Trimin1|35968|CE35967_69 (polypeptide) Tribonema minus UTEX_B_3156

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
Namejgi.p|Trimin1|35968
Unique NameTrimin1|35968|CE35967_69
Typepolypeptide
OrganismTribonema minus UTEX_B_3156 (Tribonema minus UTEX_B_3156 )
Sequence length243
Homology
BLAST of jgi.p|Trimin1|35968 vs. uniprot
Match: A0A836CII2_9STRA (Sld5 domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CII2_9STRA)

HSP 1 Score: 422 bits (1086), Expect = 1.580e-148
Identity = 242/242 (100.00%), Postives = 242/242 (100.00%), Query Frame = 0
Query:    1 MASHGVPEPGSEASTLRHLSPDELEYLAGDEMVEVVPSESHKRLHFRGTYGPFVAGSRTAVPLWLAIMLKRRNKASIACPPWMTAESLERVLAAERREETFAELPFHYLEISSLLLSVAADDMGQQVDRMRVLLEDIENVRQGKMYKGMGDAAQRADGAIKVNRIGAMELLPVRTFFSAALSSMYDISGAKGRAEVARLQRVSAPDAMGGAAPKAXXXXXXXXXXXXXXXXXXXXSRLRRFR 242
            MASHGVPEPGSEASTLRHLSPDELEYLAGDEMVEVVPSESHKRLHFRGTYGPFVAGSRTAVPLWLAIMLKRRNKASIACPPWMTAESLERVLAAERREETFAELPFHYLEISSLLLSVAADDMGQQVDRMRVLLEDIENVRQGKMYKGMGDAAQRADGAIKVNRIGAMELLPVRTFFSAALSSMYDISGAKGRAEVARLQRVSAPDAMGGAAPKAXXXXXXXXXXXXXXXXXXXXSRLRRFR
Sbjct:    1 MASHGVPEPGSEASTLRHLSPDELEYLAGDEMVEVVPSESHKRLHFRGTYGPFVAGSRTAVPLWLAIMLKRRNKASIACPPWMTAESLERVLAAERREETFAELPFHYLEISSLLLSVAADDMGQQVDRMRVLLEDIENVRQGKMYKGMGDAAQRADGAIKVNRIGAMELLPVRTFFSAALSSMYDISGAKGRAEVARLQRVSAPDAMGGAAPKAXXXXXXXXXXXXXXXXXXXXSRLRRFR 242          
BLAST of jgi.p|Trimin1|35968 vs. uniprot
Match: D7G631_ECTSI (Sld5 domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G631_ECTSI)

HSP 1 Score: 190 bits (483), Expect = 9.090e-57
Identity = 99/185 (53.51%), Postives = 133/185 (71.89%), Query Frame = 0
Query:    9 PGSEASTLRHLSPDELEYLAGDEMVEVVPSESHKRLHF-RGTYGPFVAGSRTAVPLWLAIMLKRRNKASIACPPWMTAESLERVLAAERREET-FAELPFHYLEISSLLLSVAADDMGQQVDRMRVLLEDIENVRQGKMYKGMGDAAQRADGAIKVNRIGAMELLPVRTFFSAALSSMYDISGAK 191
            P +++  L  L+  ELE++A D ++E+VP   H  LH  +G +GPFV  +R  VPLWLAI LK+R K  IACP +M+   LE+VL  ER +   F  LP HYLEI+SLLL+ A+DD+ ++ DR+R LLED+ENVR+ KMY+GMG AAQ    A+KVN +GAMELLPVR+FF+ AL+S+Y +SG K
Sbjct:    2 PSADSGGLAQLTAAELEFIAEDALIEIVPKFKHGPLHLIQGDFGPFVPQARAKVPLWLAITLKKRQKCQIACPSFMSVGYLEQVLRREREDAAVFTPLPHHYLEIASLLLNTASDDI-EEPDRVRTLLEDVENVRRAKMYEGMGSAAQEVQQAVKVNDLGAMELLPVRSFFAEALASLYVVSGQK 185          
BLAST of jgi.p|Trimin1|35968 vs. uniprot
Match: A0A2D4C9F5_PYTIN (DNA replication complex GINS protein PSF2 n=1 Tax=Pythium insidiosum TaxID=114742 RepID=A0A2D4C9F5_PYTIN)

