Trimin1|354345|estExt_Genemark1.C_Ctg_2320015 (polypeptide) Tribonema minus UTEX_B_3156

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
Namejgi.p|Trimin1|354345
Unique NameTrimin1|354345|estExt_Genemark1.C_Ctg_2320015
Typepolypeptide
OrganismTribonema minus UTEX_B_3156 (Tribonema minus UTEX_B_3156 )
Sequence length261
Homology
BLAST of jgi.p|Trimin1|354345 vs. uniprot
Match: A0A836CFQ5_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CFQ5_9STRA)

HSP 1 Score: 504 bits (1299), Expect = 2.160e-180
Identity = 260/260 (100.00%), Postives = 260/260 (100.00%), Query Frame = 0
Query:    1 MDMDAQAPPAVAALAALSSPILVCDPEELPHLQRLVSDEADAKVYEKNIHQTMTKFLDLRQSRKEEMYKVFKLISEKDHARERRQKVFEHFRDNISRVNSFQTGTVYEVTHEVLVFIDEFRELLDKLFSWCDLCLPANEQSFAESHRLKIQKFQMQIVNEMKRTNSARTQVNLHLTQRVETLRQLFTTKEVAAVNLEGWEKAHSELLTLQESNAYLVMGRSWEQLLESYLLLYNYWVLNLKHDSIVFGDAGRSSGNDYFA 260
            MDMDAQAPPAVAALAALSSPILVCDPEELPHLQRLVSDEADAKVYEKNIHQTMTKFLDLRQSRKEEMYKVFKLISEKDHARERRQKVFEHFRDNISRVNSFQTGTVYEVTHEVLVFIDEFRELLDKLFSWCDLCLPANEQSFAESHRLKIQKFQMQIVNEMKRTNSARTQVNLHLTQRVETLRQLFTTKEVAAVNLEGWEKAHSELLTLQESNAYLVMGRSWEQLLESYLLLYNYWVLNLKHDSIVFGDAGRSSGNDYFA
Sbjct:    1 MDMDAQAPPAVAALAALSSPILVCDPEELPHLQRLVSDEADAKVYEKNIHQTMTKFLDLRQSRKEEMYKVFKLISEKDHARERRQKVFEHFRDNISRVNSFQTGTVYEVTHEVLVFIDEFRELLDKLFSWCDLCLPANEQSFAESHRLKIQKFQMQIVNEMKRTNSARTQVNLHLTQRVETLRQLFTTKEVAAVNLEGWEKAHSELLTLQESNAYLVMGRSWEQLLESYLLLYNYWVLNLKHDSIVFGDAGRSSGNDYFA 260          
BLAST of jgi.p|Trimin1|354345 vs. uniprot
Match: D8LE75_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LE75_ECTSI)

HSP 1 Score: 290 bits (741), Expect = 3.520e-96
Identity = 148/229 (64.63%), Postives = 179/229 (78.17%), Query Frame = 0
Query:   32 LQRLVSDEADAKVYEKNIHQTMTKFLDLRQSRKEEMYKVFKLISEKDHARERRQKVFEHFRDNISRVNSFQTGTVYEVTHEVLVFIDEFRELLDKLFSWCDLCLPANEQSFAESHRLKIQKFQMQIVNEMKRTNSARTQVNLHLTQRVETLRQLFTTKEVAAVNLEGWEKAHSELLTLQESNAYLVMGRSWEQLLESYLLLYNYWVLNLKHDSIVFGDAGRSSGNDYFA 260
            LQR +  E D+KVYEKN+H TM +F +LR+ RK + Y+VFKL+ EKD+ARERR+KVFE+F   ISR N+FQTG +YEV+ E+L+ +DEFRELLD+LFSWCDLCLP N+Q+FAESHR KIQKFQ+QIV EMKR+NSAR+Q                   EV   NLE WEKAH +LLT QE+NAYL MGRSWEQ+LES LLLYNYW +NLK D+IVFGDAG+S+GNDYFA
Sbjct:    2 LQRSLGAETDSKVYEKNLHDTMAEFPELRKQRKIDYYRVFKLMDEKDNARERRRKVFEYFNGAISRQNNFQTGEIYEVSRELLMLVDEFRELLDRLFSWCDLCLPGNDQAFAESHRQKIQKFQVQIVQEMKRSNSARSQ-------------------EVDGGNLEAWEKAHHDLLTSQEANAYLQMGRSWEQILESLLLLYNYWKVNLKDDNIVFGDAGKSTGNDYFA 211          
BLAST of jgi.p|Trimin1|354345 vs. uniprot
Match: D7G572_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G572_ECTSI)

HSP 1 Score: 209 bits (531), Expect = 6.990e-63
Identity = 109/234 (46.58%), Postives = 148/234 (63.25%), Query Frame = 0
Query:   26 PEELPHLQRLVSDEADAKVYEKNIHQTMTKFLDLRQSRKEEMYKVFKLISEKDHARERRQKVFEHFRDNISRVNSFQTGTVYEVTHEVLVFIDEFRELLDKLFSWCDLCLPANEQSFAESHRLKIQKFQMQIVNEMKRTNSARTQVNLHLTQRVETLRQLFTTKEVAAVNLEGWEKAHSELLTLQESNAYLVMGRSWEQLLESYLLLYNYWVLNLKHDSIVFGDAGRSSGNDYF 259
            P     L+RL++ E+D KVYE NIH  M +    R+ RK++  +V  L +    A++RR KVFE+F   +++ N FQ   VY V+ ++L  +DE RE L+ L +WCDLCLPANEQ+FAE+HR+KIQ FQ  +   +    S    +N  L +R +TLR LF+TK+V   N EGW + H E+L   E NAYL    SWE+LLE YLL YNY+ +NLK  +IVF   G+  GNDYF
Sbjct:   86 PGSQKRLKRLLTQESDLKVYEANIHDMMKQMPAQRERRKKDFERVLTLFASDSLAKDRRNKVFEYFDKAVTKANCFQVKEVYSVSQDLLSVLDEARETLELLVNWCDLCLPANEQAFAEAHRIKIQHFQDYLSAGLSSVVSETADINTQLDKRAQTLRSLFSTKDVLPENQEGWYRLHREMLVHHEVNAYLSAATSWEKLLEDYLLYYNYYKMNLKDSTIVFQSEGKGGGNDYF 319          
BLAST of jgi.p|Trimin1|354345 vs. uniprot
Match: A0A836C7X8_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836C7X8_9STRA)

