Trimin1|40132|CE40131_838 (polypeptide) Tribonema minus UTEX_B_3156

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
Namejgi.p|Trimin1|40132
Unique NameTrimin1|40132|CE40131_838
Typepolypeptide
OrganismTribonema minus UTEX_B_3156 (Tribonema minus UTEX_B_3156 )
Sequence length91
Homology
BLAST of jgi.p|Trimin1|40132 vs. uniprot
Match: A0A835Z2Z9_9STRA (L51_S25_CI-B8 domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z2Z9_9STRA)

HSP 1 Score: 186 bits (471), Expect = 1.060e-59
Identity = 90/90 (100.00%), Postives = 90/90 (100.00%), Query Frame = 0
Query:    1 MSWRAGIGRQLREVMVCLAVQGDGASAGVRNWCLRRTAEIKMLNPNFPFFLREGDSIDPFMVVEFDWGKQQVVDLSNLTEKQVDDALKQA 90
            MSWRAGIGRQLREVMVCLAVQGDGASAGVRNWCLRRTAEIKMLNPNFPFFLREGDSIDPFMVVEFDWGKQQVVDLSNLTEKQVDDALKQA
Sbjct:    1 MSWRAGIGRQLREVMVCLAVQGDGASAGVRNWCLRRTAEIKMLNPNFPFFLREGDSIDPFMVVEFDWGKQQVVDLSNLTEKQVDDALKQA 90          
BLAST of jgi.p|Trimin1|40132 vs. uniprot
Match: Q1ZXN5_DICDI (L51_S25_CI-B8 domain-containing protein n=1 Tax=Dictyostelium discoideum TaxID=44689 RepID=Q1ZXN5_DICDI)

HSP 1 Score: 75.9 bits (185), Expect = 9.700e-16
Identity = 32/89 (35.96%), Postives = 59/89 (66.29%), Query Frame = 0
Query:    1 MSWRAGIGRQLREVMVCLAVQGDGASAGVRNWCLRRTAEIKMLNPNFPFFLREGDSIDPFMVVEFDWGKQQVVDLSNLTEKQVDDALKQ 89
            MSWRA +   L+E+ +    Q + +S G+RN+ ++  +++K LNP  P  +REG  ++P +   +DWGK++   ++NLTE++V++ LK+
Sbjct:    1 MSWRALLSHNLQEIRITFC-QSNQSSEGLRNFVVKNYSDLKRLNPKLPLLIREGHGVEPVIYARYDWGKEEKKVVTNLTEQEVEEKLKE 88          
BLAST of jgi.p|Trimin1|40132 vs. uniprot
Match: A0A151Z8C2_9MYCE (L51_S25_CI-B8 domain-containing protein n=1 Tax=Tieghemostelium lacteum TaxID=361077 RepID=A0A151Z8C2_9MYCE)

HSP 1 Score: 75.1 bits (183), Expect = 6.520e-15
Identity = 34/89 (38.20%), Postives = 58/89 (65.17%), Query Frame = 0
Query:    1 MSWRAGIGRQLREVMVCLAVQGDGASAGVRNWCLRRTAEIKMLNPNFPFFLREGDSIDPFMVVEFDWGKQQVVDLSNLTEKQVDDALKQ 89
            MSWRA +   L+E+ +    Q   +S G+RN+ ++  ++IK LNP  PF +RE   I+P +   +DWGK++   ++NLTE++V++ LK+
Sbjct:   54 MSWRALLSHNLQEIRIHFC-QSAQSSEGLRNFVVKNYSDIKKLNPKLPFLIREAHGIEPVIYARYDWGKEEKKVVTNLTEQEVEEKLKE 141          
BLAST of jgi.p|Trimin1|40132 vs. uniprot
Match: UPI00064481B6 (hypothetical protein n=1 Tax=Acytostelium subglobosum LB1 TaxID=1410327 RepID=UPI00064481B6)

