Trimin1|57321|CE57320_991 (polypeptide) Tribonema minus UTEX_B_3156

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
Namejgi.p|Trimin1|57321
Unique NameTrimin1|57321|CE57320_991
Typepolypeptide
OrganismTribonema minus UTEX_B_3156 (Tribonema minus UTEX_B_3156 )
Sequence length246
Homology
BLAST of jgi.p|Trimin1|57321 vs. uniprot
Match: A0A835YYY9_9STRA (Proteasome activator pa28 n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YYY9_9STRA)

HSP 1 Score: 455 bits (1171), Expect = 2.210e-161
Identity = 245/245 (100.00%), Postives = 245/245 (100.00%), Query Frame = 0
Query:    1 MEALKEQSKSEGEAAREVVPTFVAHLNESLASNFAYTDLSQIESSFTAAVAAAGSVPATNDKLAKLLPAVQSDLATSINILLALYRWIQVHVPIIEDGNNFGVGVQQEVAKLIAESVTKLEAAFDKLPEYHEKRAGAWEKLAAKEDSTAKKSTSKSTVTGGKEGDENKTTVTESNDTSSSTSRQIPDGLRALVTMDVRCYVQLHKSIQLARDTVLFCADMVEKNVTKIKAPKGDAGRHGAPGFMF 245
            MEALKEQSKSEGEAAREVVPTFVAHLNESLASNFAYTDLSQIESSFTAAVAAAGSVPATNDKLAKLLPAVQSDLATSINILLALYRWIQVHVPIIEDGNNFGVGVQQEVAKLIAESVTKLEAAFDKLPEYHEKRAGAWEKLAAKEDSTAKKSTSKSTVTGGKEGDENKTTVTESNDTSSSTSRQIPDGLRALVTMDVRCYVQLHKSIQLARDTVLFCADMVEKNVTKIKAPKGDAGRHGAPGFMF
Sbjct:    1 MEALKEQSKSEGEAAREVVPTFVAHLNESLASNFAYTDLSQIESSFTAAVAAAGSVPATNDKLAKLLPAVQSDLATSINILLALYRWIQVHVPIIEDGNNFGVGVQQEVAKLIAESVTKLEAAFDKLPEYHEKRAGAWEKLAAKEDSTAKKSTSKSTVTGGKEGDENKTTVTESNDTSSSTSRQIPDGLRALVTMDVRCYVQLHKSIQLARDTVLFCADMVEKNVTKIKAPKGDAGRHGAPGFMF 245          
BLAST of jgi.p|Trimin1|57321 vs. uniprot
Match: H6WB99_VAULI (BED-type domain-containing protein n=1 Tax=Vaucheria litorea TaxID=109269 RepID=H6WB99_VAULI)

HSP 1 Score: 219 bits (557), Expect = 4.230e-67
Identity = 120/242 (49.59%), Postives = 163/242 (67.36%), Query Frame = 0
Query:    1 MEALKEQSKSEGEAAREVVPTFVAHLNESLASNFAYTDLSQIESSFTAAVAAAGSV--PATNDKLAKLLPAVQSDLATSINILLALYRWIQVHVPIIEDGNNFGVGVQQEVAKLIAESVTKLEAAFDKLPEYHEKRAGAWEKLAAKEDSTAKKSTSKSTVTGGKEGDENKTTVTESNDTSSSTSRQIPDGLRALVTMDVRCYVQLHKSIQLARDTVLFCADMVEKNVTKIKAPKGDAGRHGA 240
            ME LK   K EG+  RE+VP+ +  L++ L  +F+YTDL  IE +F   V A  S   P  N+KL  L+  V+S +  +IN L +L  WI+ HVP IEDGNNFGVGVQ EV K I+ES+ KL+AAF+ LPEYHEKR+  WEKL  K ++  KKST          G+E+K+TVT+S D S+ST +Q+PD LR +V +D++CYV LH  +QL+RD++ F A++VE N+ K+ APKG+A R  A
Sbjct:   79 METLKSSIKDEGKVIREIVPSLIKELDKILQYDFSYTDLLSIEKTFADDVLANASQNQPQVNEKLCSLISLVRSKMVLAINTLFSLKMWIRAHVPAIEDGNNFGVGVQYEVTKNISESIEKLQAAFNTLPEYHEKRSAVWEKLIGKSETVTKKST----------GNEDKSTVTQSTDESNSTGKQLPDSLRTIVALDLKCYVNLHSHLQLSRDSLFFSANLVELNIGKLVAPKGEADRRAA 310          
BLAST of jgi.p|Trimin1|57321 vs. uniprot
Match: D7G5E6_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G5E6_ECTSI)

