Trimin1|6109|CE6108_193 (polypeptide) Tribonema minus UTEX_B_3156

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
Namejgi.p|Trimin1|6109
Unique NameTrimin1|6109|CE6108_193
Typepolypeptide
OrganismTribonema minus UTEX_B_3156 (Tribonema minus UTEX_B_3156 )
Sequence length369
Homology
BLAST of jgi.p|Trimin1|6109 vs. uniprot
Match: A0A835ZFF1_9STRA (Ubiquitin-conjugating enzyme/RWD-like protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZFF1_9STRA)

HSP 1 Score: 686 bits (1769), Expect = 2.130e-248
Identity = 368/368 (100.00%), Postives = 368/368 (100.00%), Query Frame = 0
Query:    1 MLPLVSAALGGSSSRRDSGWSRRSVTRHTCILALLAACMLLASSGVGAAAVAAAGDSTYGLRKSIGRAALTGKPGAEECNASDQSSIVLAARRRSQALVXXXXXXXXXXXXXREPKASREWREQRGLMLRGGGKGSLSKFQLFMQIFIPGYGEDAAGDDGDGKAALTSAQPGLAKRVKRFLSALFSGGKKQPTKGAKGGKGKGGSSKDDTVGKHLASKHRPGDANYRIQKELQEFMKNPPEGCQVSVGKSLKVWIITITGAKGTIFEGEKFKLRVGFPENYPLKPPSVYFLQDPPPPEHEHVYTNGDICLSLLGKDWTPNLTASALALSILSMLSSAKEKRRPADNFQNANRRPGQSQDSWIYHDNFS 368
            MLPLVSAALGGSSSRRDSGWSRRSVTRHTCILALLAACMLLASSGVGAAAVAAAGDSTYGLRKSIGRAALTGKPGAEECNASDQSSIVLAARRRSQALVXXXXXXXXXXXXXREPKASREWREQRGLMLRGGGKGSLSKFQLFMQIFIPGYGEDAAGDDGDGKAALTSAQPGLAKRVKRFLSALFSGGKKQPTKGAKGGKGKGGSSKDDTVGKHLASKHRPGDANYRIQKELQEFMKNPPEGCQVSVGKSLKVWIITITGAKGTIFEGEKFKLRVGFPENYPLKPPSVYFLQDPPPPEHEHVYTNGDICLSLLGKDWTPNLTASALALSILSMLSSAKEKRRPADNFQNANRRPGQSQDSWIYHDNFS
Sbjct:    1 MLPLVSAALGGSSSRRDSGWSRRSVTRHTCILALLAACMLLASSGVGAAAVAAAGDSTYGLRKSIGRAALTGKPGAEECNASDQSSIVLAARRRSQALVXXXXXXXXXXXXXREPKASREWREQRGLMLRGGGKGSLSKFQLFMQIFIPGYGEDAAGDDGDGKAALTSAQPGLAKRVKRFLSALFSGGKKQPTKGAKGGKGKGGSSKDDTVGKHLASKHRPGDANYRIQKELQEFMKNPPEGCQVSVGKSLKVWIITITGAKGTIFEGEKFKLRVGFPENYPLKPPSVYFLQDPPPPEHEHVYTNGDICLSLLGKDWTPNLTASALALSILSMLSSAKEKRRPADNFQNANRRPGQSQDSWIYHDNFS 368          
BLAST of jgi.p|Trimin1|6109 vs. uniprot
Match: D7FQY7_ECTSI (Ubiquitin-conjugating enzyme n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FQY7_ECTSI)