HSP 1 Score: 73.2 bits (178), Expect = 1.110e-14
Identity = 33/89 (37.08%), Postives = 58/89 (65.17%), Query Frame = 0
Query:    1 MSWRAGIGRQLREVMVCLAVQGDGASAGVRNWCLRRTAEIKMLNPNFPFFLREGDSIDPFMVVEFDWGKQQVVDLSNLTEKQVDDALKQ 89
            MSWRA +   L+EV +C   Q + +S G+RN+  +  A++K LNP  P  +RE   I+P +   +DWG+++   ++N++E+QV++ LK+
Sbjct:    1 MSWRALLSHNLQEVRICFC-QTNQSSDGLRNFITKNYADLKRLNPRLPLMIRETHGIEPVIYARYDWGQEENRVVTNMSEQQVEEKLKE 88          
BLAST of jgi.p|Trimin1|40132 vs. uniprot
Match: A0A8J4PJJ9_9MYCE (L51_S25_CI-B8 domain-containing protein n=1 Tax=Polysphondylium violaceum TaxID=133409 RepID=A0A8J4PJJ9_9MYCE)

HSP 1 Score: 69.7 bits (169), Expect = 2.510e-13
Identity = 32/91 (35.16%), Postives = 57/91 (62.64%), Query Frame = 0
Query:    1 MSWRAGIGRQLREVMV--CLAVQGDGASAGVRNWCLRRTAEIKMLNPNFPFFLREGDSIDPFMVVEFDWGKQQVVDLSNLTEKQVDDALKQ 89
            MSWRA +   L+E+ +  C   Q   +S G+RN+ ++   ++K LNP  P  +RE   I+P +   +DWGK++   ++NL+E++V++ LK+
Sbjct:    1 MSWRALLSHNLQEIRIHFCTTTQ---SSEGLRNFVVKNYTDLKRLNPKLPLLIREAHGIEPVIYARYDWGKEEKKIVTNLSEQEVEEKLKE 88          
BLAST of jgi.p|Trimin1|40132 vs. uniprot
Match: F4PQ87_CAVFA (Putative NADH dehydrogenase n=1 Tax=Cavenderia fasciculata (strain SH3) TaxID=1054147 RepID=F4PQ87_CAVFA)

HSP 1 Score: 68.2 bits (165), Expect = 1.010e-12
Identity = 30/89 (33.71%), Postives = 55/89 (61.80%), Query Frame = 0
Query:    1 MSWRAGIGRQLREVMVCLAVQGDGASAGVRNWCLRRTAEIKMLNPNFPFFLREGDSIDPFMVVEFDWGKQQVVDLSNLTEKQVDDALKQ 89
            MSWRA +   L+E+ +    Q   +S G+RN+  +   ++K LNP  P  +RE   I+P +   +DWG+++   ++NL+E++V++ LK+
Sbjct:    1 MSWRALLSHNLQEIRIHFCQQAQ-SSEGLRNFITKNYTDLKRLNPKLPLMVREAHGIEPVIYARYDWGQEEKKVVTNLSEQEVEEKLKE 88          
BLAST of jgi.p|Trimin1|40132 vs. uniprot
Match: A0A6B2LRF9_9EUKA (L51_S25_CI-B8 domain-containing protein n=1 Tax=Arcella intermedia TaxID=1963864 RepID=A0A6B2LRF9_9EUKA)

HSP 1 Score: 58.2 bits (139), Expect = 8.770e-9
Identity = 29/89 (32.58%), Postives = 52/89 (58.43%), Query Frame = 0
Query:    1 MSWRAGIGRQLREVMVCLAVQGDGASAGVRNWCLRRTAEIKMLNPNFPFFLREGDSIDPFMVVEFDWGKQQVVDLSNLTEKQVDDALKQ 89
            MSW A     +RE+ + L      +S+G R +       IK LNP  PF++R   +++P +V  +D+G + + DL++L++KQV + +K+
Sbjct:    1 MSWIARASTNMREMRLILC-HASASSSGARKFLDTHYPTIKRLNPQLPFYVRHYPNVEPRLVARYDYGGEAMRDLTDLSDKQVYEKMKE 88          
BLAST of jgi.p|Trimin1|40132 vs. uniprot
Match: A0A3M6UPT7_POCDA (NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 2 n=3 Tax=Scleractinia TaxID=6125 RepID=A0A3M6UPT7_POCDA)

HSP 1 Score: 53.9 bits (128), Expect = 2.000e-7
Identity = 29/87 (33.33%), Postives = 48/87 (55.17%), Query Frame = 0
Query:    2 SWRAGIGRQLREVMVCLAVQGDGASAGVRNWCLRRTAEIKMLNPNFPFFLREGDSIDPFMVVEFDWGKQQVVDLSNLTEKQVDDALK 88
            +WR+ +G+ +RE+ + L  Q   +S GVR++  +    IK  NP  P  +RE   I P M   +D GK+  V L+N++   V  A++
Sbjct:    4 AWRSNLGKHVREIRIHLC-QKSHSSQGVRDFLEKYYIGIKKENPKVPILVRECSGIQPKMYARYDHGKENSVQLNNMSGDSVLQAME 89          
BLAST of jgi.p|Trimin1|40132 vs. uniprot
Match: A0A6A6V8C0_9PLEO (NADH-ubiquinone oxidoreductase-like protein 105 kDa subunit n=1 Tax=Sporormia fimetaria CBS 119925 TaxID=1340428 RepID=A0A6A6V8C0_9PLEO)

