Trimin1|354458|estExt_Genemark1.C_Ctg_2510002 (polypeptide) Tribonema minus UTEX_B_3156

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
Namejgi.p|Trimin1|354458
Unique NameTrimin1|354458|estExt_Genemark1.C_Ctg_2510002
Typepolypeptide
OrganismTribonema minus UTEX_B_3156 (Tribonema minus UTEX_B_3156 )
Sequence length849
Homology
BLAST of jgi.p|Trimin1|354458 vs. uniprot
Match: A0A835YYU5_9STRA (DNA polymerase beta n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YYU5_9STRA)

HSP 1 Score: 1454 bits (3764), Expect = 0.000e+0
Identity = 848/848 (100.00%), Postives = 848/848 (100.00%), Query Frame = 0
Query:    1 MIAPRAAALGQPPFADRAILAKQLRFRAVARKYAELLEAALQDIEAAEREEQEADRDRRRRLKCPQHAAHEITSQEVQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAPLQPSADIGASVIDGGAGAGEAVEGQAAAAKSATRSQRPAAPPPTAVSLLASMAEAAGGGRQAGSGKRGDVHRAAVAGTPQLQASAEAPAQRNGKRARVAKGKKAGGGKEGGYLSGLCIYVVRLGSVTRRIRDMLLNRVLDAGGAVTDTYDAAATTHVVADASVPRDAILAHAGWGAHAERDSVVVASLAWLQGCLAERALLPLRTDIICGPGAYVLPSQXXXXXXXXXXLTENIICSPGAYVPPEPXXXXXXXXXXXARAMAAVDAQHGGIPPRPDAAPPENDGGAGYGKTKLACQRKASDARDVWGKGAEKPNKFIADVLSEIGVGFRFANWVGIKVALLFGRGDRRVGRWRSYSAAATVVSGFKRPLKTAEDLRGVRGLGAKMVQNIAEIIETGDLELKHALLAQLKPTKDLCGXXXXXXXXXVWGLGPMTAKKLIEMGITSIPELRRRAAEDRAKSLLTHQQAIGLRYYEELQQRMQRDEATAIVGVVSAAVQKLCPGAGCIAMGSYRRGKETCGDVDVLVVPPSGQEVCEWIMQPLLALLHDQNFLTDDLAGGPTEATQNFGHFKHRSRGTAPEESVNPLSKHVMSYMGVCQLSPTHSHRRIDIKVYPRSLSAFAMLYFTGSDYFNRSMRFHAIKMGRCLSDKGLYPVTRGSKGEILWRGNLCKXXXXXXXXXXXXXXXXXKSIACMEEKDVFDALGLEYRAPHERSIDESTASAMLEAAEDEEGPGDGPAN 848
            MIAPRAAALGQPPFADRAILAKQLRFRAVARKYAELLEAALQDIEAAEREEQEADRDRRRRLKCPQHAAHEITSQEVQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAPLQPSADIGASVIDGGAGAGEAVEGQAAAAKSATRSQRPAAPPPTAVSLLASMAEAAGGGRQAGSGKRGDVHRAAVAGTPQLQASAEAPAQRNGKRARVAKGKKAGGGKEGGYLSGLCIYVVRLGSVTRRIRDMLLNRVLDAGGAVTDTYDAAATTHVVADASVPRDAILAHAGWGAHAERDSVVVASLAWLQGCLAERALLPLRTDIICGPGAYVLPSQXXXXXXXXXXLTENIICSPGAYVPPEPXXXXXXXXXXXARAMAAVDAQHGGIPPRPDAAPPENDGGAGYGKTKLACQRKASDARDVWGKGAEKPNKFIADVLSEIGVGFRFANWVGIKVALLFGRGDRRVGRWRSYSAAATVVSGFKRPLKTAEDLRGVRGLGAKMVQNIAEIIETGDLELKHALLAQLKPTKDLCGXXXXXXXXXVWGLGPMTAKKLIEMGITSIPELRRRAAEDRAKSLLTHQQAIGLRYYEELQQRMQRDEATAIVGVVSAAVQKLCPGAGCIAMGSYRRGKETCGDVDVLVVPPSGQEVCEWIMQPLLALLHDQNFLTDDLAGGPTEATQNFGHFKHRSRGTAPEESVNPLSKHVMSYMGVCQLSPTHSHRRIDIKVYPRSLSAFAMLYFTGSDYFNRSMRFHAIKMGRCLSDKGLYPVTRGSKGEILWRGNLCKXXXXXXXXXXXXXXXXXKSIACMEEKDVFDALGLEYRAPHERSIDESTASAMLEAAEDEEGPGDGPAN
