Trimin1|354492|estExt_Genemark1.C_Ctg_2550007 (polypeptide) Tribonema minus UTEX_B_3156

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
Namejgi.p|Trimin1|354492
Unique NameTrimin1|354492|estExt_Genemark1.C_Ctg_2550007
Typepolypeptide
OrganismTribonema minus UTEX_B_3156 (Tribonema minus UTEX_B_3156 )
Sequence length104
Homology
BLAST of jgi.p|Trimin1|354492 vs. uniprot
Match: A0A835YYZ4_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YYZ4_9STRA)

HSP 1 Score: 197 bits (502), Expect = 5.070e-64
Identity = 103/103 (100.00%), Postives = 103/103 (100.00%), Query Frame = 0
Query:    1 MVVAAERVCTTPELLERLRRLSRGDEGFAAAVAALTANFEKFEESGLWEQPNRAAHRRDKDQNFIGYTYKRAPQRPARAAVGGANFEGAGGXXXGSLGMSGHR 103
            MVVAAERVCTTPELLERLRRLSRGDEGFAAAVAALTANFEKFEESGLWEQPNRAAHRRDKDQNFIGYTYKRAPQRPARAAVGGANFEGAGGXXXGSLGMSGHR
Sbjct:    1 MVVAAERVCTTPELLERLRRLSRGDEGFAAAVAALTANFEKFEESGLWEQPNRAAHRRDKDQNFIGYTYKRAPQRPARAAVGGANFEGAGGXXXGSLGMSGHR 103          
BLAST of jgi.p|Trimin1|354492 vs. uniprot
Match: A0A835Z234_9STRA (NDR and related serine/threonine kinase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z234_9STRA)

HSP 1 Score: 166 bits (420), Expect = 6.030e-47
Identity = 87/91 (95.60%), Postives = 87/91 (95.60%), Query Frame = 0
Query:   13 ELLERLRRLSRGDEGFAAAVAALTANFEKFEESGLWEQPNRAAHRRDKDQNFIGYTYKRAPQRPARAAVGGANFEGAGGXXXGSLGMSGHR 103
            ELLERLR    GDEGFAAAVAALTANFEKFEESGLWEQPNRAAHRRDKDQNFIGYTYKRAPQRPARAAVGGANFEGAGGXXXGSLGMSGHR
Sbjct:  429 ELLERLRXXXXGDEGFAAAVAALTANFEKFEESGLWEQPNRAAHRRDKDQNFIGYTYKRAPQRPARAAVGGANFEGAGGXXXGSLGMSGHR 519          
BLAST of jgi.p|Trimin1|354492 vs. uniprot
Match: A0A6H5L5B9_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5L5B9_9PHAE)

HSP 1 Score: 70.9 bits (172), Expect = 4.140e-12
Identity = 36/76 (47.37%), Postives = 50/76 (65.79%), Query Frame = 0
Query:   13 ELLERLRRLSRGDEGFAAAVAALTANFEKFEESG--LWEQPNRAAHRRDKDQNFIGYTYKRAPQRPARAAVGGANF 86
            ++L +L +L  GD   AAAV  +T+NF+KF ++G   WE+  R A RRD+D +FIGYTYKR   +P R  +GG  F
Sbjct:  504 DVLAQLSKLEPGDARQAAAVELVTSNFDKFSDNGEVRWEKAARVAQRRDRDNDFIGYTYKRKVNKPDRGGLGGDLF 579          
BLAST of jgi.p|Trimin1|354492 vs. uniprot
Match: A0A7S2UWM6_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2UWM6_9STRA)

HSP 1 Score: 58.9 bits (141), Expect = 3.260e-8
Identity = 32/72 (44.44%), Postives = 44/72 (61.11%), Query Frame = 0
Query:   14 LLERLRRLSRGDEGFAAAVAALTANFEKFEESGLWEQPNRAAHRRDKDQNFIGYTYKRAPQRPARAAVGGAN 85
            +LE++  ++ GD      VA +T NF+ FEE G     ++ A RRDKDQNFIGYT+KR  + P +   GG N
Sbjct:  113 ILEQIGTMNAGDVNLPPLVAQITRNFDHFEEDGDRWGADKRAMRRDKDQNFIGYTFKR--RDPKKQQEGGGN 182          
BLAST of jgi.p|Trimin1|354492 vs. uniprot
Match: A0A835Z9M2_9STRA (Kinase-like domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z9M2_9STRA)

