Trimin1|354713|estExt_Genemark1.C_Ctg_4440004 (polypeptide) Tribonema minus UTEX_B_3156

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
Namejgi.p|Trimin1|354713
Unique NameTrimin1|354713|estExt_Genemark1.C_Ctg_4440004
Typepolypeptide
OrganismTribonema minus UTEX_B_3156 (Tribonema minus UTEX_B_3156 )
Sequence length156
Homology
BLAST of jgi.p|Trimin1|354713 vs. uniprot
Match: A0A836CCC5_9STRA (Uncharacterized protein (Fragment) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CCC5_9STRA)

HSP 1 Score: 307 bits (786), Expect = 1.160e-105
Identity = 155/155 (100.00%), Postives = 155/155 (100.00%), Query Frame = 0
Query:    1 WPLQGRQRVLPERRAFQRHLLSCVRSSQAVAGSWSRGRRTSSASPARSGGHGRCSCSVAHTPADVIKTRLQVVAREGEATYRGISDCAAHIFAVTLWAYELLHKAVSSADPALQPRPPTNAPIEVGDYRDAFRRAHVSKRLDDIHNLIENLSNVK 155
            WPLQGRQRVLPERRAFQRHLLSCVRSSQAVAGSWSRGRRTSSASPARSGGHGRCSCSVAHTPADVIKTRLQVVAREGEATYRGISDCAAHIFAVTLWAYELLHKAVSSADPALQPRPPTNAPIEVGDYRDAFRRAHVSKRLDDIHNLIENLSNVK
Sbjct:    1 WPLQGRQRVLPERRAFQRHLLSCVRSSQAVAGSWSRGRRTSSASPARSGGHGRCSCSVAHTPADVIKTRLQVVAREGEATYRGISDCAAHIFAVTLWAYELLHKAVSSADPALQPRPPTNAPIEVGDYRDAFRRAHVSKRLDDIHNLIENLSNVK 155          
BLAST of jgi.p|Trimin1|354713 vs. uniprot
Match: A0A835ZEV5_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZEV5_9STRA)

HSP 1 Score: 179 bits (454), Expect = 3.030e-49
Identity = 95/118 (80.51%), Postives = 95/118 (80.51%), Query Frame = 0
Query:   61 TPADVIKTRLQVVAREGEATYRGISDCAAHI-----------------------FAVTLWAYELLHKAVSSADPALQPRPPTNAPIEVGDYRDAFRRAHVSKRLDDIHNLIENLSNVK 155
            TPADVIKTRLQVVAREGEATYRGISDCAAHI                       FAVTLWAYELLHKAVSSADPALQPRPPTNAPIEVGDYRDAFRRAHVSKRLDDIHNLIENLSNVK
Sbjct: 1019 TPADVIKTRLQVVAREGEATYRGISDCAAHIVRTEGVSALFKGAGMRVFRSSPQFAVTLWAYELLHKAVSSADPALQPRPPTNAPIEVGDYRDAFRRAHVSKRLDDIHNLIENLSNVK 1136          
BLAST of jgi.p|Trimin1|354713 vs. uniprot
Match: A0A4D9D3J4_9STRA (Uncharacterized protein n=2 Tax=Monodopsidaceae TaxID=425072 RepID=A0A4D9D3J4_9STRA)

HSP 1 Score: 85.5 bits (210), Expect = 1.960e-16
Identity = 51/111 (45.95%), Postives = 62/111 (55.86%), Query Frame = 0
Query:   61 TPADVIKTRLQVVAREGEATYRGISDCAAHIFA-----------------------VTLWAYELLHKAVSSADPALQPRPPTNAPIEVGDYRDAFRRAHVSKRLDDIHNLI 148
            TPADVIKTRLQV  R GE  Y G++DC A I+A                       VTL AYE L   +S   P ++PRPPTNAPI   DY DAFR+ H+S   D++ NL+
Sbjct:  743 TPADVIKTRLQVKPRPGEVAYEGMADCVAKIYAAEGITAFFKGAIMRVMRSSPQFGVTLLAYEGLRSFIS---PTMEPRPPTNAPISQSDY-DAFRKEHLSLMADNVSNLV 849          
BLAST of jgi.p|Trimin1|354713 vs. uniprot
Match: A0A7S1BC97_9STRA (Hypothetical protein n=1 Tax=Corethron hystrix TaxID=216773 RepID=A0A7S1BC97_9STRA)