HSP 1 Score: 254 bits (650), Expect = 2.990e-79
Identity = 150/301 (49.83%), Postives = 185/301 (61.46%), Query Frame = 0
Query:   76 AEECNASDQSSIVLAARRRSQALVXXXXXXXXXXXXXR-EPKASREWREQRGLMLRGGGKGSLSKFQLFMQIFIPGYGEDAAGDDGDGKAALTSAQPGLAKRVKRFLSALFSGGKKQPT---------KGAKGGKGKGGSSKDDTVGKHLASKHRPGDANYRIQKELQEFMKNPPEGCQVSVGKSLKVWIITITGAKGTIFEGEKFKLRVGFPENYPLKPPSVYFLQDPPPPEHEHVYTNGDICLSLLG-KDWTPNLTASALALSILSMLSSAKEKRRPADNFQNANRRPGQSQDSWIYHD 365
            A  C     S   LA  RRS AL              + E     +  E   L++RGG     S   LFM++ +PG+  D  GD   G+  L     GL +R+KR +S +F   +  P          K     K   G +K  T   HL   +RPG+ANYRIQKEL+EFM NPP+ C+VSVGK+++VWIITI+GA+GTI+ GEKF+LRV FPE YP KPP+VYFLQ PPPP+H+H+YTNGDICLSLL  +DW PNLT  +LALSILSMLSSAKEKR P DN  +A  RPGQ+Q  WIYHD
Sbjct:   20 ASTCQGGAPSRAFLAHGRRSSALTSSNARSCNPGPTTQGESGHGEDALETFALVVRGGSDEDPSLTTLFMRVLMPGFRRDKGGD---GELDLEGG--GLMRRLKRLVSGVFRKVRGSPVPITEPKGEAKNVATKKKSKGKAKGATTTSHLEKTYRPGNANYRIQKELKEFMANPPDCCKVSVGKNIRVWIITISGAEGTIYAGEKFRLRVSFPEEYPTKPPAVYFLQSPPPPKHQHIYTNGDICLSLLSSRDWKPNLTVMSLALSILSMLSSAKEKRLPEDNATHAEARPGQAQ-QWIYHD 314          
BLAST of jgi.p|Trimin1|6109 vs. uniprot
Match: W7U274_9STRA (Ubiquitin-conjugating enzyme n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7U274_9STRA)

HSP 1 Score: 215 bits (547), Expect = 7.710e-64
Identity = 113/199 (56.78%), Postives = 147/199 (73.87%), Query Frame = 0
Query:  176 RVKRFLSALFSGGK-------KQPT--KGAKGGKGKGGSSKDDTVGKHLASKHRPGDANYRIQKELQEFMKNPPEGCQVSVGKSLKVWIITITGAKGTIFEGEKFKLRVGFPENYPLKPPSVYFLQDPPPPEHEHVYTNGDICLSLLGKDWTPNLTASALALSILSMLSSAKEKRRPADNFQNANRRPGQSQDSWIYHD 365
            R+KRFL  L++          K+ T   G+ GG G GG    + + KHL  + R G+AN+R+QKEL+E++ NP E  QV+VG +++VW++T+TGAKGTIF GEK+KL+  FP +YP KPPSVYFLQ  PPP HEHVYTNGDICL+LLG+DW PN+TAS LALSILSMLSSA+EK+ P DN  +A+  PG+ Q +W+YHD
Sbjct:  116 RIKRFLGLLWNAAGSSAGHDVKRSTIRSGSLGGVG-GGRLGGNRMQKHLGKEFRRGNANFRVQKELREWLANPTENLQVAVGDNIRVWVVTLTGAKGTIFAGEKYKLKFTFPMDYPSKPPSVYFLQ--PPPRHEHVYTNGDICLNLLGRDWRPNMTASMLALSILSMLSSAREKKIPQDNHVHADNPPGKEQANWLYHD 311          
BLAST of jgi.p|Trimin1|6109 vs. uniprot
Match: A0A7S1TYR4_9STRA (Hypothetical protein n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1TYR4_9STRA)

HSP 1 Score: 211 bits (537), Expect = 2.720e-63
Identity = 100/158 (63.29%), Postives = 127/158 (80.38%), Query Frame = 0
Query:  208 DDTVGKHLASKHRPGDANYRIQKELQEFMKNPPEGCQVSVGKSLKVWIITITGAKGTIFEGEKFKLRVGFPENYPLKPPSVYFLQDPPPPEHEHVYTNGDICLSLLGKDWTPNLTASALALSILSMLSSAKEKRRPADNFQNANRRPGQSQDSWIYHD 365
            ++   + L  + + G+  YRIQKEL+EF+ NPP  C+VSVG +++VW +T+TGA+ T++EGE++KLRV FP  YP KPPSVYFL+  PPP+H HVYTNGDICLSLLGKDW PNLTAS+LALSILSMLSSA+EKR P DN Q+A+  PG+ QD W+YHD
Sbjct:   84 ENKASRQLGKRVKRGNPLYRIQKELREFVDNPPPNCKVSVGDNIRVWTVTLTGAEDTLYEGEEYKLRVTFPTGYPTKPPSVYFLK--PPPKHPHVYTNGDICLSLLGKDWRPNLTASSLALSILSMLSSAREKRLPNDNAQHADSPPGKPQDGWMYHD 239          
BLAST of jgi.p|Trimin1|6109 vs. uniprot
Match: A0A0G4GVI6_9ALVE (UBC core domain-containing protein n=1 Tax=Chromera velia CCMP2878 TaxID=1169474 RepID=A0A0G4GVI6_9ALVE)