HSP 1 Score: 155 bits (392), Expect = 3.580e-43
Identity = 94/233 (40.34%), Postives = 137/233 (58.80%), Query Frame = 0
Query:    1 MEALKEQSKSEGEAAREVVPTFVAHLNESLASNFAYTDLSQIESSFTAAVAAAGSVPATNDKLAKLLPAVQSDLATSINILLALYRWIQVHVPIIEDGNNFGVGVQQEVAKLIAESVTKLEAAFDKLPEYHEKRAGAWEKLAAKEDSTAKKSTSKSTVTGGKEGDENKTTVTESNDTSSSTSRQIPDGLRALVTMDVRCYVQLHKSIQLARDTVLFCADMVEKNVTKIKAPKG 233
            M +L   S  EGE A   +P  V  +   L + FAYT L+ IES F   + ++G     N  +  LL  V++++  +++ILLAL RWI+V VP IEDGNNFGV VQ +VAK I E  T + ++  ++P Y E RA AW+K+  K+   +K S+S S  TGGK+GD          +  +S S   PD    L+ +DV+ +V LH ++  ARD+++  ADM+EKN+ K+  PKG
Sbjct:    1 MSSLTAISVREGEVALANLPEQVGKMQALLEAEFAYTSLADIESGFKQLLTSSGGSATENANMGALLSTVRNEVTQTMSILLALKRWIRVQVPKIEDGNNFGVSVQLDVAKGIDELTTPVASSLGEMPGYFESRASAWDKIGNKKSKESKTSSSASKDTGGKDGDSXXXXXXXXTEEKTSESSFAPDSANHLIALDVKWFVSLHHTLLRARDSLVLAADMIEKNMEKLLRPKG 233          
BLAST of jgi.p|Trimin1|57321 vs. uniprot
Match: A0A485KK80_9STRA (Aste57867_8360 protein n=1 Tax=Aphanomyces stellatus TaxID=120398 RepID=A0A485KK80_9STRA)

HSP 1 Score: 130 bits (327), Expect = 1.570e-33
Identity = 86/219 (39.27%), Postives = 130/219 (59.36%), Query Frame = 0
Query:   19 VPTFVAHLNESLASNFAYTDLSQIESSFTAAVAAAGSVPATNDKLAKLLPAVQSDLATSINILLALYRWIQVHVPIIEDGNNFGVGVQQEVAKLIAESVTKLEAAFDKLPEYHEKRAGAWEKLAAKEDSTAKKSTSKSTVTGGKEGDENKTTVTESNDTSSSTSRQIPDGLRALVTMDVRCYVQLHKSIQLARDTVLFCADMVEKNVTKIKAPKGDAGR 237
            +P  +AH+ E L+S F     SQ+ ++F   V A     ATN  L +L+  V  ++  +I  L  L RWIQ+ +P + DGNNFGV VQ+ V   I+ S T L+ ++D + +Y+ +RA A+EK AAK+ +  K + S +   GGK+G+ +K +  ES+D SSS SR IPD +  +V +DV+ Y  L ++++   D   F  D VEKN +KIK P+G   R
Sbjct:   19 IPKRMAHITELLSSEFQAQTPSQLTTAFAPGVTAQA---ATNPHLCRLVTLVLDEIHVAIQELQRLERWIQLLIPRVADGNNFGVEVQKTVQLQISASRTALQKSWDGMTDYYWQRATAYEKFAAKKSTDTKVTNSTTHEEGGKDGNVSKKSRIESSDESSSESRVIPDLIAYVVAVDVKWYFNLQRTLESIGDHYAFTLDAVEKNSSKIKLPRGHGER 234          
BLAST of jgi.p|Trimin1|57321 vs. uniprot
Match: A0A7S2V475_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2V475_9STRA)

