Trimin1|36698|CE36697_1051 (polypeptide) Tribonema minus UTEX_B_3156

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
Namejgi.p|Trimin1|36698
Unique NameTrimin1|36698|CE36697_1051
Typepolypeptide
OrganismTribonema minus UTEX_B_3156 (Tribonema minus UTEX_B_3156 )
Sequence length227
Homology
BLAST of jgi.p|Trimin1|36698 vs. uniprot
Match: A0A835Z4H5_9STRA (Chloroplast 50S ribosomal protein L15 n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z4H5_9STRA)

HSP 1 Score: 440 bits (1131), Expect = 6.440e-156
Identity = 226/226 (100.00%), Postives = 226/226 (100.00%), Query Frame = 0
Query:    1 MRSFLYLAACLVIAAVSDAFTASAFHGQALCAATGKASSSISMKIFDWKRRESDSFNLAVTELSPATLTPSPGSRHRKARKGRGISAGQGASCGFGMRGQRSRSGPGVRAGFEGGQQPLYRRLPKFVGRPMGPGHTKKEFHLITLEALNSAAEGATVSFETLHEQGTLTKTSLRWHKVVGNGELNVRGLTVQAHAFTGSAKEAIENAGGKCQLLSPTTNEIVDMSA 226
            MRSFLYLAACLVIAAVSDAFTASAFHGQALCAATGKASSSISMKIFDWKRRESDSFNLAVTELSPATLTPSPGSRHRKARKGRGISAGQGASCGFGMRGQRSRSGPGVRAGFEGGQQPLYRRLPKFVGRPMGPGHTKKEFHLITLEALNSAAEGATVSFETLHEQGTLTKTSLRWHKVVGNGELNVRGLTVQAHAFTGSAKEAIENAGGKCQLLSPTTNEIVDMSA
Sbjct:    1 MRSFLYLAACLVIAAVSDAFTASAFHGQALCAATGKASSSISMKIFDWKRRESDSFNLAVTELSPATLTPSPGSRHRKARKGRGISAGQGASCGFGMRGQRSRSGPGVRAGFEGGQQPLYRRLPKFVGRPMGPGHTKKEFHLITLEALNSAAEGATVSFETLHEQGTLTKTSLRWHKVVGNGELNVRGLTVQAHAFTGSAKEAIENAGGKCQLLSPTTNEIVDMSA 226          
BLAST of jgi.p|Trimin1|36698 vs. uniprot
Match: A0A836CHQ3_9STRA (Chloroplast 50S ribosomal protein L15 n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CHQ3_9STRA)

HSP 1 Score: 368 bits (945), Expect = 1.490e-127
Identity = 191/221 (86.43%), Postives = 206/221 (93.21%), Query Frame = 0
Query:    7 LAACL-VIAAVSDAFTA-SAFHGQALCAATGKASSSISMKIFDWKRRESDSFNLAVTELSPATLTPSPGSRHRKARKGRGISAGQGASCGFGMRGQRSRSGPGVRAGFEGGQQPLYRRLPKFVGRPMGPGHTKKEFHLITLEALNSAAEGATVSFETLHEQGTLTKTSLRWHKVVGNGELNVRGLTVQAHAFTGSAKEAIENAGGKCQLLSPTTNEIVDMS 225
            +AACL ++ AV+DA+ A SAF+GQA+   T KAS+++SMKIFDWKRR+ DS N AV ELSPATL PSPGSRHRKARKGRGISAGQGASCGFGMRGQRSRSGPGVRAGFEGGQQPLYRRLPKFVGRPMGPGHTKKEFHLITLEALNSAAEG+TVSFETLHEQGTLTKTSL+WHKVVGNGELNV+ LTVQAHAFTGSAKEAIE AGGKCQLLSPTTNEIVDM+
Sbjct:    6 VAACLALVVAVADAWVATSAFNGQAVGTHTCKASNAVSMKIFDWKRRDDDSANTAVKELSPATLVPSPGSRHRKARKGRGISAGQGASCGFGMRGQRSRSGPGVRAGFEGGQQPLYRRLPKFVGRPMGPGHTKKEFHLITLEALNSAAEGSTVSFETLHEQGTLTKTSLKWHKVVGNGELNVKNLTVQAHAFTGSAKEAIEGAGGKCQLLSPTTNEIVDMT 226          
BLAST of jgi.p|Trimin1|36698 vs. uniprot
Match: D7FKW4_ECTSI (Chloroplast 50S ribosomal protein L15 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FKW4_ECTSI)

