Trimin1|62350|CE62349_1619 (polypeptide) Tribonema minus UTEX_B_3156

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
Namejgi.p|Trimin1|62350
Unique NameTrimin1|62350|CE62349_1619
Typepolypeptide
OrganismTribonema minus UTEX_B_3156 (Tribonema minus UTEX_B_3156 )
Sequence length262
Homology
BLAST of jgi.p|Trimin1|62350 vs. uniprot
Match: A0A836CPR3_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CPR3_9STRA)

HSP 1 Score: 500 bits (1287), Expect = 1.570e-178
Identity = 261/261 (100.00%), Postives = 261/261 (100.00%), Query Frame = 0
Query:    1 MKCTAVTFAALAAVATAKQTSGPVLHINVDDPSLSQGVGSLNLSGEVSRELVENVNAGLKYDYNTNRGLPSSLWVSTSAEVDDDVYVSAKAEYDLKSKSTIIEARLERGDDEIAIDFDTLTNEAGPLRIRKVFDANGRRLVVKPKFNVRDRTGELVINSEIDSDITTAELTLDQATDSASLEVSHRLDEYNIVCPKVDLKNGDMSVRLVRALENGGVLGVTADKRNIDWELEEDSWTVKGNIPLEDTQRSTISFKRSISLS 261
            MKCTAVTFAALAAVATAKQTSGPVLHINVDDPSLSQGVGSLNLSGEVSRELVENVNAGLKYDYNTNRGLPSSLWVSTSAEVDDDVYVSAKAEYDLKSKSTIIEARLERGDDEIAIDFDTLTNEAGPLRIRKVFDANGRRLVVKPKFNVRDRTGELVINSEIDSDITTAELTLDQATDSASLEVSHRLDEYNIVCPKVDLKNGDMSVRLVRALENGGVLGVTADKRNIDWELEEDSWTVKGNIPLEDTQRSTISFKRSISLS
Sbjct:    1 MKCTAVTFAALAAVATAKQTSGPVLHINVDDPSLSQGVGSLNLSGEVSRELVENVNAGLKYDYNTNRGLPSSLWVSTSAEVDDDVYVSAKAEYDLKSKSTIIEARLERGDDEIAIDFDTLTNEAGPLRIRKVFDANGRRLVVKPKFNVRDRTGELVINSEIDSDITTAELTLDQATDSASLEVSHRLDEYNIVCPKVDLKNGDMSVRLVRALENGGVLGVTADKRNIDWELEEDSWTVKGNIPLEDTQRSTISFKRSISLS 261          
BLAST of jgi.p|Trimin1|62350 vs. uniprot
Match: A0A836CCC7_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CCC7_9STRA)

HSP 1 Score: 378 bits (971), Expect = 2.090e-130
Identity = 190/261 (72.80%), Postives = 227/261 (86.97%), Query Frame = 0
Query:    1 MKCTAVTFAALAAVATAKQTSGPVLHINVDDPSLSQGVGSLNLSGEVSRELVENVNAGLKYDYNTNRGLPSSLWVSTSAEVDDDVYVSAKAEYDLKSKSTIIEARLERGDDEIAIDFDTLTNEAGPLRIRKVFDANGRRLVVKPKFNVRDRTGELVINSEIDSDITTAELTLDQATDSASLEVSHRLDEYNIVCPKVDLKNGDMSVRLVRALENGGVLGVTADKRNIDWELEEDSWTVKGNIPLEDTQRSTISFKRSISLS 261
            MKC AV FAA+ +VA A Q SGPV H+N++DPSL  G GSLNL GE SRELV+NVNAG+KYDYN NRGLPSSLWVSTSA++DDD  + AKAEYD+KSK+T+IEARLERG D I+IDFDT +NEAGPL++RKV D NGRRL ++P  NVRDRTGELVIN+E+D D TTAELTL+QA +SASLEVSHRLD++N+V PKV+LK+GD+SVRL RAL+NGGV+ VTAD++N+DWE  E++WTVKGNIPLEDT  STISFKRSI+LS
Sbjct:    1 MKCVAV-FAAILSVAFAGQQSGPVFHVNINDPSLKDGAGSLNLEGEYSRELVDNVNAGVKYDYNANRGLPSSLWVSTSADIDDDTKLCAKAEYDVKSKATVIEARLERGSDGISIDFDTGSNEAGPLKLRKVLDMNGRRLTLEPTINVRDRTGELVINTEVDEDKTTAELTLNQADESASLEVSHRLDDFNVVSPKVNLKSGDVSVRLNRALDNGGVIEVTADRKNVDWEFNENAWTVKGNIPLEDTGASTISFKRSINLS 260          
BLAST of jgi.p|Trimin1|62350 vs. uniprot
Match: A0A6H5K004_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K004_9PHAE)

