Trimin1|354442|estExt_Genemark1.C_Ctg_2470013 (polypeptide) Tribonema minus UTEX_B_3156

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
Namejgi.p|Trimin1|354442
Unique NameTrimin1|354442|estExt_Genemark1.C_Ctg_2470013
Typepolypeptide
OrganismTribonema minus UTEX_B_3156 (Tribonema minus UTEX_B_3156 )
Sequence length199
Homology
BLAST of jgi.p|Trimin1|354442 vs. uniprot
Match: A0A836CG07_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CG07_9STRA)

HSP 1 Score: 416 bits (1069), Expect = 2.130e-147
Identity = 198/198 (100.00%), Postives = 198/198 (100.00%), Query Frame = 0
Query:    1 MFVNFMHGRDDCEGIEVIKGVKLGGLPDALALVAQGKADPSEFKFFVRFCGWGPGQLAREVKLGAWYAAACDVGTVLDQYTDESQPAALWTEVLARMGGKYKTLAEKWGGADDLDSSYFNSYLNGNSGVPFLCALLRWGPGQLARKVKLGAWSAAACDMGTVLNQYTDESQPAALWTEVLARMGGKYKALAEMWGGHR 198
            MFVNFMHGRDDCEGIEVIKGVKLGGLPDALALVAQGKADPSEFKFFVRFCGWGPGQLAREVKLGAWYAAACDVGTVLDQYTDESQPAALWTEVLARMGGKYKTLAEKWGGADDLDSSYFNSYLNGNSGVPFLCALLRWGPGQLARKVKLGAWSAAACDMGTVLNQYTDESQPAALWTEVLARMGGKYKALAEMWGGHR
Sbjct:    1 MFVNFMHGRDDCEGIEVIKGVKLGGLPDALALVAQGKADPSEFKFFVRFCGWGPGQLAREVKLGAWYAAACDVGTVLDQYTDESQPAALWTEVLARMGGKYKTLAEKWGGADDLDSSYFNSYLNGNSGVPFLCALLRWGPGQLARKVKLGAWSAAACDMGTVLNQYTDESQPAALWTEVLARMGGKYKALAEMWGGHR 198          
BLAST of jgi.p|Trimin1|354442 vs. uniprot
Match: A0A835ZEY4_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZEY4_9STRA)

HSP 1 Score: 345 bits (884), Expect = 8.170e-117
Identity = 174/196 (88.78%), Postives = 177/196 (90.31%), Query Frame = 0
Query:    3 VNFMHGRDDCEGIEVIKGVKLGGLPDALALVAQGKADPSEFKFFVRFCGWGPGQLAREVKLGAWYAAACDVGTVLDQYTDESQPAALWTEVLARMGGKYKTLAEKWGGADDLDSSYFNSYLNGNSGVPFLCALLRWGPGQLARKVKLGAWSAAACDMGTVLNQYTDESQPAALWTEVLARMGGKYKALAEMWGGHR 198
            VNFMHGRDDCEGIEVIKGVKLGGLPDALALVAQGKADPSEFKFFVRFCGWGPGQLAREVKLGAWYAAACDVGTVLDQYTDESQPAALWTEVLARMGGKYKTLAE       L + +    + G   V  LCALLRWGPGQLARKVKLGAWSAAACDMGTVLNQYTDESQPAALWTEVLARMGGKYKALAEMWGGHR
Sbjct:  168 VNFMHGRDDCEGIEVIKGVKLGGLPDALALVAQGKADPSEFKFFVRFCGWGPGQLAREVKLGAWYAAACDVGTVLDQYTDESQPAALWTEVLARMGGKYKTLAEN----GRLGARHNAVGVWGWLSV--LCALLRWGPGQLARKVKLGAWSAAACDMGTVLNQYTDESQPAALWTEVLARMGGKYKALAEMWGGHR 357          
BLAST of jgi.p|Trimin1|354442 vs. uniprot
Match: A0A836CDX0_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CDX0_9STRA)

