Trimin1|354591|estExt_Genemark1.C_Ctg_2810003 (polypeptide) Tribonema minus UTEX_B_3156

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
Namejgi.p|Trimin1|354591
Unique NameTrimin1|354591|estExt_Genemark1.C_Ctg_2810003
Typepolypeptide
OrganismTribonema minus UTEX_B_3156 (Tribonema minus UTEX_B_3156 )
Sequence length250
Homology
BLAST of jgi.p|Trimin1|354591 vs. uniprot
Match: A0A836CH18_9STRA (HMA domain-containing protein (Fragment) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CH18_9STRA)

HSP 1 Score: 469 bits (1208), Expect = 7.140e-167
Identity = 250/250 (100.00%), Postives = 250/250 (100.00%), Query Frame = 0
Query:    1 MASLTDIDAAASAASTAAVTCHSWAKSPTTLGLLTGLLASNCCVIQLVLNLLGTGCAGFRKLEAYKPVWLALNAVALARCCSAAAISSGPLGALRSRAMALTHGRWRKLAITLFCLSLTFSEDALRAWNNRGVRRGGKPPRLPSESSPAAPTLDAAVCAAEARHGVTLQVGEGEPVHERVDAVHLTIGGMRCEGCRRGVISALAAVPGVVTVTVSMAGTAAIVLHAHANREDTIRQAVDAVAMAGFSATP 250
            MASLTDIDAAASAASTAAVTCHSWAKSPTTLGLLTGLLASNCCVIQLVLNLLGTGCAGFRKLEAYKPVWLALNAVALARCCSAAAISSGPLGALRSRAMALTHGRWRKLAITLFCLSLTFSEDALRAWNNRGVRRGGKPPRLPSESSPAAPTLDAAVCAAEARHGVTLQVGEGEPVHERVDAVHLTIGGMRCEGCRRGVISALAAVPGVVTVTVSMAGTAAIVLHAHANREDTIRQAVDAVAMAGFSATP
Sbjct:    1 MASLTDIDAAASAASTAAVTCHSWAKSPTTLGLLTGLLASNCCVIQLVLNLLGTGCAGFRKLEAYKPVWLALNAVALARCCSAAAISSGPLGALRSRAMALTHGRWRKLAITLFCLSLTFSEDALRAWNNRGVRRGGKPPRLPSESSPAAPTLDAAVCAAEARHGVTLQVGEGEPVHERVDAVHLTIGGMRCEGCRRGVISALAAVPGVVTVTVSMAGTAAIVLHAHANREDTIRQAVDAVAMAGFSATP 250          
BLAST of jgi.p|Trimin1|354591 vs. uniprot
Match: A0A0D2N0M1_9CHLO (HMA domain-containing protein n=1 Tax=Monoraphidium neglectum TaxID=145388 RepID=A0A0D2N0M1_9CHLO)

HSP 1 Score: 65.5 bits (158), Expect = 5.170e-9
Identity = 67/191 (35.08%), Postives = 88/191 (46.07%), Query Frame = 0
Query:   31 LGLLTG-LLASNCCVIQLVLNLLGTGCAGFRKLEAYKPVWLALNAVALARCCSAAAISSGPLGALRSRAMALTHGRWRKLAITLFC-LSLTFSEDALRAWNNRGVRRGGKPPRLPSESSPAAPTLDAAVCAAEARHGVTLQVGEGEP--VHERVDAVHLTIGGMRCEGCRRGVISALAAVPGVVTVTVSMA 217
            LG LTG LL+S+CC++QLVLN L  GCAGF   + Y+ +   L A              G L  L +R     HG  R+   T+ C + LTFSEDAL   N    R+G     L   S P               HG      + +P  V  RVD     + GMRC+ C   +  ++AA+PGV   TV +A
Sbjct:   18 LGALTGGLLSSSCCIVQLVLNSLSVGCAGFSVFKPYRNLLRVLTA--------------GMLALLLAR-----HGVNRRTIGTVVCSVLLTFSEDALSVIN----RQGSLQDLLRHMSLP---------------HGGGHPAVQRDPAIVRWRVD-----VDGMRCQACAARIRGSVAALPGVRNATVELA 165          
BLAST of jgi.p|Trimin1|354591 vs. uniprot
Match: A0A818CQU7_9BILA (Hypothetical protein n=4 Tax=unclassified Rotaria TaxID=2631648 RepID=A0A818CQU7_9BILA)