HSP 1 Score: 197 bits (502), Expect = 1.700e-59
Identity = 107/229 (46.72%), Postives = 148/229 (64.63%), Query Frame = 0
Query:   32 LQRLVSDEADAKVYEKNIHQTMTKFLDLRQSRKEEMYKVFKLISEKDHARERRQKVFEHFRDNISRVNSFQTGTVYEVTHEVLVFIDEFRELLDKLFSWCDLCLPANEQSFAESHRLKIQKFQMQIVNEMKRTNSARTQVNLHLTQRVETLRQLFTTKEVAAVNLEGWEKAHSELLTLQESNAYLVMGRSWEQLLESYLLLYNYWVLNLKHDSIVFGDAGRSS-GNDYF 259
            L+R ++ EAD KVYE+NIH+TM +   LR + +++  K   L S  D A++RR KVF  F  NI+   S+QT  V++++ EVL  +DE RELL+ L +WCDLCLPANE +FAE+ R+KIQ FQ  +   +    ++  +VNL L +R  TL+ LFTTK+V   N  GW KAH +LL   E+NAYL M + WE++LE Y+L +NYW  NLK   + F   G+   G DYF
Sbjct:   15 LRRQLTHEADIKVYERNIHETMQELPKLRDACEQDYTKCVTLFSTDDSAKDRRTKVFAFFDANITEATSYQTDQVFKLSEEVLSVLDECRELLELLMNWCDLCLPANETAFAEALRIKIQDFQEYLSGGVTGLANSTNEVNLQLEKRARTLQLLFTTKDVLPENRAGWIKAHRDLLVHCETNAYLRMAKIWEKVLEDYVLYFNYWKTNLKDGDLAFAHMGKGERGGDYF 243          
BLAST of jgi.p|Trimin1|354345 vs. uniprot
Match: D8LEA5_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LEA5_ECTSI)

HSP 1 Score: 172 bits (435), Expect = 2.060e-49
Identity = 93/225 (41.33%), Postives = 133/225 (59.11%), Query Frame = 0
Query:   35 LVSDEADAKVYEKNIHQTMTKFLDLRQSRKEEMYKVFKLISEKDHARERRQKVFEHFRDNISRVNSFQTGTVYEVTHEVLVFIDEFRELLDKLFSWCDLCLPANEQSFAESHRLKIQKFQMQIVNEMKRTNSARTQVNLHLTQRVETLRQLFTTKEVAAVNLEGWEKAHSELLTLQESNAYLVMGRSWEQLLESYLLLYNYWVLNLKHDSIVFGDAGRSSGNDYF 259
            L     D K YE+N+H+TM     LR+ R  +   +F L+   D AR RR+KV + F    ++ N  + G + E +H+ LV IDE REL+D+L SW  +CLPAN+   + SHR K++ F+ ++ NE+K     R+ V    + RV T+R +F TK+VA  NL GWE AH ELL +QE+ AYL M R W   ++S LL+Y YW +NLK   I F      +G+ +F
Sbjct:   19 LTEAHGDPKTYERNVHETMAGLPGLREKRLADYESIFTLVDANDTARARRRKVLDFFMTR-TKENLNRAGQIQECSHQCLVLIDELRELMDRLISWLTMCLPANDHPLSVSHRRKLKLFKGRLRNEVKILEGLRSGVTSAHSGRVHTIRSMFLTKDVAENNLLGWETAHHELLVMQETEAYLSMCRFWMSTMDSALLVYKYWKVNLKDADIAFATGNNGNGHHHF 242          
The following BLAST results are available for this feature:
BLAST of jgi.p|Trimin1|354345 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 5
Match NameE-valueIdentityDescription
A0A836CFQ5_9STRA2.160e-180100.00Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
D8LE75_ECTSI3.520e-9664.63Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
D7G572_ECTSI6.990e-6346.58Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A836C7X8_9STRA1.700e-5946.72Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
D8LEA5_ECTSI2.060e-4941.33Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Contig_232contigContig_232:122159..126514 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Tribonema minus UTEX_B_31562021-06-17
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
jgi.p|Trimin1|354345mRNA_17848Tribonema minus UTEX_B_3156 mRNAContig_232 122124..126514 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Trimin1|354345|estExt_Genemark1.C_Ctg_2320015 ID=Trimin1|354345|estExt_Genemark1.C_Ctg_2320015|Name=jgi.p|Trimin1|354345|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=261bp
MDMDAQAPPAVAALAALSSPILVCDPEELPHLQRLVSDEADAKVYEKNIH
QTMTKFLDLRQSRKEEMYKVFKLISEKDHARERRQKVFEHFRDNISRVNS
FQTGTVYEVTHEVLVFIDEFRELLDKLFSWCDLCLPANEQSFAESHRLKI
QKFQMQIVNEMKRTNSARTQVNLHLTQRVETLRQLFTTKEVAAVNLEGWE
KAHSELLTLQESNAYLVMGRSWEQLLESYLLLYNYWVLNLKHDSIVFGDA
GRSSGNDYFA*
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