Sbjct:    1 MIAPRAAALGQPPFADRAILAKQLRFRAVARKYAELLEAALQDIEAAEREEQEADRDRRRRLKCPQHAAHEITSQEVQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAPLQPSADIGASVIDGGAGAGEAVEGQAAAAKSATRSQRPAAPPPTAVSLLASMAEAAGGGRQAGSGKRGDVHRAAVAGTPQLQASAEAPAQRNGKRARVAKGKKAGGGKEGGYLSGLCIYVVRLGSVTRRIRDMLLNRVLDAGGAVTDTYDAAATTHVVADASVPRDAILAHAGWGAHAERDSVVVASLAWLQGCLAERALLPLRTDIICGPGAYVLPSQXXXXXXXXXXLTENIICSPGAYVPPEPXXXXXXXXXXXARAMAAVDAQHGGIPPRPDAAPPENDGGAGYGKTKLACQRKASDARDVWGKGAEKPNKFIADVLSEIGVGFRFANWVGIKVALLFGRGDRRVGRWRSYSAAATVVSGFKRPLKTAEDLRGVRGLGAKMVQNIAEIIETGDLELKHALLAQLKPTKDLCGXXXXXXXXXVWGLGPMTAKKLIEMGITSIPELRRRAAEDRAKSLLTHQQAIGLRYYEELQQRMQRDEATAIVGVVSAAVQKLCPGAGCIAMGSYRRGKETCGDVDVLVVPPSGQEVCEWIMQPLLALLHDQNFLTDDLAGGPTEATQNFGHFKHRSRGTAPEESVNPLSKHVMSYMGVCQLSPTHSHRRIDIKVYPRSLSAFAMLYFTGSDYFNRSMRFHAIKMGRCLSDKGLYPVTRGSKGEILWRGNLCKXXXXXXXXXXXXXXXXXKSIACMEEKDVFDALGLEYRAPHERSIDESTASAMLEAAEDEEGPGDGPAN 848          
BLAST of jgi.p|Trimin1|354458 vs. uniprot
Match: G0QLY3_ICHMG (DNA polymerase (Fragment) n=1 Tax=Ichthyophthirius multifiliis (strain G5) TaxID=857967 RepID=G0QLY3_ICHMG)

HSP 1 Score: 197 bits (502), Expect = 3.580e-53
Identity = 135/372 (36.29%), Postives = 190/372 (51.08%), Query Frame = 0
Query:  458 DRRVGRWRSYSAAATVVSGFKRPLKTAEDLRGVRGLGAKMVQNIAEIIETGDLELKHALLAQLKPTKDLCGXXXXXXXXXVWGLGPMTAKKLIEMGITSIPELRRRAAEDRAKSLLTHQQAIGLRYYEELQQRMQRDEATAIVGVVSAAVQKLCPGA----GCIAMGSYRRGKETCGDVDVLVVPPSGQEVCEW-IMQPLLALLHDQNFLTDDLAGGPTEATQNFGHFKHRSRGTAPEESVNPLSKHVMSYMGVCQLSPTHSHRRIDIKVYPRSLSAFAMLYFTGSDYFNRSMRFHAIKMGRCLSDKGLYPVTRGSKGEILWRGNLCKXXXXXXXXXXXXXXXXXKSIACMEEKDVFDALGLEYRAPHERSI 824
            ++ +GR  +Y  A +++ G K+ +++ ED++ ++G+G K+   I EI++ G  E    L+   K                VWG+G  TA  L + GI +I +L++       + LL   Q IGL+YY+EL +RM R+EAT I+  V   ++ L P        IA GSYRR KETCGDVD+L+     ++     +M  ++  LH    LTDDLA                     P+ S     + V +YMGVCQLS    HRRIDIK YP  +  FA++YFTGSDYFNRSMR  A K G  LSD GL+PV R      +  G                     ++I C  EKDVFDAL L+Y+ P  R++
Sbjct:   12 EKDLGRTIAYRRAISILQGHKQQIQSKEDIKKIKGIGDKIKLKIQEILQNGTCEKIQNLINDEKNIS-------INILSKVWGIGTNTAHILYKKGIKTIEQLKQN------QHLLNKNQKIGLKYYDELNKRMHREEATKIIQKVQEQIKILYPKQYDKYNIIACGSYRREKETCGDVDILICRNDFEQYKHKNLMITIIQQLHKCGLLTDDLA--------------------LPKNS----RQGVENYMGVCQLSSDQLHRRIDIKYYPNFIYGFALIYFTGSDYFNRSMRLFARKKGFSLSDNGLFPVQRCPNKVKVVSG---------------------ETICCYTEKDVFDALHLKYQEPKMRNL 325          
BLAST of jgi.p|Trimin1|354458 vs. uniprot
Match: A0A7S2HHH8_9STRA (DNA polymerase n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2HHH8_9STRA)

HSP 1 Score: 186 bits (472), Expect = 1.700e-49
Identity = 129/332 (38.86%), Postives = 174/332 (52.41%), Query Frame = 0
Query:  501 IAEIIETGDLELKHALLAQLKPTKDLCGXXXXXXXXXVWGLGPMTAKKLIEM-GITSIPELRRRAAEDRAKSLLTHQQAIGLRYYEELQQRMQRDEATAIVGVVSAAVQKLCPGAGCIAMGSYRRGKETCGDVDVLVVPP---SGQ--EVCEWIMQPLLA----LLHDQNFLTDDLAGGPTEATQNFGHFKHRSRGTAPEESVNPLSKHVMSYMGVCQLSPTHSHRRIDIKVYPRSLSAFAMLYFTGSDYFNRSMRFHAIKMGRCLSDKGLYPVTRGSKGEILWRGNLCKXXXXXXXXXXXXXXXXXKSIACMEEKDVFDALGLEYRAPHER 822