HSP 1 Score: 271 bits (694), Expect = 2.860e-89
Identity = 144/227 (63.44%), Postives = 169/227 (74.45%), Query Frame = 0
Query:    1 MRSFLYLAACLVIAAVSDAFTASAFHGQALCAATG---KASSSISMKIFDWKRRESDSFNLAVTELSPATLTPSPGSRHRKARKGRGISAGQGASCGFGMRGQRSRSGPGVRAGFEGGQQPLYRRLPKFVGRPMGPGHTKKEFHLITLEALNSAAEGATVSFETLHEQGTLTKTSLRWHKVVGNGELNVRGLTVQAHAFTGSAKEAIENAGGKCQLLSPTTNEIVDM 224
            M++ L   A   +   +  F  +AF GQ L A T    + ++ ++MKIFDWKRRES+   L +  ++  TL P+PGSR R  RKGRGI+AGQGASCGFGMRGQ+SRSGPGVRAGFEGGQQPLYRRLPK VGRPMGPGHTKK+F+LI L+ALN   EGATV+FE+L   G +TKT  RWHKVVG  EL   GLTVQAH FT SA EAIE  GGKCQLLSPTTNE++ M
Sbjct:    1 MKATLATTALFCVGVANAFFAPTAFTGQQLTAGTSAPSRTTTGVTMKIFDWKRRESED-GLVLDRVAVDTLKPAPGSRQRHKRKGRGIAAGQGASCGFGMRGQKSRSGPGVRAGFEGGQQPLYRRLPKLVGRPMGPGHTKKQFNLIKLDALNGLDEGATVNFESLRAAGKVTKTKHRWHKVVGGMELETTGLTVQAHGFTKSAVEAIEAKGGKCQLLSPTTNEVLSM 226          
BLAST of jgi.p|Trimin1|36698 vs. uniprot
Match: A0A7S1BKP2_9STRA (Hypothetical protein n=2 Tax=Corethron hystrix TaxID=216773 RepID=A0A7S1BKP2_9STRA)

HSP 1 Score: 243 bits (619), Expect = 5.740e-78
Identity = 131/220 (59.55%), Postives = 166/220 (75.45%), Query Frame = 0
Query:   11 LVIAAV---SDAFTASAFHGQALCAATGKASSSISMKIFDWKRRESDSFNLAVTELSPATLT---PSPGSRHRKARKGRGISAGQGASCGFGMRGQRSRSGPGVRAGFEGGQQPLYRRLPKFVGRPMGPGHTKKEFHLITLEALNSAAEGATVSFETLHEQGTLTKTSLRWHKVV-GNGELNVRGLTVQAHAFTGSAKEAIENAGGKCQLLSPTTNEIVD 223
            +++AAV   +DAF  S+FHG ++      ++SS++MK+FDWKRRE+D   +   E    TL    P+PGSRHRK RKGRGI+AGQGA+CGFGMRGQ+SRSG   RAGFEGGQQPLYRRLPKFVG+PMGPGH+K  ++LI L+ LN AAEG+TV+F +L E G +TK+ +  HKVV G  E   +GL VQAHAFT SA+ AIE AGGKC+LLSPTT  +++
Sbjct:    6 VILAAVVVSTDAF--SSFHGSSVSQHVSTSTSSLTMKVFDWKRREADESAINDAENFVFTLDNLKPAPGSRHRKKRKGRGIAAGQGATCGFGMRGQKSRSGRPTRAGFEGGQQPLYRRLPKFVGKPMGPGHSKTVYNLIKLDELNGAAEGSTVNFASLFESGDITKSKVGIHKVVTGKKEFTAKGLIVQAHAFTSSAQTAIEGAGGKCELLSPTTGAVLE 223          
BLAST of jgi.p|Trimin1|36698 vs. uniprot
Match: A0A7S1BF06_9STRA (Hypothetical protein n=1 Tax=Corethron hystrix TaxID=216773 RepID=A0A7S1BF06_9STRA)