HSP 1 Score: 75.1 bits (183), Expect = 4.350e-14
Identity = 44/114 (38.60%), Postives = 59/114 (51.75%), Query Frame = 0
Query:   61 TPADVIKTRLQVVAREGEATYRGISDCAAHI-----------------------FAVTLWAYELLHKAVSSADPALQPRPPTNAPIEVGDYRDAFRRAHVSKRLDDIHNLIENL 151
            TPADV+KTRLQVV REGE  Y G+ DC   I                       F VTL +YE+L + + + D      PPTNAP++  DY  AFR   +  + DDI +++ N+
Sbjct:   44 TPADVVKTRLQVVTREGEMAYTGMRDCTTKILKYEGFSAFFKGSGMRVFRSSPQFGVTLVSYEMLSRWMPNTD---NYNPPTNAPVDSKDYITAFRDRGIQDKADDIDSMMTNM 154          
BLAST of jgi.p|Trimin1|354713 vs. uniprot
Match: A0A7S2XI43_9STRA (Hypothetical protein n=2 Tax=Attheya septentrionalis TaxID=420275 RepID=A0A7S2XI43_9STRA)

HSP 1 Score: 77.0 bits (188), Expect = 1.800e-13
Identity = 48/115 (41.74%), Postives = 60/115 (52.17%), Query Frame = 0
Query:   61 TPADVIKTRLQVVAREGEATYRGISDCAAHI-----------------------FAVTLWAYELLHKAVSSADPALQPRPPTNAPIEVGDYRDAFRRAH-VSKRLDDIHNLIENL 151
            TPADVIKTRLQVV R+G+  Y G+ DCA  I                       FA+TL AYE L   +     A    PPTNAP++  DYR AF   H +S + DDI +L+ N+
Sbjct: 1008 TPADVIKTRLQVVTRDGDVAYTGMRDCATKIYKQEGWSAFYKGSGMRVSRSSPQFAITLLAYEKLGHFLGLGFDA----PPTNAPVDPRDYRSAFPTTHAISNKTDDIDSLLRNM 1118          
BLAST of jgi.p|Trimin1|354713 vs. uniprot
Match: A0A7S1BCR2_9STRA (Hypothetical protein n=2 Tax=Corethron hystrix TaxID=216773 RepID=A0A7S1BCR2_9STRA)

HSP 1 Score: 75.1 bits (183), Expect = 8.310e-13
Identity = 44/114 (38.60%), Postives = 59/114 (51.75%), Query Frame = 0
Query:   61 TPADVIKTRLQVVAREGEATYRGISDCAAHI-----------------------FAVTLWAYELLHKAVSSADPALQPRPPTNAPIEVGDYRDAFRRAHVSKRLDDIHNLIENL 151
            TPADV+KTRLQVV REGE  Y G+ DC   I                       F VTL +YE+L + + + D      PPTNAP++  DY  AFR   +  + DDI +++ N+
Sbjct:  841 TPADVVKTRLQVVTREGEMAYTGMRDCTTKILKYEGFSAFFKGSGMRVFRSSPQFGVTLVSYEMLSRWMPNTD---NYNPPTNAPVDSKDYITAFRDRGIQDKADDIDSMMTNM 951          
BLAST of jgi.p|Trimin1|354713 vs. uniprot
Match: A0A7S2K811_9STRA (Hypothetical protein n=1 Tax=Leptocylindrus danicus TaxID=163516 RepID=A0A7S2K811_9STRA)

HSP 1 Score: 69.7 bits (169), Expect = 6.090e-11
Identity = 46/96 (47.92%), Postives = 49/96 (51.04%), Query Frame = 0
Query:   61 TPADVIKTRLQVVAREGEATYRGISDCAAHI-----------------------FAVTLWAYELLHKAVSSADPALQPRPPTNAPIEVGDYRDAFR 133
            TPADVIKTRLQV AREGE TY GI DCA  I                       F +TL AYELL    S+  P     PPTNAP+   D R AFR
Sbjct:  675 TPADVIKTRLQVSAREGEMTYTGIRDCAWKIYKHEGISAFYKGSGMRVFRSSPQFGITLLAYELL----SNLLPGQHEAPPTNAPVNPHDLRSAFR 766          
BLAST of jgi.p|Trimin1|354713 vs. uniprot
Match: A0A7S1YWT6_TRICV (Hypothetical protein n=1 Tax=Trieres chinensis TaxID=1514140 RepID=A0A7S1YWT6_TRICV)

HSP 1 Score: 68.2 bits (165), Expect = 1.880e-10
Identity = 42/112 (37.50%), Postives = 55/112 (49.11%), Query Frame = 0
Query:   61 TPADVIKTRLQVVAREGEATYRGISDCAAHI-----------------------FAVTLWAYELLHKAVSSADPALQPRPPTNAPIEVGDYRDAF-RRAHVSKRLDDIHNLI 148
            TPADV+KTRLQVV REGE  Y G+ DC   +                       F +TL AYE L   +  +  A    PP NAPI+  DYR AF  +  +  + +DIH ++
Sbjct:  338 TPADVVKTRLQVVTREGEMAYSGVRDCCIKMYQQEGVSAFFKGSVMRVLRSSPQFGITLLAYEKLSHFIGGSHYA----PPVNAPIDPRDYRSAFPTQDAIGHKAEDIHEMV 445          
BLAST of jgi.p|Trimin1|354713 vs. uniprot
Match: F4Q1H9_CAVFA (EF-hand domain-containing protein n=1 Tax=Cavenderia fasciculata (strain SH3) TaxID=1054147 RepID=F4Q1H9_CAVFA)