HSP 1 Score: 119 bits (297), Expect = 4.170e-29
Identity = 86/232 (37.07%), Postives = 124/232 (53.45%), Query Frame = 0
Query:    8 SKSEGEAAREVVPTFVAHLNESLASNFAYTDLSQIESSFTAAVAAAGSVPATNDKLAKLLPAVQSDLATSINILLALYRWIQVHVPIIEDGNNFGVGVQQEVAKLIAESVTKLEAAFDKLPEYHEKRAGAWEKLAAKEDSTAKKSTSKSTVTGGKEGDENKTTVTESNDTSSSTSRQ--IPDGLRALVTMDVRCYVQLHKSIQLARDTVLFCADMVEKNVTKIKAPKGDAGR 237
            +K+E  A  + +P  VA ++  LA+ F  T L+++E SF  A+ +  S PA+N  +  ++ +V+S++A S+  L  L RWI +  P  EDGNNFGV VQQ+V K I   + KLE      PEY ++RA   EK+A K   T   S SK       +G E K   TE+ D  S  +R   IPD    L+ +D++ Y  +   I  ARD +L    ++ KN  KI  PKG   R
Sbjct:    7 AKNEAAALMQQMPQKVADMSNILATKFVATSLTEVEQSFKEAMGST-SEPASNAVMVDIVSSVRSEVAFSLKCLQILSRWIWLMTPEAEDGNNFGVHVQQDVLKTIGTWIEKLEKELKLAPEYFKERAAVAEKMAPKISRTKTVSKSKKN-----DGSETKEESTEAEDEKSEEARSPAIPDQAAHLLAIDLQYYTLMEMGISSARDALLIVEHIISKNEKKITEPKGSEKR 232          
BLAST of jgi.p|Trimin1|57321 vs. uniprot
Match: A0A4D9DB27_9STRA (PA28_beta domain-containing protein n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9DB27_9STRA)

HSP 1 Score: 112 bits (280), Expect = 1.410e-26
Identity = 76/221 (34.39%), Postives = 118/221 (53.39%), Query Frame = 0
Query:   16 REVVPTFVAHLNESLASNFAYTDLSQIESSFTAAVAAAGSVPATNDKLAKLLPAVQSDLATSINILLALYRWIQVHVPIIEDGNNFGVGVQQEVAKLIAESVTKLEAAFDKLPEYHEKRAGAWEKLAAKEDSTAKKSTSKSTVTGGKEGDENKTTVTESNDTSSSTSRQIPDGLRALVTMDVRCYVQLHKSIQLARDTVLFCADMVEKNVTKIKAPKGDAG 236
            R V+P  +A +   L +      +S++ +   AAVAA       N +++  L   +  L  ++  L  +  W+++ VP + DG NFGV V  EV K I   V  L    D+LP Y  +RA A EKL A+  +  K+S SKS+ TGGK+GDE K + +++ + S   S  +PD L  LV +D + +    + ++L     L C D++EKN T + AP+GD G
Sbjct:   18 RSVMPARIAEVEAVLQAVPFGKSVSEVMTHSRAAVAA-------NAEVSGSLGTARDVLLRTVEDLHLVCTWLKLKVPKVSDGGNFGVAVILEVVKTIEGKVEVLNKGLDELPNYFSERASAVEKLVARTSTDVKESKSKSSTTGGKDGDETKGSESQTEEKSIKKSEFLPDQLEHLVALDAKFFTIFKRDVELCHSAYLTCFDILEKNFTLLNAPRGDKG 231          
BLAST of jgi.p|Trimin1|57321 vs. uniprot
Match: A0A067CUD4_SAPPC (PA28_beta domain-containing protein n=2 Tax=Saprolegnia TaxID=4769 RepID=A0A067CUD4_SAPPC)

HSP 1 Score: 110 bits (276), Expect = 5.450e-26
Identity = 77/227 (33.92%), Postives = 124/227 (54.63%), Query Frame = 0
Query:   19 VPTFVAHLNESLASNFAYTDLSQIESSFTAAVAAAGSVPATNDKLAKLLPAVQSDLATSINILLALYRWIQVHVPIIEDGNNFGVGVQQEVAKLIAESVTKLEAAFDKLPEYHEKRAGAWEKLAAKEDSTAKKSTSKSTVTGGKEGDENKTTVTESNDTSSSTSRQIPDGLRALVTMDVRCYVQLHKSIQLARDTVLFCADMVEKNVTKIKAPKGDAGRHGAPGFMF 245
            +P  +  + E LA  F  +  SQ  ++F   V      P +N +L  L+  V  ++ T+I  + +L RWIQ+ VP + DGNNFGV VQ+ V   I+ S T L+ A+D + +Y+ +RA A+EK AAK  S    + S +   GGK+GD  K +  +++ T++S++  + D +  +  +DV+ Y  L ++++   D   +  D VEKN  KIK P+G    HG  G   
Sbjct:   19 IPVHMDRIAEVLAREFPASSPSQAYAAFAPLVTL--DAP-SNARLVHLIQIVLDEIHTAIQKMQSLERWIQLLVPKVADGNNFGVEVQKSVQLQISASRTALQKAWDGMTDYYWQRATAYEKFAAKHASEKTNTISTTAEVGGKDGDVTKKSTVDADKTTASSATPLADLVSYVAAVDVKWYFNLQRTLESVGDHYAYTLDAVEKNAAKIKLPRG----HGERGMSM 238          
BLAST of jgi.p|Trimin1|57321 vs. uniprot
Match: W7U0E4_9STRA (Proteasome activator subunit 1 n=1 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7U0E4_9STRA)