HSP 1 Score: 134 bits (336), Expect = 4.800e-35
Identity = 77/180 (42.78%), Postives = 111/180 (61.67%), Query Frame = 0
Query:   19 LSPDELEYLAGDEMVEVVPS----ESHKRLHF-RGTYGPFVAGSRTAVPLWLAIMLKRRNKASIACPPWMTAESLERVLAAERREETFAELPFHYLEISSLLLSVAADDMGQQVDRMRVLLEDIENVRQGKMYKGMGDAAQRADG-----AIKVNRIGAMELLPVRTFFSAALSSMYDIS 188
            LS  E+E+LA  E+++++P     E+   L+F  G +GPF  G  T VPLWLAIMLK+ NK  I  P W + + L + L  E+  + F ELPFHYLEI+SLL   AA+D+ +Q++ +R LLEDI+NVRQ K+  G+   A          AI++N IGA+E+  VR F   +L+  Y ++
Sbjct:    9 LSASEIEFLAEQELIDIIPHFGIRENDGVLNFISGDFGPFQPGITTRVPLWLAIMLKQLNKCRIIEPSWFSVDYLSQRLEREKDSDVFEELPFHYLEIASLLFKHAAEDI-EQIEHIRSLLEDIQNVRQDKIRNGLYKIANDVQSGGTAYAIQMNNIGALEVNSVRQFMIGSLNKFYRLA 187          
BLAST of jgi.p|Trimin1|35968 vs. uniprot
Match: A0A225V0D2_9STRA (DNA replication complex GINS protein PSF2 n=1 Tax=Phytophthora megakarya TaxID=4795 RepID=A0A225V0D2_9STRA)

HSP 1 Score: 132 bits (333), Expect = 1.180e-34
Identity = 77/180 (42.78%), Postives = 107/180 (59.44%), Query Frame = 0
Query:   19 LSPDELEYLAGDEMVEVVPS----ESHKRLHF-RGTYGPFVAGSRTAVPLWLAIMLKRRNKASIACPPWMTAESLERVLAAERREETFAELPFHYLEISSLLLSVAADDMGQQVDRMRVLLEDIENVRQGKMYKGMGDAAQRADG-----AIKVNRIGAMELLPVRTFFSAALSSMYDIS 188
            LS  E E+LA  E++ ++P     +++  L+   G +GPF  G  T VPLWLAIMLK+ NK  I  P W++ E L   L  E+  E F ELPFHYLEI+SLLL  A +D+ Q  + +R LLED++NVRQ K+  G+   A    G     AI++N I A+E+  VR F   +L+  Y +S
Sbjct:    4 LSASETEFLAEQELIAIMPHFHLRDNNAMLNLISGDFGPFQPGITTHVPLWLAIMLKQLNKCRILAPSWLSVEYLTSRLEREKASEAFEELPFHYLEIASLLLKNAPEDLDQG-EHLRSLLEDLQNVRQDKIRNGLAKIAGDVQGGGTALAIQMNNISALEISSVREFMLGSLNQFYQLS 182          
BLAST of jgi.p|Trimin1|35968 vs. uniprot
Match: A0A2Z7API4_9LAMI (DNA replication complex GINS protein PSF2 n=1 Tax=Dorcoceras hygrometricum TaxID=472368 RepID=A0A2Z7API4_9LAMI)

