandrum... [more]
A0A5D6Y004_9STRA1.420e-2647.75Uncharacterized protein n=1 Tax=Pythium brassicum ... [more]
A0A6A3EWI4_9STRA1.570e-2546.79Uncharacterized protein n=3 Tax=Phytophthora TaxID... [more]
K3X7C0_GLOUD1.570e-2547.75Uncharacterized protein n=1 Tax=Globisporangium ul... [more]
F0WT29_9STRA1.450e-2345.95Uncharacterized protein AlNc14C243G9515 n=1 Tax=Al... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR007740Ribosomal protein L49/IMG2PFAMPF05046Img2coord: 79..157
e-value: 5.9E-21
score: 74.5
IPR007740Ribosomal protein L49/IMG2PANTHERPTHR13477MITOCHONDRIAL 39S RIBOSOMAL PROTEIN L49coord: 38..157
NoneNo IPR availableGENE3D3.30.780.10coord: 24..157
e-value: 6.5E-24
score: 86.4
IPR036877SUI1 domain superfamilySUPERFAMILY55159eIF1-likecoord: 83..156

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Contig_38contigContig_38:264174..265804 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Tribonema minus UTEX_B_31562021-06-17
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
jgi.p|Trimin1|62533mRNA_9286Tribonema minus UTEX_B_3156 mRNAContig_38 264110..265834 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Trimin1|62533|CE62532_147 ID=Trimin1|62533|CE62532_147|Name=jgi.p|Trimin1|62533|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=158bp
MLARKAIAAGCRAQQQRLQHSNTFLRKVVNAKRAREVRIETALDAPQTPP
LKYIPTAQPAFVLAQGWAPPPEAPPTDIPFQVPRTGVSAALPVYTTYKNG
RTRVMTVVRHVKGDVEEFSEELKKVCNAEVVERRGNSIQVKGNHVKGVQE
WLLGLGF*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR007740Ribosomal_L49/IMG2
IPR036877SUI1_dom_sf