HSP 1 Score: 66.2 bits (160), Expect = 9.600e-10
Identity = 44/109 (40.37%), Postives = 56/109 (51.38%), Query Frame = 0
Query:   61 TPADVIKTRLQVVAREGEATYRGISDCAAHI-----------------------FAVTLWAYELLHKAVSSADPALQPRPPTNAPIEVGDYRDAFRRAHVSKRLDDIHN 146
            TPADVIKTRLQV A+ GE TY GI DCA  I                       F VTL +YE+L K +    PA   RPPT+API   D++   RR    ++L ++ +
Sbjct:  592 TPADVIKTRLQVKAKTGEQTYEGIRDCAQKIWREEGFRAFFKGCVARVFRSSPQFGVTLLSYEMLQKHLLPHAPA---RPPTSAPISERDWK-TLRRTSAQEKLTEMED 696          
BLAST of jgi.p|Trimin1|354713 vs. uniprot
Match: A0A8J4UU69_9MYCE (Uncharacterized protein n=1 Tax=Polysphondylium violaceum TaxID=133409 RepID=A0A8J4UU69_9MYCE)

HSP 1 Score: 65.1 bits (157), Expect = 2.430e-9
Identity = 45/109 (41.28%), Postives = 55/109 (50.46%), Query Frame = 0
Query:   61 TPADVIKTRLQVVAREGEATYRGISDCAAHI-----------------------FAVTLWAYELLHKAVSSADPALQPRPPTNAPIEVGDYRDAFRRAHVSKRLDDIHN 146
            TPADVIKTRLQV A+ GE TY GI DCA  I                       F VTL +YELL K  +   P + PR PTNAPI   D+    R A   +++ ++ N
Sbjct:  625 TPADVIKTRLQVKAKAGEQTYSGIRDCAVKIMKEEGPRAFFKGCVARVCRSSPQFGVTLLSYELLQKYFA---PHVTPRVPTNAPITQKDFT-VLRGATPVEKIQEMEN 729          
The following BLAST results are available for this feature:
BLAST of jgi.p|Trimin1|354713 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A836CCC5_9STRA1.160e-105100.00Uncharacterized protein (Fragment) n=1 Tax=Tribone... [more]
A0A835ZEV5_9STRA3.030e-4980.51Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A4D9D3J4_9STRA1.960e-1645.95Uncharacterized protein n=2 Tax=Monodopsidaceae Ta... [more]
A0A7S1BC97_9STRA4.350e-1438.60Hypothetical protein n=1 Tax=Corethron hystrix Tax... [more]
A0A7S2XI43_9STRA1.800e-1341.74Hypothetical protein n=2 Tax=Attheya septentrional... [more]
A0A7S1BCR2_9STRA8.310e-1338.60Hypothetical protein n=2 Tax=Corethron hystrix Tax... [more]
A0A7S2K811_9STRA6.090e-1147.92Hypothetical protein n=1 Tax=Leptocylindrus danicu... [more]
A0A7S1YWT6_TRICV1.880e-1037.50Hypothetical protein n=1 Tax=Trieres chinensis Tax... [more]
F4Q1H9_CAVFA9.600e-1040.37EF-hand domain-containing protein n=1 Tax=Cavender... [more]
A0A8J4UU69_9MYCE2.430e-941.28Uncharacterized protein n=1 Tax=Polysphondylium vi... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR023395Mitochondrial carrier domain superfamilyGENE3D1.50.40.10Mitochondrial carrier domaincoord: 13..99
e-value: 1.6E-7
score: 32.4
IPR023395Mitochondrial carrier domain superfamilySUPERFAMILY103506Mitochondrial carriercoord: 40..92

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Contig_444contigContig_444:14964..17245 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Tribonema minus UTEX_B_31562021-06-17
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
jgi.p|Trimin1|354713mRNA_18879Tribonema minus UTEX_B_3156 mRNAContig_444 14964..17245 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Trimin1|354713|estExt_Genemark1.C_Ctg_4440004 ID=Trimin1|354713|estExt_Genemark1.C_Ctg_4440004|Name=jgi.p|Trimin1|354713|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=156bp
WPLQGRQRVLPERRAFQRHLLSCVRSSQAVAGSWSRGRRTSSASPARSGG
HGRCSCSVAHTPADVIKTRLQVVAREGEATYRGISDCAAHIFAVTLWAYE
LLHKAVSSADPALQPRPPTNAPIEVGDYRDAFRRAHVSKRLDDIHNLIEN
LSNVK*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR023395Mt_carrier_dom_sf