Trimin1|354682|estExt_Genemark1.C_Ctg_3840001 (polypeptide) Tribonema minus UTEX_B_3156

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
Namejgi.p|Trimin1|354682
Unique NameTrimin1|354682|estExt_Genemark1.C_Ctg_3840001
Typepolypeptide
OrganismTribonema minus UTEX_B_3156 (Tribonema minus UTEX_B_3156 )
Sequence length204
Homology
BLAST of jgi.p|Trimin1|354682 vs. uniprot
Match: A0A836CDX0_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CDX0_9STRA)

HSP 1 Score: 420 bits (1079), Expect = 9.340e-149
Identity = 203/203 (100.00%), Postives = 203/203 (100.00%), Query Frame = 0
Query:    1 MVHSEQHLGLERNRLYFGGDVGKRRDDGLDVVNFMHGRDDCEGIEVIKGVKLGGLPDALALVAQGKADPSEFKFFVRFCGWGPGQLAREVKLGAWYAAACDVGTVLDQYTDESQPAALWTEVLARMGGKYKTLAENSLCASAVGPRQLARKVKLGAWSAAACDMGTVLNQYTDESQPAALWTEVLARMGGKYKALAEMWGGHR 203
            MVHSEQHLGLERNRLYFGGDVGKRRDDGLDVVNFMHGRDDCEGIEVIKGVKLGGLPDALALVAQGKADPSEFKFFVRFCGWGPGQLAREVKLGAWYAAACDVGTVLDQYTDESQPAALWTEVLARMGGKYKTLAENSLCASAVGPRQLARKVKLGAWSAAACDMGTVLNQYTDESQPAALWTEVLARMGGKYKALAEMWGGHR
Sbjct:    1 MVHSEQHLGLERNRLYFGGDVGKRRDDGLDVVNFMHGRDDCEGIEVIKGVKLGGLPDALALVAQGKADPSEFKFFVRFCGWGPGQLAREVKLGAWYAAACDVGTVLDQYTDESQPAALWTEVLARMGGKYKTLAENSLCASAVGPRQLARKVKLGAWSAAACDMGTVLNQYTDESQPAALWTEVLARMGGKYKALAEMWGGHR 203          
BLAST of jgi.p|Trimin1|354682 vs. uniprot
Match: A0A835ZEY4_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZEY4_9STRA)

HSP 1 Score: 376 bits (966), Expect = 3.460e-129
Identity = 192/216 (88.89%), Postives = 192/216 (88.89%), Query Frame = 0
Query:    7 HL-GLERNRLYFGGDVGKRRDDGLDVVNFMHGRDDCEGIEVIKGVKLGGLPDALALVAQGKADPSEFKFFVRFCGWGPGQLAREVKLGAWYAAACDVGTVLDQYTDESQPAALWTEVLARMGGKYKTLAENS-----------------LCASAV-GPRQLARKVKLGAWSAAACDMGTVLNQYTDESQPAALWTEVLARMGGKYKALAEMWGGHR 203
            HL GLERNRLYFGGDVGKRRDDGLDVVNFMHGRDDCEGIEVIKGVKLGGLPDALALVAQGKADPSEFKFFVRFCGWGPGQLAREVKLGAWYAAACDVGTVLDQYTDESQPAALWTEVLARMGGKYKTLAEN                  LCA    GP QLARKVKLGAWSAAACDMGTVLNQYTDESQPAALWTEVLARMGGKYKALAEMWGGHR
Sbjct:  142 HLPGLERNRLYFGGDVGKRRDDGLDVVNFMHGRDDCEGIEVIKGVKLGGLPDALALVAQGKADPSEFKFFVRFCGWGPGQLAREVKLGAWYAAACDVGTVLDQYTDESQPAALWTEVLARMGGKYKTLAENGRLGARHNAVGVWGWLSVLCALLRWGPGQLARKVKLGAWSAAACDMGTVLNQYTDESQPAALWTEVLARMGGKYKALAEMWGGHR 357          
BLAST of jgi.p|Trimin1|354682 vs. uniprot
Match: A0A836CG07_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CG07_9STRA)