HSP 1 Score: 325 bits (834), Expect = 1.700e-111
Identity = 168/196 (85.71%), Postives = 168/196 (85.71%), Query Frame = 0
Query:    3 VNFMHGRDDCEGIEVIKGVKLGGLPDALALVAQGKADPSEFKFFVRFCGWGPGQLAREVKLGAWYAAACDVGTVLDQYTDESQPAALWTEVLARMGGKYKTLAEKWGGADDLDSSYFNSYLNGNSGVPFLCALLRWGPGQLARKVKLGAWSAAACDMGTVLNQYTDESQPAALWTEVLARMGGKYKALAEMWGGHR 198
            VNFMHGRDDCEGIEVIKGVKLGGLPDALALVAQGKADPSEFKFFVRFCGWGPGQLAREVKLGAWYAAACDVGTVLDQYTDESQPAALWTEVLARMGGKYKTLAE                   NS    LCA    GP QLARKVKLGAWSAAACDMGTVLNQYTDESQPAALWTEVLARMGGKYKALAEMWGGHR
Sbjct:   32 VNFMHGRDDCEGIEVIKGVKLGGLPDALALVAQGKADPSEFKFFVRFCGWGPGQLAREVKLGAWYAAACDVGTVLDQYTDESQPAALWTEVLARMGGKYKTLAE-------------------NS----LCASAV-GPRQLARKVKLGAWSAAACDMGTVLNQYTDESQPAALWTEVLARMGGKYKALAEMWGGHR 203          
BLAST of jgi.p|Trimin1|354442 vs. uniprot
Match: A0A835YX41_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YX41_9STRA)

HSP 1 Score: 152 bits (383), Expect = 1.320e-42
Identity = 69/107 (64.49%), Postives = 81/107 (75.70%), Query Frame = 0
Query:    3 VNFMHGRDDCEGIEVIKGVKLGGLPDALALVAQGKADPSEFKFFVRFCGWGPGQLAREVKLGAWYAAACDVGTVLDQYTDESQPAALWTEVLARMGGKYKTLAEKWG 109
            VN MHGR+D EG E++KGVKLGGL +ALA VA+G A P EFKFF R+CGW PGQL  EVK G WY AACDV T+LD Y  + QP  LW++VL RMGGKY  +A +WG
Sbjct:  128 VNLMHGREDVEGTEILKGVKLGGLEEALARVAEGTAQPQEFKFFCRYCGWAPGQLQEEVKAGIWYLAACDVPTILDNYI-QGQPDGLWSDVLRRMGGKYADVANQWG 233          
BLAST of jgi.p|Trimin1|354442 vs. uniprot
Match: D7FWE5_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FWE5_ECTSI)

HSP 1 Score: 119 bits (297), Expect = 5.350e-31
Identity = 54/95 (56.84%), Postives = 68/95 (71.58%), Query Frame = 0
Query:    3 VNFMHGRDDCEGIEVIKGVKLGGLPDALALVAQGKADPSEFKFFVRFCGWGPGQLAREVKLGAWYAAACDVGTVLDQYTDESQPAALWTEVLARM 97
            VN MHGR D  G+EV+KG++LGGL +ALALVAQG+A P EFKFF R+ GWGPGQL  EV  GAW  AACD+ +VL+      QP   W +++ R+
Sbjct:   16 VNLMHGRADVPGMEVVKGLRLGGLKEALALVAQGRAQPEEFKFFSRYSGWGPGQLEAEVLGGAWELAACDLESVLESQNHPDQPGHFWGKIMGRL 110          
BLAST of jgi.p|Trimin1|354442 vs. uniprot
Match: A0A6H5JA69_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JA69_9PHAE)

