Trimin1|354436|estExt_Genemark1.C_Ctg_2460015 (polypeptide) Tribonema minus UTEX_B_3156

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
Namejgi.p|Trimin1|354436
Unique NameTrimin1|354436|estExt_Genemark1.C_Ctg_2460015
Typepolypeptide
OrganismTribonema minus UTEX_B_3156 (Tribonema minus UTEX_B_3156 )
Sequence length115
Homology
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BLAST of jgi.p|Trimin1|354436 vs. uniprot
Match: A0A836CI55_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CI55_9STRA)

HSP 1 Score: 109 bits (273), Expect = 8.410e-29
Identity = 114/114 (100.00%), Postives = 114/114 (100.00%), Query Frame = 0 
Query:    1 WLPLRPSSRPLCRWRRRRTRPRQEGLRAPLLPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCTRRVAAEWAEAVAAAAVACIVHATRVHSARHT 114
            WLPLRPSSRPLCRWRRRRTRPRQEGLRAPLLPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCTRRVAAEWAEAVAAAAVACIVHATRVHSARHT
Sbjct:    1 WLPLRPSSRPLCRWRRRRTRPRQEGLRAPLLPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCTRRVAAEWAEAVAAAAVACIVHATRVHSARHT 114
The following BLAST results are available for this feature:
BLAST of jgi.p|Trimin1|354436 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A836CI55_9STRA8.410e-29100.00Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 13..78

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Contig_246contigContig_246:68946..69767 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Tribonema minus UTEX_B_31562021-06-17
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
jgi.p|Trimin1|354436mRNA_17869Tribonema minus UTEX_B_3156 mRNAContig_246 68945..69773 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Trimin1|354436|estExt_Genemark1.C_Ctg_2460015 ID=Trimin1|354436|estExt_Genemark1.C_Ctg_2460015|Name=jgi.p|Trimin1|354436|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=115bp
WLPLRPSSRPLCRWRRRRTRPRQEGLRAPLLPPPPQRARRRGGSRRSRAL
RPPQRAAAASRPLLRGPPAAAAAAAGKARRRCTRRVAAEWAEAVAAAAVA
CIVHATRVHSARHT*
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