HSP 1 Score: 323 bits (829), Expect = 1.010e-110
Identity = 168/196 (85.71%), Postives = 168/196 (85.71%), Query Frame = 0
Query:   32 VNFMHGRDDCEGIEVIKGVKLGGLPDALALVAQGKADPSEFKFFVRFCGWGPGQLAREVKLGAWYAAACDVGTVLDQYTDESQPAALWTEVLARMGGKYKTLAE-------------------NS----LCASAV-GPRQLARKVKLGAWSAAACDMGTVLNQYTDESQPAALWTEVLARMGGKYKALAEMWGGHR 203
            VNFMHGRDDCEGIEVIKGVKLGGLPDALALVAQGKADPSEFKFFVRFCGWGPGQLAREVKLGAWYAAACDVGTVLDQYTDESQPAALWTEVLARMGGKYKTLAE                   NS    LCA    GP QLARKVKLGAWSAAACDMGTVLNQYTDESQPAALWTEVLARMGGKYKALAEMWGGHR
Sbjct:    3 VNFMHGRDDCEGIEVIKGVKLGGLPDALALVAQGKADPSEFKFFVRFCGWGPGQLAREVKLGAWYAAACDVGTVLDQYTDESQPAALWTEVLARMGGKYKTLAEKWGGADDLDSSYFNSYLNGNSGVPFLCALLRWGPGQLARKVKLGAWSAAACDMGTVLNQYTDESQPAALWTEVLARMGGKYKALAEMWGGHR 198          
BLAST of jgi.p|Trimin1|354682 vs. uniprot
Match: A0A835YX41_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YX41_9STRA)

HSP 1 Score: 170 bits (431), Expect = 9.220e-50
Identity = 81/129 (62.79%), Postives = 92/129 (71.32%), Query Frame = 0
Query:    6 QHLGLERNRLYFGGDVGKRRDDGLDVVNFMHGRDDCEGIEVIKGVKLGGLPDALALVAQGKADPSEFKFFVRFCGWGPGQLAREVKLGAWYAAACDVGTVLDQYTDESQPAALWTEVLARMGGKYKTLA 134
            Q  G E N LYFGGDV     DG D VN MHGR+D EG E++KGVKLGGL +ALA VA+G A P EFKFF R+CGW PGQL  EVK G WY AACDV T+LD Y  + QP  LW++VL RMGGKY  +A
Sbjct:  102 QIAGFEDNTLYFGGDVVSGTGDGTDAVNLMHGREDVEGTEILKGVKLGGLEEALARVAEGTAQPQEFKFFCRYCGWAPGQLQEEVKAGIWYLAACDVPTILDNYI-QGQPDGLWSDVLRRMGGKYADVA 229          
BLAST of jgi.p|Trimin1|354682 vs. uniprot
Match: A0A6H5JA69_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JA69_9PHAE)

HSP 1 Score: 153 bits (386), Expect = 1.340e-41
Identity = 71/118 (60.17%), Postives = 86/118 (72.88%), Query Frame = 0
Query:    9 GLERNRLYFGGDVGKRRDDGLDVVNFMHGRDDCEGIEVIKGVKLGGLPDALALVAQGKADPSEFKFFVRFCGWGPGQLAREVKLGAWYAAACDVGTVLDQYTDESQPAALWTEVLARM 126
            G+E N LY GGDV   RDDGLDVVN MHGR+D  G+EV+KG++LGGL +ALALVAQG+A P EFKFF R+ GWGPGQL  EV  GAW  AACD+ +VL+      QP   W E++ R+
Sbjct:  227 GMEDNVLYMGGDVTGARDDGLDVVNLMHGREDVPGMEVVKGLRLGGLKEALALVAQGRAQPEEFKFFSRYSGWGPGQLEAEVLAGAWELAACDLESVLESQNHPDQPGHFWGEIMGRL 344          
BLAST of jgi.p|Trimin1|354682 vs. uniprot
Match: D7FWE5_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FWE5_ECTSI)

