Trimin1|54894|CE54893_112 (polypeptide) Tribonema minus UTEX_B_3156

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	jgi.p\|Trimin1\|54894
Unique Name	Trimin1\|54894\|CE54893_112
Type	polypeptide
Organism	Tribonema minus UTEX_B_3156 (Tribonema minus UTEX_B_3156 )
Sequence length	301

Homology

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BLAST of jgi.p|Trimin1|54894 vs. uniprot
Match: A0A835ZIS8_9STRA (Uncharacterized protein n=2 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZIS8_9STRA)

HSP 1 Score: 597 bits (1540), Expect = 1.900e-215
Identity = 293/300 (97.67%), Postives = 294/300 (98.00%), Query Frame = 0

Query:    1 MPACVAPSSSRELQTCGGVSEALAGVRRRDRQRLGVLGEQAESAAHHGTNHKLLAAVNGNILSGLQPAVSRDLAHQGGDALLSYIAFLSSVSAWRPVTPSAYLYDIGVHVDSHNLQFRAHHGDLGLHENFEMESAWSWVALRRVCLWGESLAALFGIPASGWGTVACGCFVGGDMGGPVNHRPAHQGGDALLSYIAFLSSVSAWRPVTPSAYLYDIGVHVDSHNLQFRAHYGDLGLHENFEMESAWSWVALRRVCLWVESLVALFGIPASMWGTVACGCFVGGDVGGGVWRASFACYIQE 300
            MPACVAPS  RELQTCGGVSEALAGVRRRDR+RLGVLGEQAESAA HGTNHKLLAAVNGNILSGLQPAVSRDLAHQGGDALLSYIAFLSSVSAWRPVTPSAYLYDIGVHVDSHNLQFRAHHGDLGLHENFEMESAWSWVALRRVCLWGESLAALFGIPAS WGTVACGCFVGGDMGGPVNHRPAHQGGDALLSYIAFLSSVSAWRPVTPSAYLYDIGVHVDSHNLQFRAHYGDLGLHENFEMESAWSWVALRRVCLW ESL ALFGIPASMWGTVACGCFVGGDVGGGVWRASFACYIQE
Sbjct:   24 MPACVAPS--RELQTCGGVSEALAGVRRRDRERLGVLGEQAESAARHGTNHKLLAAVNGNILSGLQPAVSRDLAHQGGDALLSYIAFLSSVSAWRPVTPSAYLYDIGVHVDSHNLQFRAHHGDLGLHENFEMESAWSWVALRRVCLWGESLAALFGIPASVWGTVACGCFVGGDMGGPVNHRPAHQGGDALLSYIAFLSSVSAWRPVTPSAYLYDIGVHVDSHNLQFRAHYGDLGLHENFEMESAWSWVALRRVCLWGESLAALFGIPASMWGTVACGCFVGGDVGGGVWRASFACYIQE 321

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BLAST of jgi.p|Trimin1|54894 vs. uniprot
Match: A0A836CMW0_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CMW0_9STRA)

HSP 1 Score: 122 bits (307), Expect = 1.370e-27
Identity = 65/68 (95.59%), Postives = 65/68 (95.59%), Query Frame = 0

Query:    1 MPACVAPSSSRELQTCGGVSEALAGVRRRDRQRLGVLGEQAESAAHHGTNHKLLAAVNGNILSGLQPA 68
            MPACVAPS  RELQTCGGVSEALAGVRRRDRQRLGVLGEQAESAA HGTNHKLLAAVNGNILSGLQPA
Sbjct:   24 MPACVAPS--RELQTCGGVSEALAGVRRRDRQRLGVLGEQAESAARHGTNHKLLAAVNGNILSGLQPA 89

The following BLAST results are available for this feature:

BLAST of jgi.p|Trimin1|54894 vs. uniprot

BLAST of jgi.p|Trimin1|54894 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2


Match Name	E-value	Identity	Description
A0A835ZIS8_9STRA	1.900e-215	97.67	Uncharacterized protein n=2 Tax=Tribonema minus Ta...	[more]
A0A836CMW0_9STRA	1.370e-27	95.59	Uncharacterized protein n=1 Tax=Tribonema minus Ta...	[more]

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
Contig_3	contig	Contig_3:1326007..1326909 -

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-09-29
Diamond blastp: OGS1.0 vs UniRef90	2022-09-16
OGS1.0 of Tribonema minus UTEX_B_3156	2021-06-17

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
jgi.p\|Trimin1\|54894	mRNA_408	Tribonema minus UTEX_B_3156	mRNA	Contig_3 1325941..1326972 -

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>Trimin1|54894|CE54893_112 ID=Trimin1|54894|CE54893_112|Name=jgi.p|Trimin1|54894|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=301bp
MPACVAPSSSRELQTCGGVSEALAGVRRRDRQRLGVLGEQAESAAHHGTN
HKLLAAVNGNILSGLQPAVSRDLAHQGGDALLSYIAFLSSVSAWRPVTPS
AYLYDIGVHVDSHNLQFRAHHGDLGLHENFEMESAWSWVALRRVCLWGES
LAALFGIPASGWGTVACGCFVGGDMGGPVNHRPAHQGGDALLSYIAFLSS
VSAWRPVTPSAYLYDIGVHVDSHNLQFRAHYGDLGLHENFEMESAWSWVA
LRRVCLWVESLVALFGIPASMWGTVACGCFVGGDVGGGVWRASFACYIQE
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