Trimin1|59362|CE59361_31485 (polypeptide) Tribonema minus UTEX_B_3156

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
Namejgi.p|Trimin1|59362
Unique NameTrimin1|59362|CE59361_31485
Typepolypeptide
OrganismTribonema minus UTEX_B_3156 (Tribonema minus UTEX_B_3156 )
Sequence length176
Homology
BLAST of jgi.p|Trimin1|59362 vs. uniprot
Match: A0A836CFU4_9STRA (Proton_antipo_M domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CFU4_9STRA)

HSP 1 Score: 320 bits (821), Expect = 2.420e-110
Identity = 175/175 (100.00%), Postives = 175/175 (100.00%), Query Frame = 0
Query:    1 MTYIFPEIFLGSSLLLLLIGGSILGSSPKYNYPIICFHSLTCLILIWVIFLMNADIDNSKIITNYFIVDTLSNNAKIIMSIGLLACLCIGKNKKIKIFEYYVLILLGFLGLCFLTISYDIISVYLSLELITLSFYILATFQRSSVFSTEAGLKYFLLGAISSALLLFGASFFIFI 175
            MTYIFPEIFLGSSLLLLLIGGSILGSSPKYNYPIICFHSLTCLILIWVIFLMNADIDNSKIITNYFIVDTLSNNAKIIMSIGLLACLCIGKNKKIKIFEYYVLILLGFLGLCFLTISYDIISVYLSLELITLSFYILATFQRSSVFSTEAGLKYFLLGAISSALLLFGASFFIFI
Sbjct:    1 MTYIFPEIFLGSSLLLLLIGGSILGSSPKYNYPIICFHSLTCLILIWVIFLMNADIDNSKIITNYFIVDTLSNNAKIIMSIGLLACLCIGKNKKIKIFEYYVLILLGFLGLCFLTISYDIISVYLSLELITLSFYILATFQRSSVFSTEAGLKYFLLGAISSALLLFGASFFIFI 175          
BLAST of jgi.p|Trimin1|59362 vs. uniprot
Match: A0A140F2M8_9STRA (NADH dehydrogenase subunit 2 n=1 Tax=Trachydiscus minutus TaxID=1032745 RepID=A0A140F2M8_9STRA)

HSP 1 Score: 126 bits (317), Expect = 4.580e-31
Identity = 83/174 (47.70%), Postives = 112/174 (64.37%), Query Frame = 0
Query:    5 FPEIFLGSSLLLLLIGGSILGSSPKYNYPIIC----FHSLTCLILIWVIFLMNADIDNSKIITNYFIVDTLSNNAKIIMSIGLLACLCIGKN----KKIKIFEYYVLILLGFLGLCFLTISYDIISVYLSLELITLSFYILATFQRSSVFSTEAGLKYFLLGAISSALLLFGAS 170
            FPEIFL  ++LL++I G  L +S  YNYP+I     F +L CL L  ++ LMN  +D + +    F+ D LS  AK+ +      CL + ++     +I  +EY++LIL   LGL  LT SYD++S YL++EL  LSFY+LA FQR SVFSTEAGLKYF+LGA SS LLL+  S
Sbjct:   15 FPEIFLAFAILLIMIYGVFLATSISYNYPLISRNIYFLTLYCLFLTILLTLMNP-VDFAVVFQKTFVHDDLSRIAKLFVLGSSFCCLLLSQSYLERAQINNYEYFLLILFSVLGLDLLTSSYDLLSAYLAIELQALSFYVLAAFQRKSVFSTEAGLKYFILGAFSSGLLLYSFS 187          
BLAST of jgi.p|Trimin1|59362 vs. uniprot
Match: A0A0K2RX70_9STRA (NADH dehydrogenase subunit 2 n=1 Tax=Triparma laevis TaxID=1534972 RepID=A0A0K2RX70_9STRA)

HSP 1 Score: 123 bits (309), Expect = 7.050e-30
Identity = 79/177 (44.63%), Postives = 119/177 (67.23%), Query Frame = 0
Query:    6 PEIFLGSSLLLLLIGGSILGSSPKYNYPII----CFHSLTCLILIWVIFLMN--ADIDNSKIITN-YFIVDTLSNNAKIIMSIGLLACLCIGK----NKKIKIFEYYVLILLGFLGLCFLTISYDIISVYLSLELITLSFYILATFQRSSVFSTEAGLKYFLLGAISSALLLFGASF 171
            PE+FL ++LL L+I G +L ++ +YN+P++     + S+  L L +++ L N    + NS II N  FI D LS+  K  + +G ++CL I +    N ++  FEY++LIL   LGL  L  S D+IS YL++E+ +LSFY+LA F+R+S FSTEAGLKYF+LGA SS L+LFG+++
Sbjct:   22 PELFLVTALLSLVIYGPVLANTSRYNFPLLNRGLSWLSILILFLTFILLLNNPFVTVPNSTIIFNGSFISDNLSHYGKCAILLGTISCLLISQDFVDNLRLNFFEYHLLILSAVLGLLLLVSSNDLISAYLAIEMQSLSFYVLAAFKRNSAFSTEAGLKYFILGAFSSGLILFGSTY 198          
BLAST of jgi.p|Trimin1|59362 vs. uniprot
Match: A0A649UDD9_AURAN (NADH dehydrogenase subunit 2 n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=A0A649UDD9_AURAN)