            + ++IETG +        +L+  ++  G         VWG+GP+TA  + +  G+ ++ +LR   A    K  L+  Q IGLR   EL++RM R EATAI  +V+   + L PG   +  GSYRRGK++ GDVDVL+ PP   +GQ  E  E  MQ LL      LH  NFLTDDL       T  +  FK  S G  P +  +       +YMGVC+L   H HRR+DIKVYPR + AFA +YFTGSDYFNRSMR  A + G  LSDKGL    R   G                            S+ C  EK++F+ +G++++ PHER
Sbjct:    1 LTDLIETGSM-------MELEVVRERAGQTACEELTQVWGIGPVTAWSMQQKHGVKTLGDLRSAVAA--GKINLSSCQRIGLRLVRELKERMPRSEATAIGAMVTKEARSLVPGCFAMVCGSYRRGKQSSGDVDVLLGPPPSATGQDSEADEAAMQSLLPNLLQQLHTSNFLTDDL-------TLPYTPFK--SSGRYPSDGNSAEGSLPQTYMGVCKLGADHLHRRLDIKVYPREMIAFAQMYFTGSDYFNRSMRCLARRQGWSLSDKGL--KKRFGAG----------------------------SVTCHSEKEIFEVMGMDWKEPHER 284          
BLAST of jgi.p|Trimin1|354458 vs. uniprot
Match: A0A0P1AR42_PLAHL (DNA-directed DNA polymerase n=1 Tax=Plasmopara halstedii TaxID=4781 RepID=A0A0P1AR42_PLAHL)

HSP 1 Score: 196 bits (498), Expect = 5.060e-48
Identity = 135/366 (36.89%), Postives = 186/366 (50.82%), Query Frame = 0
Query:  458 DRRVGRWRSYSAAATVVSGFKRPLKTAEDLRGVRGLGAKMVQNIAEIIETGDLELKHALLAQLKPTKDLCGXXXXXXXXXVWGLGPMTAKKLIEMGITSIPELRRRAAEDRAKSLLTHQQAIGLRYYEELQQRMQRDEATAIVGVVSAAVQKLCPGAGCIAMGSYRRGKETCGDVDVLVVPPSGQEVCEWIMQPLLALLHDQNFLTDDLAGGPTEATQNFGHFKHRSRGTAPEESVNPLSKHVMSYMGVCQLSPTHSHRRIDIKVYPRSLSAFAMLYFTGSDYFNRSMRFHAIKMGRCLSDKGLYPVTRGSKGEILWRGNLCKXXXXXXXXXXXXXXXXXKSIACMEEKDVFDALGLEYRAPHERS 823
            +R V R   Y    + +   +  + T +D++ +R +  ++   I EI+ETG L    + L   K    LC          VWG+GP+TA KL   G  S+ +LR+ AA +    +LT QQ IG+++YE++  ++ R E   I  +VS  V K+ P A  +A GSYRRGK + GD D+LV  P   + C+ I+  LL  LH   FLTDDL            HF+ +  G               +YMGVC+LS    HRR+DIKVYPR    FA+LYFTGSD+FNRSMR +A K G  LSD+ L  V R +  ++                          S+ C  E DVF ALGLEY+ P ER+
Sbjct:  725 ERDVWRQYMYKKVVSSLKATRHRVCTVKDIKDMRWVKGRLRDKIIEILETGRL----SKLDVKKSNPRLCALVEIAR---VWGVGPVTAAKLYGQGYKSVADLRKPAAAE----VLTAQQQIGVKHYEDILLKIPRAEVHQIEQIVSDEVHKMIPNAIAVACGSYRRGKLSSGDCDILVTDPDA-DTCD-ILPDLLKRLHASGFLTDDLT-----------HFQKQKNGGCD------------TYMGVCRLSKNLPHRRLDIKVYPRLFFGFAILYFTGSDHFNRSMRLYANKNGWSLSDRALTRVVRVNTTKV----------------------RLGDSVVCESEVDVFIALGLEYKDPTERN 1032          
BLAST of jgi.p|Trimin1|354458 vs. uniprot
Match: A0A8K1C261_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1C261_PYTOL)

HSP 1 Score: 194 bits (494), Expect = 1.350e-47
Identity = 138/363 (38.02%), Postives = 177/363 (48.76%), Query Frame = 0
Query:  464 WRSYSAAATVVSGFKRP---LKTAEDLRGVRGLGAKMVQNIAEIIETGDLELKHALLAQLKPTKDLCGXXXXXXXXXVWGLGPMTAKKLIEMGITSIPELRRRAAEDRAKSLLTHQQAIGLRYYEELQQRMQRDEATAIVGVVSAAVQKLCPGAGCIAMGSYRRGKETCGDVDVLVVPPSGQEVCEWIMQPLLALLHDQNFLTDDLAGGPTEATQNFGHFKHRSRGTAPEESVNPLSKHVMSYMGVCQLSPTHSHRRIDIKVYPRSLSAFAMLYFTGSDYFNRSMRFHAIKMGRCLSDKGLYPVTRGSKGEILWRGNLCKXXXXXXXXXXXXXXXXXKSIACMEEKDVFDALGLEYRAPHERS 823