HSP 1 Score: 207 bits (526), Expect = 3.410e-62
Identity = 102/167 (61.08%), Postives = 124/167 (74.25%), Query Frame = 0
Query:  199 GKGKGGSSKDDTVGKHLASKHRPGDANYRIQKELQEFMKNPPEGCQVSVGKSLKVWIITITGAKGTIFEGEKFKLRVGFPENYPLKPPSVYFLQDPPPPEHEHVYTNGDICLSLLGKDWTPNLTASALALSILSMLSSAKEKRRPADNFQNANRRPGQSQDSWIYHD 365
            GK  GG  K D    HL +K  PG+ NYRIQKEL+EF+K+PP  C+VSVG +L+ WIITI G +GT++E E +KL+V FP+ YPL PPSVYFL+  P P H HVYTNGDICL+LLG DW P LT SA+AL+ILSMLSSAKEK+ P DN  +A   PG  Q +W+YHD
Sbjct:   35 GKKSGGKKKADATSNHLKAKWTPGNPNYRIQKELKEFIKSPPPNCRVSVGSNLRAWIITIKGVEGTLYEKETYKLKVVFPDEYPLVPPSVYFLR--PAPRHPHVYTNGDICLNLLGTDWKPTLTVSAIALAILSMLSSAKEKKIPLDNAAHAEAPPGGQQHNWMYHD 199          
BLAST of jgi.p|Trimin1|6109 vs. uniprot
Match: A0A7S4RNY0_9STRA (Hypothetical protein n=1 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A7S4RNY0_9STRA)

HSP 1 Score: 205 bits (521), Expect = 1.530e-59
Identity = 95/153 (62.09%), Postives = 121/153 (79.08%), Query Frame = 0
Query:  213 KHLASKHRPGDANYRIQKELQEFMKNPPEGCQVSVGKSLKVWIITITGAKGTIFEGEKFKLRVGFPENYPLKPPSVYFLQDPPPPEHEHVYTNGDICLSLLGKDWTPNLTASALALSILSMLSSAKEKRRPADNFQNANRRPGQSQDSWIYHD 365
            KHL++K +    NYRIQKEL+ F+ +PP    V+VGK+++VWI+TITGA  TI+EGEK++LR+ FP NYP  PPSVYFL  PP P+HEHVYTNGDICLSLLGKDW P +T  +LA+SILS+LSSA+EK  P DN  ++  +PG +QD+WIYHD
Sbjct:  195 KHLSAKLKSNSPNYRIQKELRAFLTSPPPNLSVAVGKNIRVWIVTITGASNTIYEGEKYRLRMSFPSNYPTSPPSVYFL--PPTPKHEHVYTNGDICLSLLGKDWRPTMTGQSLAVSILSLLSSAREKSLPMDNAAHSQNKPGGNQDNWIYHD 345          
BLAST of jgi.p|Trimin1|6109 vs. uniprot
Match: A0A7S2R2N4_9STRA (Hypothetical protein n=1 Tax=Eucampia antarctica TaxID=49252 RepID=A0A7S2R2N4_9STRA)

HSP 1 Score: 199 bits (505), Expect = 6.040e-59
Identity = 91/152 (59.87%), Postives = 119/152 (78.29%), Query Frame = 0
Query:  214 HLASKHRPGDANYRIQKELQEFMKNPPEGCQVSVGKSLKVWIITITGAKGTIFEGEKFKLRVGFPENYPLKPPSVYFLQDPPPPEHEHVYTNGDICLSLLGKDWTPNLTASALALSILSMLSSAKEKRRPADNFQNANRRPGQSQDSWIYHD 365
            H+A + +  + NYRIQ+EL+EF+K+PP   +V+VGK+++VWIIT+ GAK TI++G+KF+LRV FP +YP  PPSVYFLQ  P P HEHVYTNGDICLSLLGKDW P +TA ++A+SILS+LS A+ K  P DN +N   +PG  QD W+YHD
Sbjct:   57 HIAKELKSNNPNYRIQRELKEFLKSPPPNLKVNVGKNIRVWIITLIGAKNTIYDGDKFRLRVQFPADYPTSPPSVYFLQ--PTPRHEHVYTNGDICLSLLGKDWRPTMTAQSIAMSILSILSGAQRKSLPMDNARNCLNKPGAKQDDWVYHD 206          
BLAST of jgi.p|Trimin1|6109 vs. uniprot
Match: A0A0G4GQN8_VITBC (UBC core domain-containing protein n=1 Tax=Vitrella brassicaformis (strain CCMP3155) TaxID=1169540 RepID=A0A0G4GQN8_VITBC)