HSP 1 Score: 234 bits (597), Expect = 1.250e-74
Identity = 130/220 (59.09%), Postives = 160/220 (72.73%), Query Frame = 0
Query:    9 ACLVIAAVSDAFTA-SAFHGQALCAATGKASSSISMKIFDWKRRESDSFNLAVTELSPATLT---PSPGSRHRKARKGRGISAGQGASCGFGMRGQRSRSGPGVRAGFEGGQQPLYRRLPKFVGRPMGPGHTKKEFHLITLEALNSAAEGATVSFETLHEQGTLTKTSLRWHKVV-GNGELNVRGLTVQAHAFTGSAKEAIENAGGKCQLLSPTTNEIVD 223
            A L+ AAV+    A S+FHG ++      A+   +MK+FDWKRRE+D   +   E    TL    P+PGSRHRK RKGRGI+AGQGA+CGFGMRGQ+SRSG   RAGFEGGQQPLYRRLPKFVG+PMGPGH+K  ++LI  + +N AAEG+TVSF +L E G +TK     HKVV G  E + +G+TVQAHAFT SA+ AIE AGGKC+LLSPTT  ++D
Sbjct:    5 AVLLAAAVAVPVDALSSFHGSSVAHRVSTATGP-TMKVFDWKRREADESAINDAETFVFTLDNLKPAPGSRHRKKRKGRGIAAGQGATCGFGMRGQKSRSGRPTRAGFEGGQQPLYRRLPKFVGKPMGPGHSKTVYNLIKTDEINGAAEGSTVSFGSLFEAGDVTKAKYGIHKVVTGKKEFSAKGVTVQAHAFTNSARAAIEGAGGKCELLSPTTGAVLD 223          
BLAST of jgi.p|Trimin1|36698 vs. uniprot
Match: A0A448ZNF8_9STRA (Ribosomal_L18e/L15P domain-containing protein n=1 Tax=Pseudo-nitzschia multistriata TaxID=183589 RepID=A0A448ZNF8_9STRA)

HSP 1 Score: 233 bits (593), Expect = 4.590e-74
Identity = 124/220 (56.36%), Postives = 160/220 (72.73%), Query Frame = 0
Query:    7 LAACLVIAAVSDAFTASAFHGQALCAATGKASSSISMKIFDWKRR---ESDSFNLAVTELSPATLTPSPGSRHRKARKGRGISAGQGASCGFGMRGQRSRSGPGVRAGFEGGQQPLYRRLPKFVGRPMGPGHTKKEFHLITLEALNSAAEGATVSFETLHEQGTLTKTSLRWHKVV-GNGELNVRGLTVQAHAFTGSAKEAIENAGGKCQLLSPTTNEIV 222
            +A  +++A V+     S+F G  L A +  +++++SMK+ DWKRR   ESD  ++   E +  +L P+PGSR +K RKGRGISAGQGA+CGFGMRGQ+SRSG   R GFEGGQQPLYRRLPKF GRPMGPGHTKKE++LI L+ALN  A G+T +FE+L E   +TK+    HKVV G  E   + +TVQAHAFT SA+ AIE AGGKC+LL P+T E++
Sbjct:    3 VAGLILLAGVASTDAFSSFTGTRLAAVSTSSANTLSMKLHDWKRRTADESDINDVENYEFTLDSLRPAPGSRKKKTRKGRGISAGQGATCGFGMRGQKSRSGRPTRPGFEGGQQPLYRRLPKFTGRPMGPGHTKKEYNLIQLDALNGVAPGSTCNFESLFESKAVTKSKHSTHKVVVGREEFTAKDITVQAHAFTKSARAAIEGAGGKCELLKPSTGEVI 222          
BLAST of jgi.p|Trimin1|36698 vs. uniprot
Match: A0A6U3RP18_9STRA (Hypothetical protein n=2 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A6U3RP18_9STRA)