            WR YS    VVS  K     + +  D++G+     +M   + EI+ETG LE       +L+  K             +WG+GP TA KL  MG  ++ +LR+ A +     +L  QQ IGL YY++   ++ R E T I   V   V +L P A  +A GSYRRGK + GD DVL+  P  +E C+ I+  LL  LH   FLTDDL            H      G               SYMGVCQL     HRR+DIKVYPR    FA+LYFTGSD+FNRSMR +A K G  LSD+ L  V R  K   +  G                     +S+ C  E DVF ALGLEY+ P ER+
Sbjct:  822 WREYSYKK-VVSSLKAMCSRVSSVSDIKGLWWAKGRMRDKVVEILETGKLE-------KLEAKKINPRLRTLVEMSRIWGVGPATAAKLYNMGYKTMDQLRKDADK-----VLNFQQQIGLNYYQDFLTKIPRSEVTEIEKTVVDEVHRLLPNATALACGSYRRGKPSSGDCDVLITDPDSEE-CD-ILPTLLERLHAMGFLTDDLT-----------HVSDHRMGRCD------------SYMGVCQLRKDLPHRRLDIKVYPRRCFGFALLYFTGSDHFNRSMRLYARKKGWSLSDRALKRVVRVRKDVKIESG---------------------ESVVCQSEVDVFIALGLEYKDPTERN 1125          
BLAST of jgi.p|Trimin1|354458 vs. uniprot
Match: F0WG97_9STRA (DNA polymerase n=1 Tax=Albugo laibachii Nc14 TaxID=890382 RepID=F0WG97_9STRA)

HSP 1 Score: 189 bits (481), Expect = 1.620e-47
Identity = 128/363 (35.26%), Postives = 185/363 (50.96%), Query Frame = 0
Query:  463 RWR--SYSAAATVVSGFKRPLKTAEDLRGVRGLGAKMVQNIAEIIETGDLELKHALLAQLKPTKDLCGXXXXXXXXXVWGLGPMTAKKLIEMGITSIPELRRRAAEDRAKSLLTHQQAIGLRYYEELQQRMQRDEATAIVGVVSAAVQKLCPGAGCIAMGSYRRGKETCGDVDVLVVPPSGQEVCEWIMQPLLALLHDQNFLTDDLAGGPTEATQNFGHFKHRSRGTAPEESVNPLSKHVMSYMGVCQLSPTHSHRRIDIKVYPRSLSAFAMLYFTGSDYFNRSMRFHAIKMGRCLSDKGLYPVTRGSKGEILWRGNLCKXXXXXXXXXXXXXXXXXKSIACMEEKDVFDALGLEYRAPHERS 823
            +WR  SY      +   +  L T +D++G+     +M   +AE++ETG +E       +L+  +             +WG+GP TA KL ++G  ++ +L     E+   S+L+ QQ IGLR+Y++  +++ R+E   I  +V   V ++ P A  +A GSYRRGKE  GD D+L+  P  +E    ++  LL  L  +NF+TDDL       TQ   H   R                  SYMGVC+++    HRR+DIKVYPR    FA+LYFTGSD+FNRSMR +A K G  LSD+ L PV R S G  +  G+  K                     C  E ++F ALGLEY+ P ER+
Sbjct:  297 QWRVNSYKKVVGSLKVMQVRLSTVKDIQGLWWAKGRMYSRVAELLETGRME-------KLEAKRRNPRLQTMLSFARIWGVGPTTAIKLYDLGFRTLADL-----EEAGSSVLSQQQRIGLRHYDDFLKKIPREEVKQIESIVVDEVHQILPRANAMACGSYRRGKEISGDCDILITDPDEEEC--GLLPELLVRLRHKNFITDDL-------TQVSDHHMGRCD----------------SYMGVCRVNEHLPHRRLDIKVYPRRFYPFALLYFTGSDHFNRSMRLYAKKRGYSLSDRFLKPVMRAS-GHQIDIGDFVK---------------------CTNEAEIFIALGLEYKDPLERN 600          
BLAST of jgi.p|Trimin1|354458 vs. uniprot
Match: UPI0003339928 (DNA polymerase lambda n=1 Tax=Echinops telfairi TaxID=9371 RepID=UPI0003339928)

HSP 1 Score: 188 bits (478), Expect = 1.970e-47
Identity = 135/368 (36.68%), Postives = 183/368 (49.73%), Query Frame = 0
Query:  463 RWRS--YSAAATVVSGFKRPLKTAEDLRGVRGLGAKMVQNIAEIIETGDL-ELKHALLAQLKPTKDLCGXXXXXXXXXVWGLGPMTAKKLIEMGITSIPELRRRAAEDRAKSLLTHQQAIGLRYYEELQQRMQRDEATAIVGVVSAAVQKLCPGAGCIAMGSYRRGKETCGDVDVLVVPPSGQEVCEWIMQPLLALLHD----QNFLTDDLAGGPTEATQNFGHFKHRSRGTAPEESVNPLSKHVMSYMGVCQL-SPTHSHRRIDIKVYPRSLSAFAMLYFTGSDYFNRSMRFHAIKMGRCLSDKGLYPVTRGSKGEILWRGNLCKXXXXXXXXXXXXXXXXXKSIACMEEKDVFDALGLEYRAPHER 822