HSP 1 Score: 122 bits (305), Expect = 2.360e-29
Identity = 76/173 (43.93%), Postives = 111/173 (64.16%), Query Frame = 0
Query:    6 PEIFLGSSLLLLLIGGSILGSSPKYNYPII----CFHSLTCLILIWVIFLMNADIDNSKIITNYFIVDTLSNNAKIIMSIGLLACLCIG----KNKKIKIFEYYVLILLGFLGLCFLTISYDIISVYLSLELITLSFYILATFQRSSVFSTEAGLKYFLLGAISSALLLFGAS 170
            PE FL +++L L++ GS+   S +YNYP+I    C+ ++  L+  +++ L   ++ +S I    FI D LS NAK+ +    + CL I     +N ++  FEY++LILL   GL  L  S+D+ISVYL++EL +L  Y+LA F R S +STEAGLKYF+LGA +S LLLFG S
Sbjct:   16 PEFFLVTAILTLVLYGSVYSVSKEYNYPLINVSTCWATIFTLVNTFILVLFTREV-SSVIFNGTFICDLLSQNAKLFVIGATIVCLLISIPYVRNYQVNSFEYFLLILLAVFGLMLLCSSFDLISVYLAIELQSLCLYVLAAFNRESAYSTEAGLKYFILGAFASGLLLFGMS 187          
BLAST of jgi.p|Trimin1|59362 vs. uniprot
Match: K9ZVI5_9STRA (NADH dehydrogenase subunit 2 n=11 Tax=Monodopsidaceae TaxID=425072 RepID=K9ZVI5_9STRA)

HSP 1 Score: 120 bits (300), Expect = 1.190e-28
Identity = 82/173 (47.40%), Postives = 108/173 (62.43%), Query Frame = 0
Query:    5 FPEIFLGSSLLLLLIGGSILGSSPKYNYPIIC--FHSLTCLILIWVIFL-MNADIDNSKIITNYFIVDTLSNNAKIIMSIGLLACLCIGK----NKKIKIFEYYVLILLGFLGLCFLTISYDIISVYLSLELITLSFYILATFQRSSVFSTEAGLKYFLLGAISSALLLFGAS 170
            FPEIFL  ++L++LI G +L +S  YNYP+I    + L   IL     L M   ID + I    F+ D L+  AK+ +     ACL + +    N +I  +EY++LIL    GL  L  SYD+IS YL++EL  LSFY+LA+FQR SVFSTEAGLKYF+LGA SS LLL+  S
Sbjct:   15 FPEIFLSLAILIVLIYGVLLATSLTYNYPLISKNIYKLVLFILFLTSLLTMYNPIDYALIFQKTFVHDDLTRVAKLFVLGSSFACLLLFQSYIENSQINNYEYFLLILFSIFGLNLLVSSYDLISAYLAIELQALSFYVLASFQRQSVFSTEAGLKYFILGAFSSGLLLYAFS 187          
BLAST of jgi.p|Trimin1|59362 vs. uniprot
Match: A0A7U0KSI5_9STRA (NADH dehydrogenase subunit 2 n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A7U0KSI5_9STRA)

HSP 1 Score: 117 bits (293), Expect = 1.160e-27
Identity = 74/173 (42.77%), Postives = 108/173 (62.43%), Query Frame = 0
Query:    6 PEIFLGSSLLLLLIGGSILGSSPKYNYPII----CFHSLTCLILIWVIFLMNADIDNSKIITNYFIVDTLSNNAKIIMSIGLLACLCIG----KNKKIKIFEYYVLILLGFLGLCFLTISYDIISVYLSLELITLSFYILATFQRSSVFSTEAGLKYFLLGAISSALLLFGAS 170
            PE FL +++L +++ GS    S ++NYP+I    C+ S+  L+  + + +   D+ +  I    FI D LS N+K+ +    + CL I     +N K+  FEY++LILL   GL  L  S+D+ISVYL++EL +L  Y+LA F R S +STEAGLKYF+LGA +S LLLFG S
Sbjct:   16 PEFFLVTAILTIVLYGSFYSVSREHNYPLINVSTCWASVFTLVNTFFLIVFTRDV-SGIIFNGTFICDLLSQNSKLFIIAATIVCLLISLPYIRNYKVNSFEYFLLILLSVFGLMLLCSSFDLISVYLAIELQSLCLYVLAAFNRESAYSTEAGLKYFILGAFASGLLLFGIS 187          
BLAST of jgi.p|Trimin1|59362 vs. uniprot
Match: A0A140F2V9_9STRA (NADH dehydrogenase subunit 2 n=1 Tax=Monodopsis sp. MarTras21 TaxID=1745953 RepID=A0A140F2V9_9STRA)