HSP 1 Score: 132 bits (331), Expect = 1.890e-34
Identity = 75/183 (40.98%), Postives = 111/183 (60.66%), Query Frame = 0
Query:   10 GSEASTLRHLSPDELEYLAGDEMVEVVPSESHKRLHF-RGTYGPFVAGSRTAVPLWLAIMLKRRNKASIACPPWMTAESLERVLAAERREETFAELPFHYLEISSLLLSVAADDMGQQVDRMRVLLEDIENVRQGKMYKGMGDAAQRADGAIKVNRIGAMELLPVRTFFSAALSSMYDISGAK 191
            G+  S     S  ELE+LA DEMVE+VP+   + L+F  G +GPF+    T VPLWLA+ L++R K +I  P WM+ E L +VL AER  E F  LPFHY+EIS LL   A +D+   +  +R L+EDI++VR  K+  G+   ++    A+++  + AME   VR F + AL + + +S ++
Sbjct:    3 GASGSNASAFSAAELEFLAEDEMVEIVPNFRMEPLNFISGDFGPFIPQMPTEVPLWLAVSLRKRGKCTIRTPEWMSVEKLTQVLEAERDSEKFQPLPFHYVEISRLLFDHAREDIPD-IYMVRSLIEDIKDVRFHKIGTGLEIISKERTYALRLKNLSAMEANIVRPFVTKALETFHKLSSSE 184          
BLAST of jgi.p|Trimin1|35968 vs. uniprot
Match: A0A6A3SX89_9STRA (DNA replication complex GINS protein PSF2 n=3 Tax=Phytophthora TaxID=4783 RepID=A0A6A3SX89_9STRA)

HSP 1 Score: 132 bits (331), Expect = 2.530e-34
Identity = 77/181 (42.54%), Postives = 109/181 (60.22%), Query Frame = 0
Query:   19 LSPDELEYLAGDEMVEVVPS----ESHKRLHF-RGTYGPFVAGSRTAVPLWLAIMLKRRNKASIACPPWMTAESLERVLAAERREETFAELPFHYLEISSLLLSVAADDMGQQVDRMRVLLEDIENVRQGKMYKGM----GDAAQRADGA--IKVNRIGAMELLPVRTFFSAALSSMYDIS 188
            LS  E E+LA  E++ ++P     +++  L+F  G +GPF  G  T VPLWLAIMLK+ NK  I  P W++ + L   L  E+  + F ELPFHYLE++SLLL  A +D+ Q  + MR LLED++NVRQ K+  G+    GD  Q    A  I++N I A+E+  VR F   +L+  Y +S
Sbjct:    4 LSASETEFLAEQELIAILPHFHLRDNNGMLNFISGDFGPFQPGITTHVPLWLAIMLKQLNKCRILAPSWLSVDYLTTRLEREKTSDAFEELPFHYLEVASLLLKNAPEDLNQG-EHMRSLLEDLQNVRQDKIRNGLSRIAGDVVQSGGSASVIQMNNISALEINSVREFMIGSLNQFYRLS 183          
BLAST of jgi.p|Trimin1|35968 vs. uniprot
Match: A0A3R7H5C6_9STRA (DNA replication complex GINS protein PSF2 n=4 Tax=Phytophthora kernoviae TaxID=325452 RepID=A0A3R7H5C6_9STRA)

HSP 1 Score: 130 bits (327), Expect = 1.050e-33
Identity = 77/182 (42.31%), Postives = 114/182 (62.64%), Query Frame = 0
Query:   19 LSPDELEYLAGDEMVEVVPS----ESHKRLHF-RGTYGPFVAGSRTAVPLWLAIMLKRRNKASIACPPWMTAESLERVLAAERREETFAELPFHYLEISSLLLSVAADDMGQQVDRMRVLLEDIENVRQGKMYKGM----GDAAQRADG---AIKVNRIGAMELLPVRTFFSAALSSMYDIS 188
            L+  E E+LA  E++ ++P     +++  L+F  G +GPF  G  T VPLWLA+MLK+ NK  I  P W++ ++L   L  E+  + F ELPFHYLE++SLLL  A +D+ +Q + +R LLED++NVRQ K+ KG+    GD  Q +DG   AI++N I A+E+  VR F   +L   Y +S
Sbjct:    4 LTASETEFLAEQELIAILPHFHLRDNNGMLNFISGDFGPFQPGIATHVPLWLAMMLKQLNKCRILPPSWLSVDNLTSRLEREKTSDVFEELPFHYLEVASLLLKNAPEDL-EQGEHIRSLLEDLQNVRQDKIRKGLSKIAGDVLQ-SDGSAYAIQMNNIAALEINSVREFMIGSLDQFYRVS 183          
BLAST of jgi.p|Trimin1|35968 vs. uniprot
Match: A0A0P1AAY9_PLAHL (DNA replication complex GINS protein PSF2 n=1 Tax=Plasmopara halstedii TaxID=4781 RepID=A0A0P1AAY9_PLAHL)

