Trimin1|58800|CE58799_53 (polypeptide) Tribonema minus UTEX_B_3156

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	jgi.p\|Trimin1\|58800
Unique Name	Trimin1\|58800\|CE58799_53
Type	polypeptide
Organism	Tribonema minus UTEX_B_3156 (Tribonema minus UTEX_B_3156 )
Sequence length	211

Homology

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BLAST of jgi.p|Trimin1|58800 vs. uniprot
Match: A0A836CDZ8_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CDZ8_9STRA)

HSP 1 Score: 417 bits (1072), Expect = 1.870e-147
Identity = 210/210 (100.00%), Postives = 210/210 (100.00%), Query Frame = 0

Query:    1 MTGSERAAAAAAAVEARWMHGATIKPGCLAMLRDDVVPAVVATEGLRGLKLETAVTGHEAYVVTLSLPDPQREGQWVRAKAAAYAAVQATCKVYPLFPLEFKPYQKDLVGEEFGHGPGPALRQQMSGEQFKEWLSKNVDEGLHPLGKAWDTGVTLRDIVNAFTAPTATVATFLAFVERATAAERQLSPMQRCALFEVAFSKAGIYFGEAP 210
            MTGSERAAAAAAAVEARWMHGATIKPGCLAMLRDDVVPAVVATEGLRGLKLETAVTGHEAYVVTLSLPDPQREGQWVRAKAAAYAAVQATCKVYPLFPLEFKPYQKDLVGEEFGHGPGPALRQQMSGEQFKEWLSKNVDEGLHPLGKAWDTGVTLRDIVNAFTAPTATVATFLAFVERATAAERQLSPMQRCALFEVAFSKAGIYFGEAP
Sbjct:    1 MTGSERAAAAAAAVEARWMHGATIKPGCLAMLRDDVVPAVVATEGLRGLKLETAVTGHEAYVVTLSLPDPQREGQWVRAKAAAYAAVQATCKVYPLFPLEFKPYQKDLVGEEFGHGPGPALRQQMSGEQFKEWLSKNVDEGLHPLGKAWDTGVTLRDIVNAFTAPTATVATFLAFVERATAAERQLSPMQRCALFEVAFSKAGIYFGEAP 210

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BLAST of jgi.p|Trimin1|58800 vs. uniprot
Match: A0A835Z9S7_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z9S7_9STRA)

HSP 1 Score: 54.7 bits (130), Expect = 3.310e-5
Identity = 23/43 (53.49%), Postives = 31/43 (72.09%), Query Frame = 0

Query:  121 LRQQMSGEQFKEWLSKNVDEGLHPLGKAWDTGVTLRDIVNAFT 163
            L ++++G QFKEWL+ N  EGL PLG+AWD      DI++AFT
Sbjct:   18 LSRELTGPQFKEWLTNNPSEGLRPLGEAWDPNSCASDIIDAFT 60

The following BLAST results are available for this feature:

BLAST of jgi.p|Trimin1|58800 vs. uniprot

BLAST of jgi.p|Trimin1|58800 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2


Match Name	E-value	Identity	Description
A0A836CDZ8_9STRA	1.870e-147	100.00	Uncharacterized protein n=1 Tax=Tribonema minus Ta...	[more]
A0A835Z9S7_9STRA	3.310e-5	53.49	Uncharacterized protein n=1 Tax=Tribonema minus Ta...	[more]

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
Contig_33	contig	Contig_33:33139..35791 +

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-09-29
Diamond blastp: OGS1.0 vs UniRef90	2022-09-16
OGS1.0 of Tribonema minus UTEX_B_3156	2021-06-17

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
jgi.p\|Trimin1\|58800	mRNA_5890	Tribonema minus UTEX_B_3156	mRNA	Contig_33 32322..36018 +

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>Trimin1|58800|CE58799_53 ID=Trimin1|58800|CE58799_53|Name=jgi.p|Trimin1|58800|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=211bp
MTGSERAAAAAAAVEARWMHGATIKPGCLAMLRDDVVPAVVATEGLRGLK
LETAVTGHEAYVVTLSLPDPQREGQWVRAKAAAYAAVQATCKVYPLFPLE
FKPYQKDLVGEEFGHGPGPALRQQMSGEQFKEWLSKNVDEGLHPLGKAWD
TGVTLRDIVNAFTAPTATVATFLAFVERATAAERQLSPMQRCALFEVAFS
KAGIYFGEAP*