            +WR+  YS A   +  F +P+ + ++  G+ G+G +M + IAEI+E+G L +L H  +++  P  +L           +WG G  TA+     G  ++ ++R +A+       L+ QQAIGL++YE+  +RM R+EA  I  +V  + Q L PG  C+A GSYRRGK TCGDVDVLV  P G     W  Q + +LL D    Q FLTDDL     +  Q                           Y+GVC+L  P   HRR+DI V P S  A A+LYFTGS +FNRSMR  A   G  LS+  L  V R ++G  L  G L                     +    EKDVF  LGL YR P ER
Sbjct:  275 KWRALGYSKAINALKSFHKPVTSFQEACGIPGIGRRMAEKIAEILESGHLRKLDH--ISESVPVLELFSH--------IWGAGTKTAQMWYHQGFRNLDDIRSQAS-------LSSQQAIGLKHYEDFLERMPREEAAEIQQMVQESAQALNPGLLCVACGSYRRGKATCGDVDVLVTHPDG-----WSHQGIFSLLLDSLRRQGFLTDDLVSQEEKGQQ-------------------------QKYLGVCRLPGPARRHRRLDIIVVPYSEFACALLYFTGSAHFNRSMRALAKTKGMSLSEHALSMVVRDAQGLKLGPGRL---------------------LPTPTEKDVFKLLGLPYREPAER 574          
BLAST of jgi.p|Trimin1|354458 vs. uniprot
Match: W4GGX8_9STRA (DNA polymerase n=2 Tax=Aphanomyces astaci TaxID=112090 RepID=W4GGX8_9STRA)

HSP 1 Score: 189 bits (479), Expect = 4.170e-47
Identity = 134/362 (37.02%), Postives = 175/362 (48.34%), Query Frame = 0
Query:  464 WR--SYSAAATVVSGFKRPLKTAEDLRGVRGLGAKMVQNIAEIIETGDLELKHALLAQLKPTKDLCGXXXXXXXXXVWGLGPMTAKKLIEMGITSIPELRRRAAEDRAKSLLTHQQAIGLRYYEELQQRMQRDEATAIVGVVSAAVQKLCPGAGCIAMGSYRRGKETCGDVDVLVVPPSGQEVCEWIMQPLLALLHDQNFLTDDLAGGPTEATQNFGHFKHRSRGTAPEESVNPLSKHVMSYMGVCQLSPTHSHRRIDIKVYPRSLSAFAMLYFTGSDYFNRSMRFHAIKMGRCLSDKGLYPVTRGSKGEILWRGNLCKXXXXXXXXXXXXXXXXXKSIACMEEKDVFDALGLEYRAPHERS 823
            WR  SY    +++      + +A  L+   GL +  +  I EI+ETG L        +L+  +             +WG+GP TA  L   G  ++ +LR +  E     +LTH Q IGL++Y++   ++ R E   I  VV   V  L P A  I  GSYRRGK   GDVDVL+  P+ Q+ C  IM  LLA LH   FLTDDL                    T  E  +        SYMGVC+L     +RRIDIKVYPR+L  FA LYFTGSD+FNRSMR  A   G  L+DKGLY  TR    + L +G                      ++ C +EKDVF AL L Y+ P ER+
Sbjct:  338 WRENSYKRICSILKQLPNRVTSAHSLQPQHGLNSTGIAKIREILETGTLR-------KLEAKRSDPRLQVLLQFSNIWGVGPATATNLYRAGYRTLDDLRAKQDE-----VLTHNQRIGLKHYDDFLAKIPRSEVQEIESVVKQHVHSLLPRAVAITCGSYRRGKSQSGDVDVLISDPT-QDDCN-IMPRLLADLHAIGFLTDDLT-------------------TVEEHKIGGSD----SYMGVCRLGEGRRYRRIDIKVYPRNLFGFAQLYFTGSDHFNRSMRAFAKMKGYSLTDKGLYKATRSKGVKKLKQG---------------------PNVICRDEKDVFLALQLPYKRPDERN 641          
BLAST of jgi.p|Trimin1|354458 vs. uniprot
Match: A0A2D4CGN1_PYTIN (DNA-directed DNA polymerase (Fragment) n=2 Tax=Pythium insidiosum TaxID=114742 RepID=A0A2D4CGN1_PYTIN)

HSP 1 Score: 190 bits (482), Expect = 4.180e-46
Identity = 139/392 (35.46%), Postives = 189/392 (48.21%), Query Frame = 0