HSP 1 Score: 117 bits (292), Expect = 1.590e-27
Identity = 78/175 (44.57%), Postives = 112/175 (64.00%), Query Frame = 0
Query:    5 FPEIFLGSSLLLLLIGGSILGSSPKYNYPIICFHSLTCLILIWVIFL-----MNADIDNSKIITNYFIVDTLSNNAKIIMSIGLLACLCIGK----NKKIKIFEYYVLILLGFLGLCFLTISYDIISVYLSLELITLSFYILATFQRSSVFSTEAGLKYFLLGAISSALLLFGAS 170
            FPEIF   ++L++L+ G ++ +S  YNYP+I   ++  L+L +VIFL     +N  +D + I    F+ D LS  AK+ +     ACL + +    N +I  +EY++LIL    GL  L  S D+IS YL++E+  LSFY++A+FQR SVFSTEAGLKYF+LGA SS LLL+  S
Sbjct:   15 FPEIFFSLAILIVLVYGVLVATSLTYNYPLIS-RNIYALVL-YVIFLTGLLVLNNPVDYALIFQKTFLHDDLSRIAKLFVLGSAFACLILSQSYVENSQINNYEYFLLILFSIFGLNLLISSNDLISAYLAIEMQALSFYVMASFQRRSVFSTEAGLKYFILGAFSSGLLLYAFS 187          
BLAST of jgi.p|Trimin1|59362 vs. uniprot
Match: A0A2E3M7F9_9RICK (NADH-quinone oxidoreductase subunit N n=2 Tax=cellular organisms TaxID=131567 RepID=A0A2E3M7F9_9RICK)

HSP 1 Score: 114 bits (284), Expect = 2.200e-26
Identity = 70/174 (40.23%), Postives = 115/174 (66.09%), Query Frame = 0
Query:    5 FPEIFLGSSLLLLLIGGSILGSSPKYNYPIICFHSLTCL----ILIWVIFLMNADIDNSKIITNYFIVDTLSNNAKIIMSIGLLACLCIG----KNKKIKIFEYYVLILLGFLGLCFLTISYDIISVYLSLELITLSFYILATFQRSSVFSTEAGLKYFLLGAISSALLLFGAS 170
            FPE+FL  ++  LL+ G I  +S KYN  +I   ++  L    ++I V+ ++N  I+N  I  +  I+D  SN  K+I+SI  + C+ +     K++K+  FEY +++LL  LG+  +T S+++IS+YL++EL +LS Y++A ++R++ FSTEAGLKYF+LGA++S  LL G S
Sbjct:   15 FPELFLSLAIFGLLVFGVIYSTSEKYN-KVILVKTINWLAIQTLVITVVLILNNPINNIVIFNDLLIIDDFSNAIKVIVSISSICCILLSFEYLKDEKLYAFEYGLILLLAILGIFLITSSHNLISMYLAIELQSLSLYVIAAYKRNTKFSTEAGLKYFILGALASGFLLIGCS 187          
BLAST of jgi.p|Trimin1|59362 vs. uniprot
Match: M4QBP4_ANDGO (NADH dehydrogenase subunit 2 n=1 Tax=Andalucia godoyi TaxID=505711 RepID=M4QBP4_ANDGO)

HSP 1 Score: 113 bits (283), Expect = 2.970e-26
Identity = 72/175 (41.14%), Postives = 111/175 (63.43%), Query Frame = 0
Query:    3 YIFPEIFLGSSLLLLLIGGSILGSSPKYNYPIICFHSLTCLIL---IWVIFLMNADIDNSKIITNYFIVDTLSNNAKIIMSIGLLACLCIG----KNKKIKIFEYYVLILLGFLGLCFLTISYDIISVYLSLELITLSFYILATFQRSSVFSTEAGLKYFLLGAISSALLLFGAS 170
            Y+ PEIF  +++L+LL+ G I  +S ++ YPI+  + +   +L     V+ ++N     + I  N  I+D  S  AK+++ +  +A L +     +++KI  FEY +LI+L  LG+  +  SYD+IS+YL+LE  +L  Y+LA  +R S FSTEAGLKYF+LGA SS +LLFGAS
Sbjct:   11 YVLPEIFCLTAVLVLLVYGVIYSTSSQHGYPILSRNVVWLAVLSLFFTVLLILNQSYLEASIFHNTLIIDFFSQFAKLVILLSAIASLLLSLDYLRSQKINSFEYAILIVLSTLGMLLMVSSYDLISMYLALEFQSLCLYVLAALKRHSEFSTEAGLKYFILGAFSSGILLFGAS 185          
BLAST of jgi.p|Trimin1|59362 vs. uniprot
Match: A0A873HVZ7_PROWI (Nad2 n=1 Tax=Prototheca wickerhamii TaxID=3111 RepID=A0A873HVZ7_PROWI)