HSP 1 Score: 130 bits (326), Expect = 1.370e-33
Identity = 75/181 (41.44%), Postives = 105/181 (58.01%), Query Frame = 0
Query:   19 LSPDELEYLAGDEMVEVVPSESHKRLH------FRGTYGPFVAGSRTAVPLWLAIMLKRRNKASIACPPWMTAESLERVLAAERREETFAELPFHYLEISSLLLSVAADDMGQQVDRMRVLLEDIENVRQGKMYKGMGDAAQRADG-----AIKVNRIGAMELLPVRTFFSAALSSMYDIS 188
            LS  E E+LA  E++ ++P   H R H        G +GPF  G    VPLWLAIMLK+ +K  I  P W++ + L   L  E+  E F ELPFHYLEI+SLLL  A +D+ +Q + +R+LLED++NVRQ K+  G+   A          AI++N I A+E+  VR F   +L+  Y +S
Sbjct:    4 LSASETEFLAEQELIMIMP-HFHLRDHNGMLNFICGNFGPFQPGMTMHVPLWLAIMLKQVHKCRILAPSWLSVDYLSAQLEREKTSEVFEELPFHYLEIASLLLQNAPEDL-EQSEHLRILLEDLQNVRQDKIRNGLAKIALDVQNGGTALAIQMNNISALEITSVREFMLGSLNQFYQLS 182          
BLAST of jgi.p|Trimin1|35968 vs. uniprot
Match: G4ZBG3_PHYSP (DNA replication complex GINS protein PSF2 n=1 Tax=Phytophthora sojae (strain P6497) TaxID=1094619 RepID=G4ZBG3_PHYSP)

HSP 1 Score: 130 bits (326), Expect = 1.410e-33
Identity = 76/181 (41.99%), Postives = 109/181 (60.22%), Query Frame = 0
Query:   19 LSPDELEYLAGDEMVEVVPS----ESHKRLHF-RGTYGPFVAGSRTAVPLWLAIMLKRRNKASIACPPWMTAESLERVLAAERREETFAELPFHYLEISSLLLSVAADDMGQQVDRMRVLLEDIENVRQGKMYKGM----GDAAQRADGA--IKVNRIGAMELLPVRTFFSAALSSMYDIS 188
            LS  E E+LA  E++ ++P     +++  L+F  G +GPF  G  T VPLWLAIMLK+ NK  I  P W++ + L   L  E+  + F ELPFHYLE++SLLL  A +D+ Q  + +R LLED++NVRQ K+  G+    GD  Q    A  I++N I A+E+  VR F   +L+  Y +S
Sbjct:    4 LSASETEFLAEQELIAILPHFHLRDNNGMLNFISGDFGPFQPGITTHVPLWLAIMLKQLNKCRILAPSWLSVDYLMSRLEREKASDAFEELPFHYLEVASLLLKNAPEDLDQG-EHLRSLLEDLQNVRQDKIRNGLSRIAGDVVQSGGSASVIQMNNISALEINSVREFMIGSLNQFYRLS 183          
BLAST of jgi.p|Trimin1|35968 vs. uniprot
Match: A0A8J5IPD4_9STRA (Sld5 domain-containing protein n=1 Tax=Phytophthora aleatoria TaxID=2496075 RepID=A0A8J5IPD4_9STRA)