HSP 1 Score: 226 bits (576), Expect = 1.980e-71
Identity = 128/225 (56.89%), Postives = 159/225 (70.67%), Query Frame = 0
Query:    5 LYLAACLV--IAAVSDAFTASAFHGQALCAATGKASSSISMKIFDWKRRESDSFNLAV---TELSPATLTPSPGSRHRKARKGRGISAGQGASCGFGMRGQRSRSGPGVRAGFEGGQQPLYRRLPKFVGRPMGPGHTKKEFHLITLEALNSAAEGATVSFETLHEQGTLTKTSLRWHKVV-GNGELNVRGLTVQAHAFTGSAKEAIENAGGKCQLLSPTTNEIVD 223
            L LAA +V   AA S +FT SA     +C+     +S++SMKIFDWKRRE+D   L     TE +   L P+PGSR RK RKGRGISAGQGA+CGFGMRGQ++R+G   R GFEGGQQPLYRRLPKFVGRP GPGHTK E+++I L+ LN AA G TV+F+TL E G +TK+ L  HKVV G  +   + +TVQAH FT +A+ AIE  GG CQ+L  TT E+++
Sbjct:    8 LLLAAVMVSTAAAFSSSFTPSAQRVSTVCS-----TSNLSMKIFDWKRREADESALNDVDNTEFTFDNLRPAPGSRKRKNRKGRGISAGQGATCGFGMRGQKARAGRPTRPGFEGGQQPLYRRLPKFVGRPTGPGHTKTEYNIIKLDELNGAAAGETVNFDTLFEAGAITKSKLDIHKVVVGREDFTAKDITVQAHGFTKAARAAIEANGGTCQILKRTTGEVIE 227          
BLAST of jgi.p|Trimin1|36698 vs. uniprot
Match: K0SHX0_THAOC (Ribosomal_L18e/L15P domain-containing protein n=1 Tax=Thalassiosira oceanica TaxID=159749 RepID=K0SHX0_THAOC)

HSP 1 Score: 225 bits (574), Expect = 3.270e-71
Identity = 120/194 (61.86%), Postives = 144/194 (74.23%), Query Frame = 0
Query:   32 AATGKASSSISMKIFDWKRRESD--SFNLAVTELSPATLTPSPGSRHRKARKGRGISAGQGASCGFGMRGQRSRSGPGVRAGFEGGQQPLYRRLPKFVGRPMGPGHTKKEFHLITLEALNSAAEGATVSFETLHEQGTLTKTSLRWHKVV-GNGELNVRGLTVQAHAFTGSAKEAIENAGGKCQLLSPTTNEIV 222
            A T  + S +SMK++DWKRR +D  + N   TE +  ++ P+PGSR RK RKGRGISAGQGA+CGFGMRGQ++RSG   R GFEGGQQPLYRRLPKF GRP GPGH K E++LI L+ +N   EG+TVSFE+L E G  TK  L  HKVV G  E   +G+TVQAHAFT SA+EAIE AGGK  LLS TTNE++
Sbjct:   28 AVTSSSPSQLSMKLYDWKRRTADESAVNDLETEWTLGSIKPAPGSRKRKQRKGRGISAGQGATCGFGMRGQKARSGRPTRPGFEGGQQPLYRRLPKFTGRPTGPGHQKTEYNLIKLDDINGCEEGSTVSFESLIETGATTKAKLDIHKVVVGREEFTAKGVTVQAHAFTKSAQEAIEGAGGKAVLLSKTTNEVL 221          
BLAST of jgi.p|Trimin1|36698 vs. uniprot
Match: A0A5J4Z048_PORPP (50S ribosomal protein L15 n=1 Tax=Porphyridium purpureum TaxID=35688 RepID=A0A5J4Z048_PORPP)