Query:  458 DRRVGRWRSYSAAATVVSGFKRPLKTAEDLRGVRGLGAKMVQNIAEIIETGDLELKHALLAQLKPTKDLCGXXXXXXXXXVWGLGPMTAKKLIEMGITSIPELRRRAAEDRAKSLLTHQQAIGLRYYEELQQRMQRDEATAIVGVVSAAVQKLCPGAGCIAMGSYRRGKETCGDVDVLVVPPSGQEVCEWIMQPLLALLHDQNFLTDDLAGGPTEATQNFGHFKHRSRGTAPEESVNPLSKHVMSYMGVCQLSPTHSHRRIDIKVYPRSLSAFAMLYFTGSDYFNRSMRFHAIKMGRCLSDKGLYPVTRGSKGEILWRGNLCKXXXXXXXXXXXXXXXXXKSIACMEEKDVFDALGLEYRAPHERS------IDESTASAM---LEAAEDEE 840
            +R + R  SY    + +   +  +    DL+G+     +M   + EI+ETG LE       +L+  K             +WG+GP TA KL  MG  S+  L   A     +S+L  QQ IGLRYY++   ++ R E   I   V   V +L P A  +A GSYRRGK + GD D+L+  P+ +E C+ I+  LL  LH   F+TDDL         +  +  H  R                +YMGVCQL     HRR+DIKVYPR    FA+LYFTGSD+FNRSMR  A K G  LSD+ L  V R  KG  +  G                     +++ C  E DV  ALG+EY+ P ER+      +DE  A+A      AA+D+E
Sbjct:  536 ERDIWREYSYKKVVSSLKAMRTRVSRVRDLKGLWWAKGRMRDKVVEILETGKLE-------KLEAKKINPRLQTLVQMAKIWGVGPATAAKLYNMGYKSMEALYANA-----ESVLNFQQQIGLRYYDDFLTKIPRAEVQEIEKTVVDEVHRLLPQATALACGSYRRGKASSGDCDILITDPNSEE-CD-ILPELLRRLHATGFMTDDLT--------HISNEHHMGRCD--------------TYMGVCQLRQDLPHRRLDIKVYPRRCFGFALLYFTGSDHFNRSMRLFARKKGWSLSDRALKRVVRVRKGTKVEAG---------------------EAVVCESEVDVLIALGMEYKDPTERNCFEIRFLDEDEANAKKGKTAAAQDDE 870          
BLAST of jgi.p|Trimin1|354458 vs. uniprot
Match: G3W992_SARHA (DNA polymerase n=1 Tax=Sarcophilus harrisii TaxID=9305 RepID=G3W992_SARHA)

HSP 1 Score: 184 bits (468), Expect = 5.330e-46
Identity = 134/365 (36.71%), Postives = 179/365 (49.04%), Query Frame = 0
Query:  463 RWRS--YSAAATVVSGFKRPLKTAEDLRGVRGLGAKMVQNIAEIIETGDL-ELKHALLAQLKPTKDLCGXXXXXXXXXVWGLGPMTAKKLIEMGITSIPELRRRAAEDRAKSLLTHQQAIGLRYYEELQQRMQRDEATAIVGVVSAAVQKLCPGAGCIAMGSYRRGKETCGDVDVLVVPPSGQEVCEWIMQPLLALLHDQNFLTDDLAGGPTEATQNFGHFKHRSRGTAPEESVNPLSKHVMSYMGVCQL-SPTHSHRRIDIKVYPRSLSAFAMLYFTGSDYFNRSMRFHAIKMGRCLSDKGLYP-VTRGSKGEILWRGNLCKXXXXXXXXXXXXXXXXXKSIACMEEKDVFDALGLEYRAPHER 822
            RWRS  YS A   +  F +P+ + ++  G+ G+G +M + I EI+E+G L +L H  ++   P  +L           +WG+G  TA+   + G  ++ ++  RA        LT QQAIGL++YE+  +R+ R+EA+ I   V  A   L PG   +A GSYRRGK TCGDVDVLV  P G+   + I   LL  L  Q FLTDDL        Q                           Y+GVC+L  P   HRR+DI V P S  A A+LYFTGS YFNRSMR  A   G  LS++ LY  V R  +G  +  G                     +++    EKDVF  LGL YR P ER
Sbjct:  288 RWRSLSYSKAINALKSFHKPVSSYQEACGIPGIGKRMAEKIMEIVESGHLRKLDH--ISDSVPVLELFSN--------IWGVGSKTAQMWYQQGFRTLEDIESRAT-------LTSQQAIGLKHYEDFLKRIPREEASEIEQTVREAAHALNPGLLSVACGSYRRGKATCGDVDVLVTHPDGRSH-QGIFGQLLDTLRQQGFLTDDLVSQDDNGQQ-------------------------QKYLGVCRLPGPGRLHRRLDIIVVPYSEFACALLYFTGSAYFNRSMRALAKTKGMSLSERSLYTAVVRDGRGLKVGPG---------------------RALPTPTEKDVFRLLGLPYREPSER 588          
The following BLAST results are available for this feature:
BLAST of jgi.p|Trimin1|354458 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A835YYU5_9STRA0.000e+0100.00DNA polymerase beta n=1 Tax=Tribonema minus TaxID=... [more]
