Trimin1|4528|CE4527_76 (polypeptide) Tribonema minus UTEX_B_3156

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	jgi.p\|Trimin1\|4528
Unique Name	Trimin1\|4528\|CE4527_76
Type	polypeptide
Organism	Tribonema minus UTEX_B_3156 (Tribonema minus UTEX_B_3156 )
Sequence length	224

Homology

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BLAST of jgi.p|Trimin1|4528 vs. uniprot
Match: A0A835ZHS5_9STRA (PRA1 family protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZHS5_9STRA)

HSP 1 Score: 406 bits (1044), Expect = 9.370e-143
Identity = 223/223 (100.00%), Postives = 223/223 (100.00%), Query Frame = 0

Query:    1 MIELPSAPVRAASDGIYSPTSAAPVTFASASETAGGAESTAMETGKVYGLKALAFINSKAQLAPFRMPAELFGLGAVKPFSIPSASDLAVRLKLNLPYYSTNYAALYLALCAMSIITSPTALICLTVTAGGWILLLKTASNPEAEGVSIGSLTVKKQVAFVVMGIVSVFAGLTLLGTLLGWSLWLSAFVATAHAAARDATALADAAEANANRLEGDIEPFLNA 223
            MIELPSAPVRAASDGIYSPTSAAPVTFASASETAGGAESTAMETGKVYGLKALAFINSKAQLAPFRMPAELFGLGAVKPFSIPSASDLAVRLKLNLPYYSTNYAALYLALCAMSIITSPTALICLTVTAGGWILLLKTASNPEAEGVSIGSLTVKKQVAFVVMGIVSVFAGLTLLGTLLGWSLWLSAFVATAHAAARDATALADAAEANANRLEGDIEPFLNA
Sbjct:    1 MIELPSAPVRAASDGIYSPTSAAPVTFASASETAGGAESTAMETGKVYGLKALAFINSKAQLAPFRMPAELFGLGAVKPFSIPSASDLAVRLKLNLPYYSTNYAALYLALCAMSIITSPTALICLTVTAGGWILLLKTASNPEAEGVSIGSLTVKKQVAFVVMGIVSVFAGLTLLGTLLGWSLWLSAFVATAHAAARDATALADAAEANANRLEGDIEPFLNA 223

The following BLAST results are available for this feature:

BLAST of jgi.p|Trimin1|4528 vs. uniprot

BLAST of jgi.p|Trimin1|4528 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1


Match Name	E-value	Identity	Description
A0A835ZHS5_9STRA	9.370e-143	100.00	PRA1 family protein n=1 Tax=Tribonema minus TaxID=...	[more]

InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 196..216
None	No IPR available	PANTHER	PTHR19317:SF0	PRENYLATED RAB ACCEPTOR PROTEIN 1	coord: 58..203
IPR004895	Prenylated rab acceptor PRA1	PFAM	PF03208	PRA1	coord: 61..202 e-value: 2.4E-23 score: 82.4
IPR004895	Prenylated rab acceptor PRA1	PANTHER	PTHR19317	PRENYLATED RAB ACCEPTOR 1-RELATED	coord: 58..203

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
Contig_103	contig	Contig_103:404583..407524 +

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-09-29
Diamond blastp: OGS1.0 vs UniRef90	2022-09-16
OGS1.0 of Tribonema minus UTEX_B_3156	2021-06-17

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
jgi.p\|Trimin1\|4528	mRNA_15124	Tribonema minus UTEX_B_3156	mRNA	Contig_103 404514..407667 +

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>Trimin1|4528|CE4527_76 ID=Trimin1|4528|CE4527_76|Name=jgi.p|Trimin1|4528|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=224bp
MIELPSAPVRAASDGIYSPTSAAPVTFASASETAGGAESTAMETGKVYGL
KALAFINSKAQLAPFRMPAELFGLGAVKPFSIPSASDLAVRLKLNLPYYS
TNYAALYLALCAMSIITSPTALICLTVTAGGWILLLKTASNPEAEGVSIG
SLTVKKQVAFVVMGIVSVFAGLTLLGTLLGWSLWLSAFVATAHAAARDAT
ALADAAEANANRLEGDIEPFLNA*

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR004895	Prenylated_rab_accept_PRA1