HSP 1 Score: 123 bits (308), Expect = 3.330e-30
Identity = 55/95 (57.89%), Postives = 69/95 (72.63%), Query Frame = 0
Query:    3 VNFMHGRDDCEGIEVIKGVKLGGLPDALALVAQGKADPSEFKFFVRFCGWGPGQLAREVKLGAWYAAACDVGTVLDQYTDESQPAALWTEVLARM 97
            VN MHGR+D  G+EV+KG++LGGL +ALALVAQG+A P EFKFF R+ GWGPGQL  EV  GAW  AACD+ +VL+      QP   W E++ R+
Sbjct:  250 VNLMHGREDVPGMEVVKGLRLGGLKEALALVAQGRAQPEEFKFFSRYSGWGPGQLEAEVLAGAWELAACDLESVLESQNHPDQPGHFWGEIMGRL 344          
BLAST of jgi.p|Trimin1|354442 vs. uniprot
Match: A0A7S0S201_9CHLO (Hypothetical protein n=1 Tax=Chlamydomonas leiostraca TaxID=1034604 RepID=A0A7S0S201_9CHLO)

HSP 1 Score: 91.3 bits (225), Expect = 2.000e-18
Identity = 49/104 (47.12%), Postives = 60/104 (57.69%), Query Frame = 0
Query:    3 VNFMHGRDDCE-GIEVIKGVKLGGLPDALALVAQGKADPSEFKFFVRFCGWGPGQLAREVKLGAWYAAACDVGTVLDQYTDESQPAALWTEVLARMGGKYKTLA 105
            V  +H R D     EV+KGV LGG+  A  LVA GKADP EFK++V++ GWGPGQL  E K G W+ AA     +L +    S     W EVL  MGG Y  L+
Sbjct:  211 VAVLHARTDLPLSKEVVKGVHLGGVDAARELVAAGKADPLEFKWYVKYAGWGPGQLESECKAGVWFTAAASARVILGE-ARASDGCDRWHEVLGLMGGDYAELS 313          
BLAST of jgi.p|Trimin1|354442 vs. uniprot
Match: A0A7S4DEL3_HETAK (Hypothetical protein (Fragment) n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S4DEL3_HETAK)

HSP 1 Score: 81.6 bits (200), Expect = 5.410e-15
Identity = 43/97 (44.33%), Postives = 59/97 (60.82%), Query Frame = 0
Query:    3 VNFMHGRDDC-EGIEVIKG-VKLGGLPDALALVAQGKADPSEFKFFVRFCGWGPGQLAREVKLGAWYAAACDVGTVLDQYTDESQPAALWTEVLARM 97
            VN +H +    EG  V +G + LGGL +A   V +G+A P +FKFF ++CGW PGQLA E++ G W  AA D GTVL Q   ++    +W  +L RM
Sbjct:  194 VNVLHRQPGYREGAAVGRGGLWLGGLGEAARAVREGRAAPGDFKFFTKYCGWAPGQLAGEMRDGLWLVAAVDEGTVLGQDPRDATGRGMWRGILERM 290          
BLAST of jgi.p|Trimin1|354442 vs. uniprot
Match: A0A8J9SJ92_9CHLO (Probable UPF0301 protein BDI_1431 n=1 Tax=Coccomyxa sp. Obi TaxID=2315456 RepID=A0A8J9SJ92_9CHLO)

HSP 1 Score: 77.0 bits (188), Expect = 2.180e-13
Identity = 40/103 (38.83%), Postives = 57/103 (55.34%), Query Frame = 0
Query:   13 EGIEVIKGVKLGGLPDALALVAQGKADPSEFKFFVRFCGWGPGQLAREVKLGAWYAAACDVGTVLDQYTDESQPAA--LWTEVLARMGGKYKTLAEKWGGADD 113
            E +E+I+G+ +GG   A A V Q    P++FK+F R+ GWGPGQL RE   G W+ AA     VL Q   +   +   +W +VL  +GG    L++   GA D
Sbjct:  178 EAVEIIRGIYMGGFDAAKAAVNQKGMPPTDFKWFTRYSGWGPGQLQRECASGVWFTAAASSALVLQQGCADKADSGREMWHQVLNLIGGDLAELSKAQRGAFD 280          
BLAST of jgi.p|Trimin1|354442 vs. uniprot
Match: A0A7S2AN37_9CHLO (Hypothetical protein (Fragment) n=1 Tax=Pycnococcus provasolii TaxID=41880 RepID=A0A7S2AN37_9CHLO)