HSP 1 Score: 59.7 bits (143), Expect = 1.980e-7
Identity = 38/104 (36.54%), Postives = 56/104 (53.85%), Query Frame = 0
Query:   32 GLLTGLLASNCCVIQLVLNLLGTGCAGFRKLEA-YKPVWLALNAVALARCCSAAAISSGPLGALRSRAMALTHGRWRKLAITLFCLSLTFSEDALRAWNNRGVR 134
            GL+ GLL S+CC+IQLVLNL G GCAG   L   Y+P++++L  ++L                 R R       +W   ++ +F L L+FS + LR +NN+  R
Sbjct:    9 GLIGGLLISSCCLIQLVLNLFGIGCAGLNTLLLPYRPLFISLTIISLT------------YSFFRYR-----PSKWHFTSVVIFTLILSFSPELLRIYNNQFTR 95          
BLAST of jgi.p|Trimin1|354591 vs. uniprot
Match: A0A8H7ULF6_9FUNG (HMA domain-containing protein n=1 Tax=Umbelopsis vinacea TaxID=44442 RepID=A0A8H7ULF6_9FUNG)

HSP 1 Score: 58.2 bits (139), Expect = 8.680e-7
Identity = 40/100 (40.00%), Postives = 51/100 (51.00%), Query Frame = 0
Query:   33 LLTGLLASNCCVIQLVLNLLGTGCAGFRKLEAYKPVWLALNAVALARCCSAAAISSGPLGALRSRAMALTHGRWRKLAITLFCLSLTFSEDALRAWNNRG 132
            LL+ LL+S+CCVIQLVLNL    CAGF  L  Y+P  +AL AV+L+    +  + S  LG                  I L CL L  S DA+  +N  G
Sbjct:   18 LLSALLSSSCCVIQLVLNLFSFSCAGFSILTPYRPYLVALTAVSLSYTLFSRGLDSETLG------------------IVLLCLLLMVSPDAVDYYNRTG 99          
BLAST of jgi.p|Trimin1|354591 vs. uniprot
Match: A8IX44_CHLRE (Predicted protein n=2 Tax=Chlamydomonas reinhardtii TaxID=3055 RepID=A8IX44_CHLRE)

HSP 1 Score: 57.4 bits (137), Expect = 5.240e-6
Identity = 38/101 (37.62%), Postives = 50/101 (49.50%), Query Frame = 0
Query:   33 LLTGLLASNCCVIQLVLNLLGTGCAGFRKLEAYKPVWLALNAVALARCCSAAAISSGPLGALRSRAMALTHGRWRKLAITLFCLSLTFSEDALRAWNNRGV 133
            LL GL AS+CCV+QL LN +G GCAGF  L  Y+P++  +   ALA        S+                  R L  T   L L FS+DA+R +N  G+
Sbjct:   27 LLGGLGASSCCVLQLALNAVGLGCAGFAVLTPYEPIFKGITLAALAHLLLRDGFSNR-----------------RALLTTALSLGLLFSQDAVRFYNRGGL 110          
BLAST of jgi.p|Trimin1|354591 vs. uniprot
Match: A0A433QKS1_9FUNG (HMA domain-containing protein n=1 Tax=Jimgerdemannia flammicorona TaxID=994334 RepID=A0A433QKS1_9FUNG)

HSP 1 Score: 55.1 bits (131), Expect = 1.140e-5
Identity = 29/47 (61.70%), Postives = 35/47 (74.47%), Query Frame = 0
Query:   31 LGLLTGLLASNCCVIQLVLNLLGTGCAGFRKLEAYKPVWLALNAVAL 77
            L LLT LLAS+CCVIQL+LNL    CAGF  L  Y+PV+ AL A++L
Sbjct:    7 LPLLTSLLASSCCVIQLLLNLFSVSCAGFAILTPYRPVFTALTALSL 53          
BLAST of jgi.p|Trimin1|354591 vs. uniprot
Match: A0A7R9YST7_9CHLO (Hypothetical protein n=1 Tax=Chlamydomonas euryale TaxID=1486919 RepID=A0A7R9YST7_9CHLO)