HSP 1 Score: 113 bits (282), Expect = 4.580e-26
Identity = 79/177 (44.63%), Postives = 111/177 (62.71%), Query Frame = 0
Query:    4 IFPEIFLGSSLLLLLIGGSILGSSPKYNYPIICFHS--LTCLILIWVIFLM-NADIDNSKIITNYFIVDTLSNNAKIIMSIGLLACLCIG-------KNKKIKIFEYYVLILLGFLGLCFLTISYDIISVYLSLELITLSFYILATFQRSSVFSTEAGLKYFLLGAISSALLLFGAS 170
            +FPEIFL S+ + LLI G I  +S   NYP++ ++    T L L++  FL+ N+ I+N+ I  N  +VD  +   KI+    LL+  C+        K +++  FE  +LI+     + FLT S D IS+YL++EL +LSFY+LA  +R+S FSTEAGLKYFLLGA SS LLLFG S
Sbjct:   25 LFPEIFLVSTGIFLLIYGVITSTSKSLNYPLLSYNISWFTILTLLYTAFLIWNSPINNAVIFYNTLVVDDWTQFVKIV---ALLSSACVVAMSLQYIKTERLNAFEALILIIFAVSSMLFLTSSADFISLYLAIELQSLSFYVLAALKRNSEFSTEAGLKYFLLGAFSSGLLLFGMS 198          
The following BLAST results are available for this feature:
BLAST of jgi.p|Trimin1|59362 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A836CFU4_9STRA2.420e-110100.00Proton_antipo_M domain-containing protein n=1 Tax=... [more]
A0A140F2M8_9STRA4.580e-3147.70NADH dehydrogenase subunit 2 n=1 Tax=Trachydiscus ... [more]
A0A0K2RX70_9STRA7.050e-3044.63NADH dehydrogenase subunit 2 n=1 Tax=Triparma laev... [more]
A0A649UDD9_AURAN2.360e-2943.93NADH dehydrogenase subunit 2 n=1 Tax=Aureococcus a... [more]
K9ZVI5_9STRA1.190e-2847.40NADH dehydrogenase subunit 2 n=11 Tax=Monodopsidac... [more]
A0A7U0KSI5_9STRA1.160e-2742.77NADH dehydrogenase subunit 2 n=1 Tax=Pelagomonas c... [more]
A0A140F2V9_9STRA1.590e-2744.57NADH dehydrogenase subunit 2 n=1 Tax=Monodopsis sp... [more]
A0A2E3M7F9_9RICK2.200e-2640.23NADH-quinone oxidoreductase subunit N n=2 Tax=cell... [more]
M4QBP4_ANDGO2.970e-2641.14NADH dehydrogenase subunit 2 n=1 Tax=Andalucia god... [more]
A0A873HVZ7_PROWI4.580e-2644.63Nad2 n=1 Tax=Prototheca wickerhamii TaxID=3111 Rep... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001750NADH:quinone oxidoreductase/Mrp antiporter, membrane subunitPFAMPF00361Proton_antipo_Mcoord: 117..171
e-value: 3.7E-10
score: 39.5
NoneNo IPR availablePANTHERPTHR22773NADH DEHYDROGENASEcoord: 7..172
NoneNo IPR availablePANTHERPTHR22773:SF41NADH-UBIQUINONE OXIDOREDUCTASE CHAIN 2coord: 7..172

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Contig_33contigContig_33:883025..883552 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Tribonema minus UTEX_B_31562021-06-17
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
jgi.p|Trimin1|59362mRNA_6000Tribonema minus UTEX_B_3156 mRNAContig_33 882991..883845 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Trimin1|59362|CE59361_31485 ID=Trimin1|59362|CE59361_31485|Name=jgi.p|Trimin1|59362|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=176bp
MTYIFPEIFLGSSLLLLLIGGSILGSSPKYNYPIICFHSLTCLILIWVIF
LMNADIDNSKIITNYFIVDTLSNNAKIIMSIGLLACLCIGKNKKIKIFEY
YVLILLGFLGLCFLTISYDIISVYLSLELITLSFYILATFQRSSVFSTEA
GLKYFLLGAISSALLLFGASFFIFI*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001750ND/Mrp_mem