G0QLY3_ICHMG3.580e-5336.29DNA polymerase (Fragment) n=1 Tax=Ichthyophthirius... [more]
A0A7S2HHH8_9STRA1.700e-4938.86DNA polymerase n=1 Tax=Dictyocha speculum TaxID=35... [more]
A0A0P1AR42_PLAHL5.060e-4836.89DNA-directed DNA polymerase n=1 Tax=Plasmopara hal... [more]
A0A8K1C261_PYTOL1.350e-4738.02Uncharacterized protein n=1 Tax=Pythium oligandrum... [more]
F0WG97_9STRA1.620e-4735.26DNA polymerase n=1 Tax=Albugo laibachii Nc14 TaxID... [more]
UPI00033399281.970e-4736.68DNA polymerase lambda n=1 Tax=Echinops telfairi Ta... [more]
W4GGX8_9STRA4.170e-4737.02DNA polymerase n=2 Tax=Aphanomyces astaci TaxID=11... [more]
A0A2D4CGN1_PYTIN4.180e-4635.46DNA-directed DNA polymerase (Fragment) n=2 Tax=Pyt... [more]
G3W992_SARHA5.330e-4636.71DNA polymerase n=1 Tax=Sarcophilus harrisii TaxID=... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 30..57
NoneNo IPR availableGENE3D1.10.150.20coord: 528..590
e-value: 5.7E-16
score: 60.1
NoneNo IPR availablePIRSRPIRSR000817-1PIRSR000817-1coord: 465..822
e-value: 3.0E-35
score: 119.6
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 42..67
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 380..401
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 41..110
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 823..848
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 139..214
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 71..93
NoneNo IPR availableSUPERFAMILY81585PsbU/PolX domain-likecoord: 530..588
IPR002008DNA polymerase family X, beta-likePRINTSPR00870DNAPOLXBETAcoord: 805..822
score: 48.89
coord: 492..509
score: 38.89
coord: 618..637
score: 51.0
coord: 716..724
score: 55.56
coord: 731..738
score: 70.0
IPR022312DNA polymerase family XPRINTSPR00869DNAPOLXcoord: 717..726
score: 36.15
coord: 631..639
score: 51.28
coord: 617..631
score: 45.64
coord: 540..557
score: 36.75
coord: 733..746
score: 51.1
IPR022312DNA polymerase family XPANTHERPTHR11276DNA POLYMERASE TYPE-X FAMILY MEMBERcoord: 58..822
IPR002054DNA-directed DNA polymerase XSMARTSM00483polxneu3coord: 442..823
e-value: 2.2E-43
score: 160.1
IPR002054DNA-directed DNA polymerase XCDDcd00141NT_POLXccoord: 427..822
e-value: 4.57188E-82
score: 264.057
IPR003583Helix-hairpin-helix DNA-binding motif, class 1SMARTSM00278HhH1_4coord: 485..504
e-value: 4.2
score: 16.3
coord: 533..552
e-value: 160.0
score: 9.7
IPR027421DNA polymerase lambda lyase domain superfamilyGENE3D1.10.150.110coord: 419..516
e-value: 6.5E-11
score: 44.2
IPR027421DNA polymerase lambda lyase domain superfamilySUPERFAMILY47802DNA polymerase beta, N-terminal domain-likecoord: 461..511
IPR028207DNA polymerase beta, palm domainPFAMPF14792DNA_pol_B_palmcoord: 590..724
e-value: 1.7E-23
score: 83.0