HSP 1 Score: 51.6 bits (122), Expect = 1.490e-6
Identity = 29/84 (34.52%), Postives = 46/84 (54.76%), Query Frame = 0
Query:    1 MSWRAGIGRQLREVMVCLAVQGDGASAGVRNWCLRRTAEIKMLNPNFPFFLREGDSIDPFMVVEFDWGKQQVVDLSNLTEKQVD 84
            M+ +    + L+EV       GD ASA VRN+  R    +K  NP+ P  LRE    +P +   FD+GK+++V L  L +K+++
Sbjct:    1 MASKYAFAQGLKEVRFLFCQTGD-ASAPVRNFLTRSYPTMKKHNPHTPIMLREAAGTEPKVYARFDFGKEKMVPLKGLGDKEIE 83          
The following BLAST results are available for this feature:
BLAST of jgi.p|Trimin1|40132 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 9
Match NameE-valueIdentityDescription
A0A835Z2Z9_9STRA1.060e-59100.00L51_S25_CI-B8 domain-containing protein n=1 Tax=Tr... [more]
Q1ZXN5_DICDI9.700e-1635.96L51_S25_CI-B8 domain-containing protein n=1 Tax=Di... [more]
A0A151Z8C2_9MYCE6.520e-1538.20L51_S25_CI-B8 domain-containing protein n=1 Tax=Ti... [more]
UPI00064481B61.110e-1437.08hypothetical protein n=1 Tax=Acytostelium subglobo... [more]
A0A8J4PJJ9_9MYCE2.510e-1335.16L51_S25_CI-B8 domain-containing protein n=1 Tax=Po... [more]
F4PQ87_CAVFA1.010e-1233.71Putative NADH dehydrogenase n=1 Tax=Cavenderia fas... [more]
A0A6B2LRF9_9EUKA8.770e-932.58L51_S25_CI-B8 domain-containing protein n=1 Tax=Ar... [more]
A0A3M6UPT7_POCDA2.000e-733.33NADH dehydrogenase [ubiquinone] 1 alpha subcomplex... [more]
A0A6A6V8C0_9PLEO1.490e-634.52NADH-ubiquinone oxidoreductase-like protein 105 kD... [more]
back to top
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR007741Ribosomal protein/NADH dehydrogenase domainSMARTSM00916L51_S25_CI_B8_2coord: 21..90
e-value: 0.0042
score: 26.3
NoneNo IPR availableGENE3D3.40.30.10Glutaredoxincoord: 2..90
e-value: 6.2E-17
score: 63.7
NoneNo IPR availablePANTHERPTHR12878:SF0NADH DEHYDROGENASE [UBIQUINONE] 1 ALPHA SUBCOMPLEX SUBUNIT 2coord: 1..89
IPR016464NADH dehydrogenase [ubiquinone] (complex I), alpha subcomplex, subunit 2PANTHERPTHR12878NADH-UBIQUINONE OXIDOREDUCTASE B8 SUBUNITcoord: 1..89
IPR036249Thioredoxin-like superfamilySUPERFAMILY52833Thioredoxin-likecoord: 12..89

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Contig_203contigContig_203:36365..37775 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Tribonema minus UTEX_B_31562021-06-17
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
jgi.p|Trimin1|40132mRNA_15750Tribonema minus UTEX_B_3156 mRNAContig_203 36279..38770 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Trimin1|40132|CE40131_838 ID=Trimin1|40132|CE40131_838|Name=jgi.p|Trimin1|40132|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=91bp
MSWRAGIGRQLREVMVCLAVQGDGASAGVRNWCLRRTAEIKMLNPNFPFF
LREGDSIDPFMVVEFDWGKQQVVDLSNLTEKQVDDALKQA*
back to top
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR007741Ribosome/NADH_DH
IPR016464NADH_Ub_cplx-1_asu_su-2
IPR036249Thioredoxin-like_sf