HSP 1 Score: 225 bits (574), Expect = 3.720e-71
Identity = 112/185 (60.54%), Postives = 141/185 (76.22%), Query Frame = 0
Query:   42 SMKIFDWKRRESDSFN--LAVTELSPATLTPSPGSRHRKARKGRGISAGQGASCGFGMRGQRSRSGPGVRAGFEGGQQPLYRRLPKFVGRPMGPGHTKKEFHLITLEALNSAAEGATVSFETLHEQGTLTKTSLRWHKVVGNGELNVRGLTVQAHAFTGSAKEAIENAGGKCQLLSPTTNEIVDM 224
            SMK+FDWK+R +++++    + E+S  T+ P+PGSR RK RKGRG++AGQG SCGFGMRGQ+SRSG   R GFEGGQ PLYRRLPK+VGRPMGPGHTK  ++L+ L+ LN  AEG  V+F+ L E G +TK   +  K++G  EL V+ LTV+AHAFT SA EAIE AGGKC LLSPTT E ++M
Sbjct:   38 SMKVFDWKKRGAEAYSGRAEMGEMSVTTVIPAPGSRKRKTRKGRGVAAGQGRSCGFGMRGQKSRSGNPTRPGFEGGQTPLYRRLPKYVGRPMGPGHTKTMYNLVKLDILNKCAEGEVVTFDALVESGKMTKGKFKLAKIMGGAELTVKNLTVKAHAFTSSAVEAIEAAGGKCVLLSPTTGEDINM 222          
BLAST of jgi.p|Trimin1|36698 vs. uniprot
Match: A0A7S1H2P5_9STRA (Hypothetical protein n=1 Tax=Thalassionema nitzschioides TaxID=33649 RepID=A0A7S1H2P5_9STRA)