HSP 1 Score: 139 bits (349), Expect = 8.920e-39
Identity = 65/109 (59.63%), Postives = 79/109 (72.48%), Query Frame = 0
Query:   18 GGDVGKRRDDGLDVVNFMHGRDDCEGIEVIKGVKLGGLPDALALVAQGKADPSEFKFFVRFCGWGPGQLAREVKLGAWYAAACDVGTVLDQYTDESQPAALWTEVLARM 126
            GGDV   RDDGLDVVN MHGR D  G+EV+KG++LGGL +ALALVAQG+A P EFKFF R+ GWGPGQL  EV  GAW  AACD+ +VL+      QP   W +++ R+
Sbjct:    2 GGDVTGARDDGLDVVNLMHGRADVPGMEVVKGLRLGGLKEALALVAQGRAQPEEFKFFSRYSGWGPGQLEAEVLGGAWELAACDLESVLESQNHPDQPGHFWGKIMGRL 110          
BLAST of jgi.p|Trimin1|354682 vs. uniprot
Match: A0A7S0S201_9CHLO (Hypothetical protein n=1 Tax=Chlamydomonas leiostraca TaxID=1034604 RepID=A0A7S0S201_9CHLO)

HSP 1 Score: 99.0 bits (245), Expect = 3.270e-21
Identity = 58/123 (47.15%), Postives = 70/123 (56.91%), Query Frame = 0
Query:   15 LYFGGDVGKRRDDGLDVVNFMHGRDDCE-GIEVIKGVKLGGLPDALALVAQGKADPSEFKFFVRFCGWGPGQLAREVKLGAWYAAACDVGTVLDQYTDESQPAALWTEVLARMGGKYKTLAEN 136
            L+ GGDVG     G DV   +H R D     EV+KGV LGG+  A  LVA GKADP EFK++V++ GWGPGQL  E K G W+ AA     +L +    S     W EVL  MGG Y  L+ N
Sbjct:  200 LHVGGDVG-----GGDVA-VLHARTDLPLSKEVVKGVHLGGVDAARELVAAGKADPLEFKWYVKYAGWGPGQLESECKAGVWFTAAASARVILGE-ARASDGCDRWHEVLGLMGGDYAELSMN 315          
BLAST of jgi.p|Trimin1|354682 vs. uniprot
Match: A0A7S4DEL3_HETAK (Hypothetical protein (Fragment) n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S4DEL3_HETAK)

HSP 1 Score: 92.0 bits (227), Expect = 9.310e-19
Identity = 52/119 (43.70%), Postives = 73/119 (61.34%), Query Frame = 0
Query:   15 LYFGGDVG--KRRDDGL---DVVNFMHGRDDC-EGIEVIKG-VKLGGLPDALALVAQGKADPSEFKFFVRFCGWGPGQLAREVKLGAWYAAACDVGTVLDQYTDESQPAALWTEVLARM 126
            +Y+GG+VG  + R DGL   + VN +H +    EG  V +G + LGGL +A   V +G+A P +FKFF ++CGW PGQLA E++ G W  AA D GTVL Q   ++    +W  +L RM
Sbjct:  172 VYYGGEVGAGRTRADGLLCLECVNVLHRQPGYREGAAVGRGGLWLGGLGEAARAVREGRAAPGDFKFFTKYCGWAPGQLAGEMRDGLWLVAAVDEGTVLGQDPRDATGRGMWRGILERM 290          
BLAST of jgi.p|Trimin1|354682 vs. uniprot
Match: A0A7S2AN37_9CHLO (Hypothetical protein (Fragment) n=1 Tax=Pycnococcus provasolii TaxID=41880 RepID=A0A7S2AN37_9CHLO)

HSP 1 Score: 85.1 bits (209), Expect = 1.950e-16
Identity = 49/125 (39.20%), Postives = 66/125 (52.80%), Query Frame = 0
Query:   14 RLYFGGDVGKRRDDGLDVVNFMHGRDDCEGI-EVIKGVKLGGLPDALALVAQGKADPSEFKFFVRFCGWGPGQLAREVKLGAWYAAACDVGTVLDQYTDESQPAALWTEVLARMGGKYKTLAENS 137
            RLYFGGDVG         V  +HG  D +G  EV  GV LGG    +  V+ G + P ++KFF + CGWG GQL REV+ G W+  +     +L Q     +P  LW EV+   GG     A+++
Sbjct:  134 RLYFGGDVG------AGTVLVIHGDGDVDGAREVTTGVYLGGYDSVVERVSDGSSKPQDYKFFSKCCGWGAGQLDREVEAGVWHPVSAARPLLLKQVLQLPKP--LWREVMELCGGDLADEAKDA 250          
BLAST of jgi.p|Trimin1|354682 vs. uniprot
Match: A0A830HZ81_9CHLO (Uncharacterized protein n=1 Tax=Pycnococcus provasolii TaxID=41880 RepID=A0A830HZ81_9CHLO)