HSP 1 Score: 112 bits (280), Expect = 7.450e-26
Identity = 75/221 (33.94%), Postives = 118/221 (53.39%), Query Frame = 0
Query:   16 REVVPTFVAHLNESLASNFAYTDLSQIESSFTAAVAAAGSVPATNDKLAKLLPAVQSDLATSINILLALYRWIQVHVPIIEDGNNFGVGVQQEVAKLIAESVTKLEAAFDKLPEYHEKRAGAWEKLAAKEDSTAKKSTSKSTVTGGKEGDENKTTVTESNDTSSSTSRQIPDGLRALVTMDVRCYVQLHKSIQLARDTVLFCADMVEKNVTKIKAPKGDAG 236
            R V+P  +A +   L +      +S++ +   AAVAA       N +++  L   +  L  ++  L  +  W+++ VP + DG NFGV V  EV K I   +  L    D+LP Y  +RA A EKL A+  +  K+S SKS+ TGGK+GDE K + +++ + S   S  +PD L  LV +D + +    + ++L     L C D++EKN T + AP+GD G
Sbjct:   99 RSVMPARIAEVEAVLQAAPFGKSVSEVMTHSRAAVAA-------NAEVSGSLGTARDVLLRTVEDLHLVCTWLKLKVPKVSDGGNFGVAVILEVVKTIEGKIEVLNKGLDELPNYFSERASAVEKLVARTSTDVKESKSKSSTTGGKDGDETKGSESQTEEKSVKKSEFLPDQLEHLVALDAKFFTIFKRDVELCHSAYLTCFDILEKNFTLLNAPRGDKG 312          
BLAST of jgi.p|Trimin1|57321 vs. uniprot
Match: A0A662Y6D6_9STRA (Uncharacterized protein n=2 Tax=Nothophytophthora sp. Chile5 TaxID=2483409 RepID=A0A662Y6D6_9STRA)

HSP 1 Score: 110 bits (274), Expect = 1.170e-25
Identity = 84/240 (35.00%), Postives = 123/240 (51.25%), Query Frame = 0
Query:    1 MEALKEQSKSEGEAAREVVPTFVAHLNESLASNFAYTDLSQIESSFTAAVAAAGSVPATNDKLAKLLPAVQSDLATSINILLALYRWIQVHVPIIEDGNNFGVGVQQEVAKLIAESVTKLEAAFDKLPEYHEKRAGAWEKLAAKEDSTAKKSTSKSTVTGGKEGDENKTTVTESNDTSSSTSRQI-PDGLRALVTMDVRCYVQLHKSIQLARDTVLFCADMVEKNVTKIKAPKGDAGRHG 239
            M+A K    + G+A    +P  VA +   L  + A    S++ ++F   V A  +    N ++  LL      +A  ++ L  L  WIQ+ VP +EDGNNFGV VQ+     + E++ K + A+D L +Y   RA A EKL AK  S +         TGGK+GDE K+ VT   D   ST  Q   D L A+V +DV+ Y  L ++++  RD     AD++ KN  KI  P+G+  R G
Sbjct:    1 MDAYKTSVAAAGDALLLELPQRVAQVQTLLQQHAAERSPSRVRAAFAQQVLATPTAVGANGQVQGLLATTSDQVALVMDALQLLQLWIQLQVPKVEDGNNFGVEVQKYAFTQLKEALEKWQKAWDALADYSSSRATAAEKLNAKLSSESXXXXXXXXXTGGKDGDEQKS-VTAKVDKQGSTGAQAGEDALAAVVELDVKWYFNLVRALEGVRDQYAVTADVIAKNKDKISLPRGNNDRAG 239          
BLAST of jgi.p|Trimin1|57321 vs. uniprot
Match: A0A5D6XIL9_9STRA (Uncharacterized protein n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6XIL9_9STRA)