HSP 1 Score: 223 bits (567), Expect = 4.430e-70
Identity = 118/196 (60.20%), Postives = 147/196 (75.00%), Query Frame = 0
Query:   32 AATGKASSSISMKIFDWKRRESDSFNLAVTE---LSPATLTPSPGSRHRKARKGRGISAGQGASCGFGMRGQRSRSGPGVRAGFEGGQQPLYRRLPKFVGRPMGPGHTKKEFHLITLEALNSAAEGATVSFETLHEQGTLTKTSLRWHKVV-GNGELNVRGLTVQAHAFTGSAKEAIENAGGKCQLLSPTTNEIVD 223
            A+  K+SS++SMKIFDWKRRE+D   L   +    +  T+ P+PGSR RK RKGRGI+AGQGA+CGFGMRGQ+SRSG   R GFEGGQ PLYRRLPKFVG+P+GPGHTK  ++LI L  +NSA  G+T +FE+L E G  TK+    HKVV GN E   + +TVQAHAFT +A+ AIENAGGKC+LL  TT E+++
Sbjct:   31 ASVPKSSSNLSMKIFDWKRREADESALNDPDGPVWTVNTVKPAPGSRKRKKRKGRGIAAGQGATCGFGMRGQKSRSGRPERPGFEGGQTPLYRRLPKFVGKPLGPGHTKTVYNLIKLNQINSAEPGSTCNFESLLESGIATKSRYPIHKVVVGNDEFTAKDVTVQAHAFTAAARAAIENAGGKCELLKRTTGEVIE 226          
The following BLAST results are available for this feature:
BLAST of jgi.p|Trimin1|36698 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A835Z4H5_9STRA6.440e-156100.00Chloroplast 50S ribosomal protein L15 n=1 Tax=Trib... [more]
A0A836CHQ3_9STRA1.490e-12786.43Chloroplast 50S ribosomal protein L15 n=1 Tax=Trib... [more]
D7FKW4_ECTSI2.860e-8963.44Chloroplast 50S ribosomal protein L15 n=1 Tax=Ecto... [more]
A0A7S1BKP2_9STRA5.740e-7859.55Hypothetical protein n=2 Tax=Corethron hystrix Tax... [more]
A0A7S1BF06_9STRA1.250e-7459.09Hypothetical protein n=1 Tax=Corethron hystrix Tax... [more]
A0A448ZNF8_9STRA4.590e-7456.36Ribosomal_L18e/L15P domain-containing protein n=1 ... [more]
A0A6U3RP18_9STRA1.980e-7156.89Hypothetical protein n=2 Tax=Ditylum brightwellii ... [more]
K0SHX0_THAOC3.270e-7161.86Ribosomal_L18e/L15P domain-containing protein n=1 ... [more]
A0A5J4Z048_PORPP3.720e-7160.5450S ribosomal protein L15 n=1 Tax=Porphyridium pur... [more]
A0A7S1H2P5_9STRA4.430e-7060.20Hypothetical protein n=1 Tax=Thalassionema nitzsch... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR021131Ribosomal protein L18e/L15PPFAMPF00828Ribosomal_L27Acoord: 89..212
e-value: 1.7E-26
score: 93.2
IPR005749Ribosomal protein L15, bacterial-typeTIGRFAMTIGR01071TIGR01071coord: 67..211
e-value: 3.6E-36
score: 122.1
IPR005749Ribosomal protein L15, bacterial-typePANTHERPTHR1293450S RIBOSOMAL PROTEIN L15coord: 44..212
NoneNo IPR availableGENE3D3.100.10.10coord: 135..215
e-value: 2.4E-16
score: 61.5
NoneNo IPR availablePANTHERPTHR12934:SF1139S RIBOSOMAL PROTEIN L15, MITOCHONDRIALcoord: 44..212
IPR001196Ribosomal protein L15, conserved sitePROSITEPS00475RIBOSOMAL_L15coord: 177..208
IPR030878Ribosomal protein L15HAMAPMF_01341Ribosomal_L15coord: 65..214
score: 17.335814
IPR036227Ribosomal L18e/L15P superfamilySUPERFAMILY52080Ribosomal proteins L15p and L18ecoord: 68..213

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Contig_196contigContig_196:227806..231019 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Tribonema minus UTEX_B_31562021-06-17
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
jgi.p|Trimin1|36698mRNA_16267Tribonema minus UTEX_B_3156 mRNAContig_196 227680..231059 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Trimin1|36698|CE36697_1051 ID=Trimin1|36698|CE36697_1051|Name=jgi.p|Trimin1|36698|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=227bp
MRSFLYLAACLVIAAVSDAFTASAFHGQALCAATGKASSSISMKIFDWKR
RESDSFNLAVTELSPATLTPSPGSRHRKARKGRGISAGQGASCGFGMRGQ
RSRSGPGVRAGFEGGQQPLYRRLPKFVGRPMGPGHTKKEFHLITLEALNS
AAEGATVSFETLHEQGTLTKTSLRWHKVVGNGELNVRGLTVQAHAFTGSA
KEAIENAGGKCQLLSPTTNEIVDMSA*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR021131Ribosomal_L18e/L15P
IPR005749Ribosomal_L15_bac-type
IPR001196Ribosomal_L15_CS
IPR030878Ribosomal_L15
IPR036227L18e/L15P_sf