HSP 1 Score: 198 bits (503), Expect = 1.090e-58
Identity = 89/152 (58.55%), Postives = 119/152 (78.29%), Query Frame = 0
Query:  214 HLASKHRPGDANYRIQKELQEFMKNPPEGCQVSVGKSLKVWIITITGAKGTIFEGEKFKLRVGFPENYPLKPPSVYFLQDPPPPEHEHVYTNGDICLSLLGKDWTPNLTASALALSILSMLSSAKEKRRPADNFQNANRRPGQSQDSWIYHD 365
            HL    RPG  NYRIQKEL++F+  PP+ C+++VG +++VWIIT+TG +GT++EGEK++L++ FP  YPLKPP +YFLQ  P P H HVY+NGDICL+LLG DW P LT +++ALSILSMLSSAKEK+ P DN  +A+ + G  Q +W+YHD
Sbjct:   54 HLRRSFRPGHVNYRIQKELKDFLTTPPDHCEIAVGSNIRVWIITLTGVEGTLYEGEKYRLKIVFPPEYPLKPPIIYFLQ--PTPRHPHVYSNGDICLNLLGTDWKPTLTVASVALSILSMLSSAKEKKLPLDNASHADLKAGGQQHNWMYHD 203          
BLAST of jgi.p|Trimin1|6109 vs. uniprot
Match: A0A7S2L3M3_9STRA (Hypothetical protein n=1 Tax=Leptocylindrus danicus TaxID=163516 RepID=A0A7S2L3M3_9STRA)

HSP 1 Score: 199 bits (507), Expect = 2.010e-57
Identity = 96/159 (60.38%), Postives = 119/159 (74.84%), Query Frame = 0
Query:  207 KDDTVGKHLASKHRPGDANYRIQKELQEFMKNPPEGCQVSVGKSLKVWIITITGAKGTIFEGEKFKLRVGFPENYPLKPPSVYFLQDPPPPEHEHVYTNGDICLSLLGKDWTPNLTASALALSILSMLSSAKEKRRPADNFQNANRRPGQSQDSWIYHD 365
            K + V  HL S     + NYRIQ+EL+ F+K+PPE   V VGK+++VWIIT+TGA G+I+EGEK++L V FP+NYP  PPSVYFL   P P HEHVYTNGDICLSLLGKDW P +TA ++ALSILS+LSSA  K  P DN  +A  +PG +QD W+YHD
Sbjct:  192 KSEAVDFHLKSSLSQNNPNYRIQQELKAFIKSPPENLSVKVGKNIRVWIITLTGATGSIYEGEKYRLHVKFPKNYPAAPPSVYFLN--PTPRHEHVYTNGDICLSLLGKDWRPTMTAQSIALSILSILSSASHKALPQDNAAHAGAQPGLAQDDWVYHD 348          
BLAST of jgi.p|Trimin1|6109 vs. uniprot
Match: B7FUS1_PHATC (Predicted protein n=1 Tax=Phaeodactylum tricornutum (strain CCAP 1055/1) TaxID=556484 RepID=B7FUS1_PHATC)