HSP 1 Score: 109 bits (273), Expect = 1.650e-25
Identity = 79/240 (32.92%), Postives = 122/240 (50.83%), Query Frame = 0
Query:    1 MEALKEQSKSEGEAAREVVPTFVAHLNESLASNFAYTDLSQIESSFTAAVAAAGSVPATNDKLAKLLPAVQSDLATSINILLALYRWIQVHVPIIEDGNNFGVGVQQEVAKLIAESVTKLEAAFDKLPEYHEKRAGAWEKL---AAKEDSTAKKSTSKSTVTGGKEGDENKTTVTESNDTSSSTSRQIPDGLRALVTMDVRCYVQLHKSIQLARDTVLFCADMVEKNVTKIKAPKGDAGR 237
            M+  +    ++ E      P  V H+   +  +FA    S + ++  AA AA+      N  LA L   V  ++   +  L  L RW+Q+ VP + DGNNFGV VQ+   + + ES    +  +D L EYH +RA A EKL    AKE +T+  +T+    TGGK+ DE KT    S   +++T+  + D    +V +DV+ Y  L ++++  RD      D+VEKN  KI  P+G + R
Sbjct:    1 MDVYRATVSADAERTLAEFPRRVEHVQALVTQHFAQRQPSAVRATLAAAAAASSGQVRGNASLAALAAVVADEIELVLAALAQLSRWLQLLVPKVADGNNFGVEVQKLALEHLKESAAGWQKHWDALAEYHSQRAAAAEKLNDKVAKEKATSATTTA---TTGGKDADETKTVTMTSEKETATTAAPVEDWAAFVVAVDVKWYFNLARTLEAVRDQYAVTFDIVEKNRDKILLPRGSSDR 237          
The following BLAST results are available for this feature:
BLAST of jgi.p|Trimin1|57321 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A835YYY9_9STRA2.210e-161100.00Proteasome activator pa28 n=1 Tax=Tribonema minus ... [more]
H6WB99_VAULI4.230e-6749.59BED-type domain-containing protein n=1 Tax=Vaucher... [more]
D7G5E6_ECTSI3.580e-4340.34Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
A0A485KK80_9STRA1.570e-3339.27Aste57867_8360 protein n=1 Tax=Aphanomyces stellat... [more]
A0A7S2V475_9STRA4.170e-2937.07Hypothetical protein n=1 Tax=Fibrocapsa japonica T... [more]
A0A4D9DB27_9STRA1.410e-2634.39PA28_beta domain-containing protein n=1 Tax=Nannoc... [more]
A0A067CUD4_SAPPC5.450e-2633.92PA28_beta domain-containing protein n=2 Tax=Saprol... [more]
W7U0E4_9STRA7.450e-2633.94Proteasome activator subunit 1 n=1 Tax=Nannochloro... [more]
A0A662Y6D6_9STRA1.170e-2535.00Uncharacterized protein n=2 Tax=Nothophytophthora ... [more]
A0A5D6XIL9_9STRA1.650e-2532.92Uncharacterized protein n=1 Tax=Pythium brassicum ... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR003186Proteasome activator PA28, C-terminal domainPFAMPF02252PA28_betacoord: 58..142
e-value: 2.1E-16
score: 59.9
IPR036997Proteasome activator PA28, C-terminal domain superfamilyGENE3D1.20.120.180coord: 58..233
e-value: 2.0E-31
score: 110.6
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 152..183
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 149..183
NoneNo IPR availablePANTHERPTHR10660:SF2LD45860Pcoord: 38..234
IPR009077Proteasome activator PA28PANTHERPTHR10660PROTEASOME REGULATOR PA28coord: 38..234
IPR036252Proteasome activator superfamilySUPERFAMILY47216Proteasome activatorcoord: 23..237

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Contig_31contigContig_31:1040368..1044848 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Tribonema minus UTEX_B_31562021-06-17
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
jgi.p|Trimin1|57321mRNA_7454Tribonema minus UTEX_B_3156 mRNAContig_31 1040292..1044922 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Trimin1|57321|CE57320_991 ID=Trimin1|57321|CE57320_991|Name=jgi.p|Trimin1|57321|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=246bp
MEALKEQSKSEGEAAREVVPTFVAHLNESLASNFAYTDLSQIESSFTAAV
AAAGSVPATNDKLAKLLPAVQSDLATSINILLALYRWIQVHVPIIEDGNN
FGVGVQQEVAKLIAESVTKLEAAFDKLPEYHEKRAGAWEKLAAKEDSTAK
KSTSKSTVTGGKEGDENKTTVTESNDTSSSTSRQIPDGLRALVTMDVRCY
VQLHKSIQLARDTVLFCADMVEKNVTKIKAPKGDAGRHGAPGFMF*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR003186PA28_C
IPR036997PA28_C_sf
IPR009077Proteasome_activ_PA28
IPR036252Proteasome_activ_sf