Homology
BLAST of jgi.p|Trimin1|354334 vs. uniprot
Match:
A0A835YZS9_9STRA (Zn(2)-C6 fungal-type domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YZS9_9STRA)
HSP 1 Score: 227 bits (578), Expect = 8.020e-72
Identity = 224/224 (100.00%), Postives = 224/224 (100.00%), Query Frame = 0
Query: 1 MGAQQQKGPVKSSRQRGSRTACDSCATRKRRCDGDGTNACXXXXXXRRPCVYSKXXXXXXXXXRPYAKTAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAAQIVARLPRGHISRSPATGSSLWRLRQRQPARGASGQDGARIAHLLPSRLPARIVAGPMRRHRERMWQVSAARLRG 224
MGAQQQKGPVKSSRQRGSRTACDSCATRKRRCDGDGTNACXXXXXXRRPCVYSKXXXXXXXXXRPYAKTAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAAQIVARLPRGHISRSPATGSSLWRLRQRQPARGASGQDGARIAHLLPSRLPARIVAGPMRRHRERMWQVSAARLRG
Sbjct: 1 MGAQQQKGPVKSSRQRGSRTACDSCATRKRRCDGDGTNACXXXXXXRRPCVYSKXXXXXXXXXRPYAKTAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAAQIVARLPRGHISRSPATGSSLWRLRQRQPARGASGQDGARIAHLLPSRLPARIVAGPMRRHRERMWQVSAARLRG 224
The following BLAST results are available for this feature:
BLAST of jgi.p|Trimin1|354334 vs. uniprot
Analysis Date: 2022-09-16 (
Diamond blastp: OGS1.0 vs UniRef90 )
Total hits: 1
M G A Q Q Q K G P V K S S R Q R G S R T A C D S C A T R K R R C D G D G T N A C S L C A R R R R P C V Y S K R R R S C V Y S K R P Y A K T A A A A A A A A A A A A A P L S A A S S T V T S A A S S T T S S P P M T P P A G S P H S P P P E E P P Q Q Q Q Q P R R Q L R R R R A S G G A T A A E A P A A A A Q I V A R L P R G H I S R S P A T G S S L W R L R Q R Q P A R G A S G Q D G A R I A H L L P S R L P A R I V A G P M R R H R E R M W Q V S A A R L R G * 20 40 60 80 100 120 140 160 180 200 220 Expect = 8.02e-72 / Id = 100.00 Sequence A0A835YZS9_9STRA
Match Name E-value Identity Description
A0A835YZS9_9STRA 8.020e-72 100.00 Zn(2)-C6 fungal-type domain-containing protein n=1... [more]
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InterPro
Analysis Name:
InterProScan on OGS1.0
Date Performed: 2022-09-29
M G A Q Q Q K G P V K S S R Q R G S R T A C D S C A T R K R R C D G D G T N A C S L C A R R R R P C V Y S K R R R S C V Y S K R P Y A K T A A A A A A A A A A A A A P L S A A S S T V T S A A S S T T S S P P M T P P A G S P H S P P P E E P P Q Q Q Q Q P R R Q L R R R R A S G G A T A A E A P A A A A Q I V A R L P R G H I S R S P A T G S S L W R L R Q R Q P A R G A S G Q D G A R I A H L L P S R L P A R I V A G P M R R H R E R M W Q V S A A R L R G * 20 40 60 80 100 120 140 160 180 200 220 Expect = 0.0035 / Score = 26.6 Expect = 2.4E-6 / Score = 27.6 Score = Score = 9.446 Expect = 8.41664E-6 / Score = 39.569 Expect = 3.0E-7 / Score = 32.7 Score = Score = Score = Score = Sequence SM00066 PF00172 PS00463 PS50048 cd00067 G3DSA:4.10.240.10 SSF57701 mobidb-lite mobidb-lite mobidb-lite
IPR Term IPR Description Source Source Term Source Description Alignment
IPR001138 Zn(2)-C6 fungal-type DNA-binding domain SMART SM00066 gal4_2 coord: 16..61 IPR001138 Zn(2)-C6 fungal-type DNA-binding domain PFAM PF00172 Zn_clus coord: 20..57 IPR001138 Zn(2)-C6 fungal-type DNA-binding domain PROSITE PS00463 ZN2_CY6_FUNGAL_1 coord: 21..50 IPR001138 Zn(2)-C6 fungal-type DNA-binding domain PROSITE PS50048 ZN2_CY6_FUNGAL_2 coord: 21..52 IPR001138 Zn(2)-C6 fungal-type DNA-binding domain CDD cd00067 GAL4 coord: 18..53 IPR036864 Zn(2)-C6 fungal-type DNA-binding domain superfamily GENE3D 4.10.240.10 coord: 20..101 IPR036864 Zn(2)-C6 fungal-type DNA-binding domain superfamily SUPERFAMILY 57701 Zn2/Cys6 DNA-binding domain coord: 12..57 None No IPR available MOBIDB_LITE mobidb-lite disorder_prediction coord: 104..122 None No IPR available MOBIDB_LITE mobidb-lite disorder_prediction coord: 93..150 None No IPR available MOBIDB_LITE mobidb-lite disorder_prediction coord: 1..20
Alignments
The following features are aligned
Analyses
This polypeptide is derived from or has results from the following analyses
Relationships
This polypeptide derives from the following mRNA feature(s):
Sequences
The following sequences are available for this feature:
polypeptide sequence
>Trimin1|354334|estExt_Genemark1.C_Ctg_2310018 ID=Trimin1|354334|estExt_Genemark1.C_Ctg_2310018|Name=jgi.p|Trimin1|354334|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=225bp back to top
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
Term Definition
IPR001138 Zn2-C6_fun-type_DNA-bd IPR036864 Zn2-C6_fun-type_DNA-bd_sf