HSP 1 Score: 72.8 bits (177), Expect = 5.890e-12
Identity = 38/95 (40.00%), Postives = 52/95 (54.74%), Query Frame = 0
Query:    6 MHGRDDCEGI-EVIKGVKLGGLPDALALVAQGKADPSEFKFFVRFCGWGPGQLAREVKLGAWYAAACDVGTVLDQYTDESQPAALWTEVLARMGG 99
            +HG  D +G  EV  GV LGG    +  V+ G + P ++KFF + CGWG GQL REV+ G W+  +     +L Q     +P  LW EV+   GG
Sbjct:  149 IHGDGDVDGAREVTTGVYLGGYDSVVERVSDGSSKPQDYKFFSKCCGWGAGQLDREVEAGVWHPVSAARPLLLKQVLQLPKP--LWREVMELCGG 241          
The following BLAST results are available for this feature:
BLAST of jgi.p|Trimin1|354442 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 22
Match NameE-valueIdentityDescription
A0A836CG07_9STRA2.130e-147100.00Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A835ZEY4_9STRA8.170e-11788.78Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A836CDX0_9STRA1.700e-11185.71Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A835YX41_9STRA1.320e-4264.49Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
D7FWE5_ECTSI5.350e-3156.84Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5JA69_9PHAE3.330e-3057.89Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A7S0S201_9CHLO2.000e-1847.12Hypothetical protein n=1 Tax=Chlamydomonas leiostr... [more]
A0A7S4DEL3_HETAK5.410e-1544.33Hypothetical protein (Fragment) n=1 Tax=Heterosigm... [more]
A0A8J9SJ92_9CHLO2.180e-1338.83Probable UPF0301 protein BDI_1431 n=1 Tax=Coccomyx... [more]
A0A7S2AN37_9CHLO5.890e-1240.00Hypothetical protein (Fragment) n=1 Tax=Pycnococcu... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D3.40.1740.10coord: 2..116
e-value: 1.1E-22
score: 82.3
coord: 117..197
e-value: 1.7E-9
score: 39.3
NoneNo IPR availablePANTHERPTHR31984TRANSPORTER, PUTATIVE (DUF179)-RELATEDcoord: 11..106
coord: 137..192
NoneNo IPR availableSUPERFAMILY143456VC0467-likecoord: 13..110
NoneNo IPR availableSUPERFAMILY143456VC0467-likecoord: 128..194
IPR003774Protein of unknown function UPF0301PFAMPF02622DUF179coord: 130..184
e-value: 1.8E-5
score: 24.8
coord: 14..98
e-value: 1.3E-13
score: 51.3

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Contig_247contigContig_247:116284..126613 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Tribonema minus UTEX_B_31562021-06-17
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
jgi.p|Trimin1|354442mRNA_18403Tribonema minus UTEX_B_3156 mRNAContig_247 116284..126619 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Trimin1|354442|estExt_Genemark1.C_Ctg_2470013 ID=Trimin1|354442|estExt_Genemark1.C_Ctg_2470013|Name=jgi.p|Trimin1|354442|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=199bp
MFVNFMHGRDDCEGIEVIKGVKLGGLPDALALVAQGKADPSEFKFFVRFC
GWGPGQLAREVKLGAWYAAACDVGTVLDQYTDESQPAALWTEVLARMGGK
YKTLAEKWGGADDLDSSYFNSYLNGNSGVPFLCALLRWGPGQLARKVKLG
AWSAAACDMGTVLNQYTDESQPAALWTEVLARMGGKYKALAEMWGGHR*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR003774UPF0301