IPR018944DNA polymerase lambda, fingers domainPFAMPF10391DNA_pol_lambd_fcoord: 535..588
e-value: 5.2E-14
score: 51.8
IPR036420BRCT domain superfamilyGENE3D3.40.50.10190BRCT domaincoord: 218..317
e-value: 2.0E-6
score: 29.5
IPR036420BRCT domain superfamilySUPERFAMILY52113BRCT domaincoord: 224..315
IPR037160DNA polymerase, thumb domain superfamilyGENE3D3.30.210.10DNA polymerase, thumb domaincoord: 734..823
e-value: 1.9E-21
score: 77.8
IPR043519Nucleotidyltransferase superfamilyGENE3D3.30.460.10Beta Polymerase, domain 2coord: 591..733
e-value: 4.1E-31
score: 109.5
IPR043519Nucleotidyltransferase superfamilySUPERFAMILY81301Nucleotidyltransferasecoord: 590..823
IPR029398DNA polymerase beta, thumb domainPFAMPF14791DNA_pol_B_thumbcoord: 731..822
e-value: 1.6E-17
score: 63.3
IPR019843DNA polymerase family X, binding sitePROSITEPS00522DNA_POLYMERASE_Xcoord: 620..639
IPR001357BRCT domainPROSITEPS50172BRCTcoord: 220..320
score: 12.42154

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Contig_251contigContig_251:31370..47417 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Tribonema minus UTEX_B_31562021-06-17
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
jgi.p|Trimin1|354458mRNA_18614Tribonema minus UTEX_B_3156 mRNAContig_251 31370..47417 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Trimin1|354458|estExt_Genemark1.C_Ctg_2510002 ID=Trimin1|354458|estExt_Genemark1.C_Ctg_2510002|Name=jgi.p|Trimin1|354458|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=849bp
MIAPRAAALGQPPFADRAILAKQLRFRAVARKYAELLEAALQDIEAAERE
EQEADRDRRRRLKCPQHAAHEITSQEVQQQQQQSGVADHQQQTSQPPPPD
PALAGAAAAAAPLQPSADIGASVIDGGAGAGEAVEGQAAAAKSATRSQRP
AAPPPTAVSLLASMAEAAGGGRQAGSGKRGDVHRAAVAGTPQLQASAEAP
AQRNGKRARVAKGKKAGGGKEGGYLSGLCIYVVRLGSVTRRIRDMLLNRV
LDAGGAVTDTYDAAATTHVVADASVPRDAILAHAGWGAHAERDSVVVASL
AWLQGCLAERALLPLRTDIICGPGAYVLPSQCLAERALLPLLTENIICSP
GAYVPPEPEPAPAAAAEAVARAMAAVDAQHGGIPPRPDAAPPENDGGAGY
GKTKLACQRKASDARDVWGKGAEKPNKFIADVLSEIGVGFRFANWVGIKV
ALLFGRGDRRVGRWRSYSAAATVVSGFKRPLKTAEDLRGVRGLGAKMVQN
IAEIIETGDLELKHALLAQLKPTKDLCGLKPMKDLCGVWGLGPMTAKKLI
EMGITSIPELRRRAAEDRAKSLLTHQQAIGLRYYEELQQRMQRDEATAIV
GVVSAAVQKLCPGAGCIAMGSYRRGKETCGDVDVLVVPPSGQEVCEWIMQ
PLLALLHDQNFLTDDLAGGPTEATQNFGHFKHRSRGTAPEESVNPLSKHV
MSYMGVCQLSPTHSHRRIDIKVYPRSLSAFAMLYFTGSDYFNRSMRFHAI
KMGRCLSDKGLYPVTRGSKGEILWRGNLCKGLYPVTSGSKGEILWRGKSI
ACMEEKDVFDALGLEYRAPHERSIDESTASAMLEAAEDEEGPGDGPAN*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR002008DNA_pol_X_beta-like
IPR022312DNA_pol_X
IPR002054DNA-dir_DNA_pol_X
IPR003583Hlx-hairpin-Hlx_DNA-bd_motif
IPR027421DNA_pol_lamdba_lyase_dom_sf
IPR028207DNA_pol_B_palm_palm
IPR018944DNA_pol_lambd_fingers_domain
IPR036420BRCT_dom_sf
IPR037160DNA_Pol_thumb_sf
IPR043519NT_sf
IPR029398PolB_thumb
IPR019843DNA_pol-X_BS
IPR001357BRCT_dom