HSP 1 Score: 53.1 bits (126), Expect = 6.760e-6
Identity = 35/79 (44.30%), Postives = 45/79 (56.96%), Query Frame = 0
Query:   14 LLERLRRLSRGDEGFAAAVAALTANFEKFEES--GLWEQPNRAAHRRDKDQNFIGYTYKRAPQRPARAAVGGANFEGAG 90
            LLE++R L   D   AAAV  LT+NF+ FEE     W    +   RRDKD +F+GYT++RA    AR AV  + F   G
Sbjct:  429 LLEQIRTLDARDGRMAAAVNQLTSNFDDFEEEDQSRWGGQKKVG-RRDKDNDFVGYTFRRAAPG-ARGAVATSLFSAEG 505          
BLAST of jgi.p|Trimin1|354492 vs. uniprot
Match: A0A7S2GB95_9STRA (Hypothetical protein n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2GB95_9STRA)

HSP 1 Score: 52.4 bits (124), Expect = 1.120e-5
Identity = 27/70 (38.57%), Postives = 42/70 (60.00%), Query Frame = 0
Query:   13 ELLERLRRLSRGDEGFAAAVAALTANFEKFEESGL-WEQPNRAAHRRDKDQNFIGYTYKRAPQRPARAAV 81
            ++LE +R L   D  FA  V+A+T NF+ F++ G  W+  +R A R  +D  FIGYTY++   +  R A+
Sbjct:  216 DMLELVRDLDATDPRFAPLVSAVTKNFDNFDDDGHGWDPADRDATRHHRDNEFIGYTYRKPGGQKERPAM 285          
BLAST of jgi.p|Trimin1|354492 vs. uniprot
Match: A0A836CMY7_9STRA (Serine/threonine-protein kinase 38 n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CMY7_9STRA)

HSP 1 Score: 50.1 bits (118), Expect = 8.150e-5
Identity = 29/60 (48.33%), Postives = 35/60 (58.33%), Query Frame = 0
Query:   14 LLERLRRLSRGDEGFAAAVAALTANFEKFEE--SGLWEQPNRAAHRRDKDQNFIGYTYKR 71
            LL  +R L   D   AAAV  LTANF+ FEE  +  W    +   RRDKD +F+GYTY R
Sbjct:  428 LLSSIRTLEPSDARMAAAVNQLTANFDDFEEEETSRWGGQKKVG-RRDKDNDFVGYTYSR 486          
The following BLAST results are available for this feature:
BLAST of jgi.p|Trimin1|354492 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 7
Match NameE-valueIdentityDescription
A0A835YYZ4_9STRA5.070e-64100.00Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A835Z234_9STRA6.030e-4795.60NDR and related serine/threonine kinase n=1 Tax=Tr... [more]
A0A6H5L5B9_9PHAE4.140e-1247.37Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
A0A7S2UWM6_9STRA3.260e-844.44Hypothetical protein n=1 Tax=Fibrocapsa japonica T... [more]
A0A835Z9M2_9STRA6.760e-644.30Kinase-like domain-containing protein n=1 Tax=Trib... [more]
A0A7S2GB95_9STRA1.120e-538.57Hypothetical protein n=1 Tax=Florenciella parvula ... [more]
A0A836CMY7_9STRA8.150e-548.33Serine/threonine-protein kinase 38 n=1 Tax=Tribone... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Contig_255contigContig_255:58957..60003 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Tribonema minus UTEX_B_31562021-06-17
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
jgi.p|Trimin1|354492mRNA_18277Tribonema minus UTEX_B_3156 mRNAContig_255 58673..60365 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Trimin1|354492|estExt_Genemark1.C_Ctg_2550007 ID=Trimin1|354492|estExt_Genemark1.C_Ctg_2550007|Name=jgi.p|Trimin1|354492|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=104bp
MVVAAERVCTTPELLERLRRLSRGDEGFAAAVAALTANFEKFEESGLWEQ
PNRAAHRRDKDQNFIGYTYKRAPQRPARAAVGGANFEGAGGGGGGSLGMS
GHR*
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