HSP 1 Score: 84.7 bits (208), Expect = 1.170e-15
Identity = 49/125 (39.20%), Postives = 66/125 (52.80%), Query Frame = 0
Query:   14 RLYFGGDVGKRRDDGLDVVNFMHGRDDCEGI-EVIKGVKLGGLPDALALVAQGKADPSEFKFFVRFCGWGPGQLAREVKLGAWYAAACDVGTVLDQYTDESQPAALWTEVLARMGGKYKTLAENS 137
            RLYFGGDVG         V  +HG  D +G  EV  GV LGG    +  V+ G + P ++KFF + CGWG GQL REV+ G W+  +     +L Q     +P  LW EV+   GG     A+++
Sbjct:  319 RLYFGGDVG------AGTVLVIHGDGDVDGAREVTTGVYLGGYDSVVERVSDGSSKPQDYKFFSKCCGWGAGQLDREVEAGVWHPVSAARPLLLKQCLQLPKP--LWREVMELCGGDLADEAKDA 435          
The following BLAST results are available for this feature:
BLAST of jgi.p|Trimin1|354682 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A836CDX0_9STRA9.340e-149100.00Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A835ZEY4_9STRA3.460e-12988.89Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A836CG07_9STRA1.010e-11085.71Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A835YX41_9STRA9.220e-5062.79Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A6H5JA69_9PHAE1.340e-4160.17Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7FWE5_ECTSI8.920e-3959.63Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A7S0S201_9CHLO3.270e-2147.15Hypothetical protein n=1 Tax=Chlamydomonas leiostr... [more]
A0A7S4DEL3_HETAK9.310e-1943.70Hypothetical protein (Fragment) n=1 Tax=Heterosigm... [more]
A0A7S2AN37_9CHLO1.950e-1639.20Hypothetical protein (Fragment) n=1 Tax=Pycnococcu... [more]
A0A830HZ81_9CHLO1.170e-1539.20Uncharacterized protein n=1 Tax=Pycnococcus provas... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR003774Protein of unknown function UPF0301PFAMPF02622DUF179coord: 13..127
e-value: 2.2E-15
score: 57.0
NoneNo IPR availableGENE3D3.40.1740.10coord: 140..202
e-value: 3.7E-6
score: 28.4
coord: 2..139
e-value: 3.6E-25
score: 90.4
NoneNo IPR availablePANTHERPTHR31984TRANSPORTER, PUTATIVE (DUF179)-RELATEDcoord: 11..135
coord: 144..197
NoneNo IPR availableSUPERFAMILY143456VC0467-likecoord: 11..135

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Contig_384contigContig_384:615..11348 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Tribonema minus UTEX_B_31562021-06-17
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
jgi.p|Trimin1|354682mRNA_19137Tribonema minus UTEX_B_3156 mRNAContig_384 615..11348 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Trimin1|354682|estExt_Genemark1.C_Ctg_3840001 ID=Trimin1|354682|estExt_Genemark1.C_Ctg_3840001|Name=jgi.p|Trimin1|354682|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=204bp
MVHSEQHLGLERNRLYFGGDVGKRRDDGLDVVNFMHGRDDCEGIEVIKGV
KLGGLPDALALVAQGKADPSEFKFFVRFCGWGPGQLAREVKLGAWYAAAC
DVGTVLDQYTDESQPAALWTEVLARMGGKYKTLAENSLCASAVGPRQLAR
KVKLGAWSAAACDMGTVLNQYTDESQPAALWTEVLARMGGKYKALAEMWG
GHR*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR003774UPF0301