HSP 1 Score: 55.1 bits (131), Expect = 1.750e-5
Identity = 60/178 (33.71%), Postives = 78/178 (43.82%), Query Frame = 0
Query:   37 LLASNCCVIQLVLNLLGTGCAGFRKLEAYKPVWLALNAVALARCCSAAAISSGPLGALRSRAMALTHGRWRKLAITLFCLSLTFSEDALRAWNNRGVRRGGKPPRLPSESSPAAPTLDAAVCAAEARHGVTLQVGEGEPVHERVDAVHLTIGGMRCEGCRRGVISALAAVPGVVTVTV 214
            L+ASNCCV+QLVLN L  GCAGF  L+ YK V  AL  + + R           L A+R R         R  A     L L  S+D L AW NR           P+ SS    ++     +  A      Q G+    H  V    +   GM+CEGC   V +AL  V G+  V++
Sbjct:   37 LVASNCCVLQLVLNSLSLGCAGFAALDPYKGVGRALAVMCVGRLL---------LKAVRQRER-------RAGAFAAISLLLLASQDVL-AWTNRNP--------TPASSS----SVSWWWRSWHATASPMSQHGQNAGAHFVVYCFEVQ--GMKCEGCAARVKAALLEVEGIEEVSI 183          
BLAST of jgi.p|Trimin1|354591 vs. uniprot
Match: A0A397S9E4_9GLOM (HMA domain-containing protein n=1 Tax=Glomus cerebriforme TaxID=658196 RepID=A0A397S9E4_9GLOM)

HSP 1 Score: 52.8 bits (125), Expect = 7.670e-5
Identity = 22/43 (51.16%), Postives = 33/43 (76.74%), Query Frame = 0
Query:   33 LLTGLLASNCCVIQLVLNLLGTGCAGFRKLEAYKPVWLALNAV 75
            ++TGLL+S+CC+IQLVLN+   GCAGF  L  Y+P++L+   +
Sbjct:   18 IITGLLSSSCCIIQLVLNIFSIGCAGFSILTPYRPIFLSFTTI 60          
The following BLAST results are available for this feature:
BLAST of jgi.p|Trimin1|354591 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 8
Match NameE-valueIdentityDescription
A0A836CH18_9STRA7.140e-167100.00HMA domain-containing protein (Fragment) n=1 Tax=T... [more]
A0A0D2N0M1_9CHLO5.170e-935.08HMA domain-containing protein n=1 Tax=Monoraphidiu... [more]
A0A818CQU7_9BILA1.980e-736.54Hypothetical protein n=4 Tax=unclassified Rotaria ... [more]
A0A8H7ULF6_9FUNG8.680e-740.00HMA domain-containing protein n=1 Tax=Umbelopsis v... [more]
A8IX44_CHLRE5.240e-637.62Predicted protein n=2 Tax=Chlamydomonas reinhardti... [more]
A0A433QKS1_9FUNG1.140e-561.70HMA domain-containing protein n=1 Tax=Jimgerdemann... [more]
A0A7R9YST7_9CHLO1.750e-533.71Hypothetical protein n=1 Tax=Chlamydomonas euryale... [more]
A0A397S9E4_9GLOM7.670e-551.16HMA domain-containing protein n=1 Tax=Glomus cereb... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR006121Heavy metal-associated domain, HMAPFAMPF00403HMAcoord: 186..239
e-value: 3.5E-7
score: 30.5
IPR006121Heavy metal-associated domain, HMAPROSITEPS50846HMA_2coord: 182..250
score: 14.260996
IPR006121Heavy metal-associated domain, HMACDDcd00371HMAcoord: 185..249
e-value: 7.53891E-7
score: 43.3633
NoneNo IPR availableGENE3D3.30.70.100coord: 183..250
e-value: 1.7E-11
score: 46.6
IPR036163Heavy metal-associated domain superfamilySUPERFAMILY55008HMA, heavy metal-associated domaincoord: 180..248

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Contig_281contigContig_281:21550..23462 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Tribonema minus UTEX_B_31562021-06-17
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
jgi.p|Trimin1|354591mRNA_18715Tribonema minus UTEX_B_3156 mRNAContig_281 21550..23463 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Trimin1|354591|estExt_Genemark1.C_Ctg_2810003 ID=Trimin1|354591|estExt_Genemark1.C_Ctg_2810003|Name=jgi.p|Trimin1|354591|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=250bp
MASLTDIDAAASAASTAAVTCHSWAKSPTTLGLLTGLLASNCCVIQLVLN
LLGTGCAGFRKLEAYKPVWLALNAVALARCCSAAAISSGPLGALRSRAMA
LTHGRWRKLAITLFCLSLTFSEDALRAWNNRGVRRGGKPPRLPSESSPAA
PTLDAAVCAAEARHGVTLQVGEGEPVHERVDAVHLTIGGMRCEGCRRGVI
SALAAVPGVVTVTVSMAGTAAIVLHAHANREDTIRQAVDAVAMAGFSATP
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR006121HMA_dom
IPR036163HMA_dom_sf