HSP 1 Score: 248 bits (634), Expect = 1.040e-77
Identity = 122/240 (50.83%), Postives = 171/240 (71.25%), Query Frame = 0
Query:   22 GPVLHINVDDPSLSQGVGSLNLSGEVSRELVENVNAGLKYDYNTNRGLPSSLWVSTSAEVDDDVYVSAKAEYDLKSKSTIIEARLERGDDEIAIDFDTLTNEAGPLRIRKVFDANGRRLVVKPKFNVRDRTGELVINSEIDSDITTAELTLDQATDSASLEVSHRLDEYNIVCPKVDLKNGDMSVRLVRALENGGVLGVTADKRNIDWELEEDSWTVKGNIPL-EDTQRSTISFKRSISL 260
            GP   I+V D SLS GVGSLNL G   RE+V+NV+ G+ Y +N  RG+P+SLWVST+ ++ DD+  + +A+ D+ SK+ +I+ R+  G D +A+DFDT  +  GPLRI K  D NGR+++V+P  +V+ +TGE+VI +E+D D+T+AELT++ A DSA LEV HRLD+ N++ PKVDLK GD++VRL R+L +   +  TA + N+DWE  E  W VKGN+PL  D     ISFKRSI+L
Sbjct:  133 GPTFTIDVSDHSLSDGVGSLNLEGRFQREVVDNVDCGVVYKFNERRGMPTSLWVSTTQDLGDDMTANLRADMDIDSKNAVIDCRVNSGRDSVAVDFDTADSTMGPLRITKHLDLNGRKVIVQPTVDVQGKTGEVVIAAELDGDVTSAELTVNHAEDSAVLEVCHRLDDNNVISPKVDLKTGDIAVRLNRSLGDARAVKFTAQRENVDWEYLEGPWVVKGNVPLTSDGSTGAISFKRSITL 372          
BLAST of jgi.p|Trimin1|62350 vs. uniprot
Match: D8LJ91_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LJ91_ECTSI)

HSP 1 Score: 245 bits (626), Expect = 1.460e-77
Identity = 120/240 (50.00%), Postives = 172/240 (71.67%), Query Frame = 0
Query:   22 GPVLHINVDDPSLSQGVGSLNLSGEVSRELVENVNAGLKYDYNTNRGLPSSLWVSTSAEVDDDVYVSAKAEYDLKSKSTIIEARLERGDDEIAIDFDTLTNEAGPLRIRKVFDANGRRLVVKPKFNVRDRTGELVINSEIDSDITTAELTLDQATDSASLEVSHRLDEYNIVCPKVDLKNGDMSVRLVRALENGGVLGVTADKRNIDWELEEDSWTVKGNIPLEDTQRS-TISFKRSISL 260
            GP   I+V D SLS GVGSLNL G   RE+V+NV+ G+ Y +N  RG+P+SLWVST+ ++ DD+  + +A+ D+ SK+ +I+ R+  G D +A+DFDT  +  GPLRI K  D NGR+++V+P  +V+ +TGE+V+ +E+D D+T+AELT++ A DSA LEV HRLD+ N++ PKVDLK GD++VRL R+L +   +  TA + N+DWE  E +W VKGN+PL     +  ISFKRSI+L
Sbjct:   53 GPTFTIDVSDHSLSDGVGSLNLEGRFQREVVDNVDCGVVYKFNECRGMPTSLWVSTTQDLGDDMTANLRADMDIDSKNAVIDCRVNSGRDSVAVDFDTADSTMGPLRITKHLDLNGRKVIVQPTVDVQGKTGEVVVAAELDGDVTSAELTVNHAEDSAVLEVCHRLDDNNVISPKVDLKTGDIAVRLNRSLGDARAVKFTAQRENVDWEYLEGAWVVKGNVPLTSNGATGAISFKRSITL 292          
The following BLAST results are available for this feature:
BLAST of jgi.p|Trimin1|62350 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 4
Match NameE-valueIdentityDescription
A0A836CPR3_9STRA1.570e-178100.00Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A836CCC7_9STRA2.090e-13072.80Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A6H5K004_9PHAE1.040e-7750.83Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D8LJ91_ECTSI1.460e-7750.00Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Contig_375contigContig_375:2062..5535 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Tribonema minus UTEX_B_31562021-06-17
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
jgi.p|Trimin1|62350mRNA_18687Tribonema minus UTEX_B_3156 mRNAContig_375 2027..5931 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Trimin1|62350|CE62349_1619 ID=Trimin1|62350|CE62349_1619|Name=jgi.p|Trimin1|62350|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=262bp
MKCTAVTFAALAAVATAKQTSGPVLHINVDDPSLSQGVGSLNLSGEVSRE
LVENVNAGLKYDYNTNRGLPSSLWVSTSAEVDDDVYVSAKAEYDLKSKST
IIEARLERGDDEIAIDFDTLTNEAGPLRIRKVFDANGRRLVVKPKFNVRD
RTGELVINSEIDSDITTAELTLDQATDSASLEVSHRLDEYNIVCPKVDLK
NGDMSVRLVRALENGGVLGVTADKRNIDWELEEDSWTVKGNIPLEDTQRS
TISFKRSISLS*
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