HSP 1 Score: 129 bits (325), Expect = 1.880e-33
Identity = 75/180 (41.67%), Postives = 108/180 (60.00%), Query Frame = 0
Query:   19 LSPDELEYLAGDEMVEVVPS----ESHKRLHF-RGTYGPFVAGSRTAVPLWLAIMLKRRNKASIACPPWMTAESLERVLAAERREETFAELPFHYLEISSLLLSVAADDMGQQVDRMRVLLEDIENVRQGKMYKGMGDAAQRADG-----AIKVNRIGAMELLPVRTFFSAALSSMYDIS 188
            LS  E E+LA  E++ ++P     +++  L+F  G +GPF  G  T VPLWLAIMLK+ NK  I  P W++ + L   L  E+  E F ELPFHYLE++SLLL  A +D+ Q  + +R LLED++NVRQ K+  G+   A    G     AI++N I A+E+  +R F   +L+  Y +S
Sbjct:    4 LSASETEFLAEQELIVIMPQFHLRDNNAMLNFIGGNFGPFQPGITTHVPLWLAIMLKQLNKCRILPPSWLSVDYLTARLEREKTSEVFEELPFHYLEVASLLLKNAPEDLDQG-EHLRSLLEDLQNVRQDKIRNGLIKIATDVQGGGTALAIQMNNISALEINSMREFMLGSLNQFYQLS 182          
The following BLAST results are available for this feature:
BLAST of jgi.p|Trimin1|35968 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A836CII2_9STRA1.580e-148100.00Sld5 domain-containing protein n=1 Tax=Tribonema m... [more]
D7G631_ECTSI9.090e-5753.51Sld5 domain-containing protein n=2 Tax=Ectocarpus ... [more]
A0A2D4C9F5_PYTIN4.800e-3542.78DNA replication complex GINS protein PSF2 n=1 Tax=... [more]
A0A225V0D2_9STRA1.180e-3442.78DNA replication complex GINS protein PSF2 n=1 Tax=... [more]
A0A2Z7API4_9LAMI1.890e-3440.98DNA replication complex GINS protein PSF2 n=1 Tax=... [more]
A0A6A3SX89_9STRA2.530e-3442.54DNA replication complex GINS protein PSF2 n=3 Tax=... [more]
A0A3R7H5C6_9STRA1.050e-3342.31DNA replication complex GINS protein PSF2 n=4 Tax=... [more]
A0A0P1AAY9_PLAHL1.370e-3341.44DNA replication complex GINS protein PSF2 n=1 Tax=... [more]
G4ZBG3_PHYSP1.410e-3341.99DNA replication complex GINS protein PSF2 n=1 Tax=... [more]
A0A8J5IPD4_9STRA1.880e-3341.67Sld5 domain-containing protein n=1 Tax=Phytophthor... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR021151GINS subunit, domain APFAMPF05916Sld5coord: 60..169
e-value: 2.8E-20
score: 72.8
NoneNo IPR availableGENE3D3.40.5.50coord: 19..83
e-value: 2.3E-20
score: 74.4
NoneNo IPR availableGENE3D1.20.58.1020coord: 85..199
e-value: 2.0E-27
score: 97.2
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 207..242
NoneNo IPR availableCDDcd11712GINS_A_psf2coord: 72..191
e-value: 3.12089E-41
score: 135.43
NoneNo IPR availableSUPERFAMILY160059PriA/YqbF domaincoord: 19..77
IPR007257DNA replication complex GINS protein Psf2PANTHERPTHR12772DNA REPLICATION COMPLEX GINS PROTEIN PSF2coord: 17..191
IPR036224GINS, helical bundle-like domain superfamilySUPERFAMILY158573GINS helical bundle-likecoord: 80..188

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Contig_191contigContig_191:131776..137335 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Tribonema minus UTEX_B_31562021-06-17
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
jgi.p|Trimin1|35968mRNA_17245Tribonema minus UTEX_B_3156 mRNAContig_191 131727..137350 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Trimin1|35968|CE35967_69 ID=Trimin1|35968|CE35967_69|Name=jgi.p|Trimin1|35968|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=243bp
MASHGVPEPGSEASTLRHLSPDELEYLAGDEMVEVVPSESHKRLHFRGTY
GPFVAGSRTAVPLWLAIMLKRRNKASIACPPWMTAESLERVLAAERREET
FAELPFHYLEISSLLLSVAADDMGQQVDRMRVLLEDIENVRQGKMYKGMG
DAAQRADGAIKVNRIGAMELLPVRTFFSAALSSMYDISGAKGRAEVARLQ
RVSAPDAMGGAAPKAGGGGGQYQGDLAAAPPPQQQSRLRRFR*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR021151GINS_A
IPR007257GINS_Psf2
IPR036224GINS_bundle-like_dom_sf