HSP 1 Score: 190 bits (483), Expect = 3.340e-56
Identity = 90/152 (59.21%), Postives = 114/152 (75.00%), Query Frame = 0
Query:  214 HLASKHRPGDANYRIQKELQEFMKNPPEGCQVSVGKSLKVWIITITGAKGTIFEGEKFKLRVGFPENYPLKPPSVYFLQDPPPPEHEHVYTNGDICLSLLGKDWTPNLTASALALSILSMLSSAKEKRRPADNFQNANRRPGQSQDSWIYHD 365
            HL +K +    NYRIQ+EL+ F+ +PP    V VGK+L+VWI++I GAKGT++EGE FKLR+ FP  YP  PPSVYFL  P  P HEHVYTNGDICLSLLGKDW P +TA ++A+SILS+LSSA+ K  P DN ++A  +PG+ Q  W+YHD
Sbjct:   16 HLQAKLKSTSPNYRIQRELKAFLSDPPSNLSVKVGKNLRVWIVSIEGAKGTVYEGEIFKLRISFPPQYPTVPPSVYFLP-PSIPVHEHVYTNGDICLSLLGKDWRPTMTAQSIAVSILSILSSAQSKSLPMDNARHAQNKPGEYQKDWVYHD 166          
The following BLAST results are available for this feature:
BLAST of jgi.p|Trimin1|6109 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A835ZFF1_9STRA2.130e-248100.00Ubiquitin-conjugating enzyme/RWD-like protein n=1 ... [more]
D7FQY7_ECTSI2.990e-7949.83Ubiquitin-conjugating enzyme n=1 Tax=Ectocarpus si... [more]
W7U274_9STRA7.710e-6456.78Ubiquitin-conjugating enzyme n=2 Tax=Monodopsidace... [more]
A0A7S1TYR4_9STRA2.720e-6363.29Hypothetical protein n=1 Tax=Phaeomonas parva TaxI... [more]
A0A0G4GVI6_9ALVE3.410e-6261.08UBC core domain-containing protein n=1 Tax=Chromer... [more]
A0A7S4RNY0_9STRA1.530e-5962.09Hypothetical protein n=1 Tax=Ditylum brightwellii ... [more]
A0A7S2R2N4_9STRA6.040e-5959.87Hypothetical protein n=1 Tax=Eucampia antarctica T... [more]
A0A0G4GQN8_VITBC1.090e-5858.55UBC core domain-containing protein n=1 Tax=Vitrell... [more]
A0A7S2L3M3_9STRA2.010e-5760.38Hypothetical protein n=1 Tax=Leptocylindrus danicu... [more]
B7FUS1_PHATC3.340e-5659.21Predicted protein n=1 Tax=Phaeodactylum tricornutu... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableSMARTSM00212ubc_7coord: 226..362
e-value: 3.1E-25
score: 99.8
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 201..223
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 191..223
NoneNo IPR availablePANTHERPTHR24068:SF148UBIQUITIN-CONJUGATING ENZYME E2coord: 173..366
NoneNo IPR availablePANTHERPTHR24068UBIQUITIN-CONJUGATING ENZYME E2coord: 173..366
IPR000608Ubiquitin-conjugating enzyme E2PFAMPF00179UQ_concoord: 227..346
e-value: 3.7E-28
score: 97.9
IPR000608Ubiquitin-conjugating enzyme E2PROSITEPS50127UBC_2coord: 223..368
score: 35.23238
IPR000608Ubiquitin-conjugating enzyme E2CDDcd00195UBCccoord: 227..336
e-value: 3.60371E-33
score: 118.844
IPR016135Ubiquitin-conjugating enzyme/RWD-likeGENE3D3.10.110.10Ubiquitin Conjugating Enzymecoord: 223..367
e-value: 2.4E-38
score: 133.0
IPR016135Ubiquitin-conjugating enzyme/RWD-likeSUPERFAMILY54495UBC-likecoord: 209..338

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Contig_108contigContig_108:175605..181268 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Tribonema minus UTEX_B_31562021-06-17
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
jgi.p|Trimin1|6109mRNA_15554Tribonema minus UTEX_B_3156 mRNAContig_108 175530..181319 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Trimin1|6109|CE6108_193 ID=Trimin1|6109|CE6108_193|Name=jgi.p|Trimin1|6109|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=369bp
MLPLVSAALGGSSSRRDSGWSRRSVTRHTCILALLAACMLLASSGVGAAA
VAAAGDSTYGLRKSIGRAALTGKPGAEECNASDQSSIVLAARRRSQALVS
ERRAKGVLSQRLREPKASREWREQRGLMLRGGGKGSLSKFQLFMQIFIPG
YGEDAAGDDGDGKAALTSAQPGLAKRVKRFLSALFSGGKKQPTKGAKGGK
GKGGSSKDDTVGKHLASKHRPGDANYRIQKELQEFMKNPPEGCQVSVGKS
LKVWIITITGAKGTIFEGEKFKLRVGFPENYPLKPPSVYFLQDPPPPEHE
HVYTNGDICLSLLGKDWTPNLTASALALSILSMLSSAKEKRRPADNFQNA
NRRPGQSQDSWIYHDNFS*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR000608UBQ-conjugat_E2
IPR016135UBQ-conjugating_enzyme/RWD