Trimin1|354299|estExt_Genemark1.C_Ctg_2270013 (polypeptide) Tribonema minus UTEX_B_3156

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
Namejgi.p|Trimin1|354299
Unique NameTrimin1|354299|estExt_Genemark1.C_Ctg_2270013
Typepolypeptide
OrganismTribonema minus UTEX_B_3156 (Tribonema minus UTEX_B_3156 )
Sequence length662
Homology
BLAST of jgi.p|Trimin1|354299 vs. uniprot
Match: A0A836CGJ9_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CGJ9_9STRA)

HSP 1 Score: 944 bits (2439), Expect = 0.000e+0
Identity = 661/661 (100.00%), Postives = 661/661 (100.00%), Query Frame = 0
Query:    1 MTLGAQAAXXXXXXXXXXXXDGLSAHGRDDAXXXXXXXGAVSGEEARREGAVAARAQLEEHAKALANMREQHDLALQQVIQEKDAEYHKATENHKKALNDVQLELLNNRQHMINTEAQWRRRLEDVEQRERAELARTKEHFEALLARAKGETAAALEGLGRALWKFGGDGQAIAAAREGQLLYSASWSHVGGAQYEAVTLSKPLPPRMLHLPLGGIASAAGLAASIALARDVPLTARTDAPHPSRACALTGPLVAPPVTLRGGSAVAAGAAAGALDGGYPSGSGLSREAGEGGGLQGGXXXXAGDVDKLRSLAMLLEESRKEARWLRDRNGESERVIEALRKTIMRQAELNSQRDSSTGXXXXXXXXXXXXINTNNGPLRGHHYAGPRGPPSRGPRPGPPDWQSERAPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDPDRSWGARSAPLPLHDAPDRSRXXXXXXXQAAAAALQQYLAAVPAAAAQQPWDRAPLRDSAAFLTMPYPPGAAPPAFGPGALFKHVGGGXXXXXXXXXXXXXXXXXAHAMHHALPTRSSSSPHLQAHAQLGXXXXXXXXXXXXXAMRMPQPRQPASMLSRPGSMSSLNHIHEDVHEYEPGAGELDTATSVLSGF 661
            MTLGAQAAXXXXXXXXXXXXDGLSAHGRDDAXXXXXXXGAVSGEEARREGAVAARAQLEEHAKALANMREQHDLALQQVIQEKDAEYHKATENHKKALNDVQLELLNNRQHMINTEAQWRRRLEDVEQRERAELARTKEHFEALLARAKGETAAALEGLGRALWKFGGDGQAIAAAREGQLLYSASWSHVGGAQYEAVTLSKPLPPRMLHLPLGGIASAAGLAASIALARDVPLTARTDAPHPSRACALTGPLVAPPVTLRGGSAVAAGAAAGALDGGYPSGSGLSREAGEGGGLQGGXXXXAGDVDKLRSLAMLLEESRKEARWLRDRNGESERVIEALRKTIMRQAELNSQRDSSTGXXXXXXXXXXXXINTNNGPLRGHHYAGPRGPPSRGPRPGPPDWQSERAPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDPDRSWGARSAPLPLHDAPDRSRXXXXXXXQAAAAALQQYLAAVPAAAAQQPWDRAPLRDSAAFLTMPYPPGAAPPAFGPGALFKHVGGGXXXXXXXXXXXXXXXXXAHAMHHALPTRSSSSPHLQAHAQLGXXXXXXXXXXXXXAMRMPQPRQPASMLSRPGSMSSLNHIHEDVHEYEPGAGELDTATSVLSGF
Sbjct:    1 MTLGAQAAXXXXXXXXXXXXDGLSAHGRDDAXXXXXXXGAVSGEEARREGAVAARAQLEEHAKALANMREQHDLALQQVIQEKDAEYHKATENHKKALNDVQLELLNNRQHMINTEAQWRRRLEDVEQRERAELARTKEHFEALLARAKGETAAALEGLGRALWKFGGDGQAIAAAREGQLLYSASWSHVGGAQYEAVTLSKPLPPRMLHLPLGGIASAAGLAASIALARDVPLTARTDAPHPSRACALTGPLVAPPVTLRGGSAVAAGAAAGALDGGYPSGSGLSREAGEGGGLQGGXXXXAGDVDKLRSLAMLLEESRKEARWLRDRNGESERVIEALRKTIMRQAELNSQRDSSTGXXXXXXXXXXXXINTNNGPLRGHHYAGPRGPPSRGPRPGPPDWQSERAPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDPDRSWGARSAPLPLHDAPDRSRXXXXXXXQAAAAALQQYLAAVPAAAAQQPWDRAPLRDSAAFLTMPYPPGAAPPAFGPGALFKHVGGGXXXXXXXXXXXXXXXXXAHAMHHALPTRSSSSPHLQAHAQLGXXXXXXXXXXXXXAMRMPQPRQPASMLSRPGSMSSLNHIHEDVHEYEPGAGELDTATSVLSGF 661          
BLAST of jgi.p|Trimin1|354299 vs. uniprot
Match: A0A835YKF1_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YKF1_9STRA)

HSP 1 Score: 246 bits (627), Expect = 6.430e-69
Identity = 276/649 (42.53%), Postives = 298/649 (45.92%), Query Frame = 0
Query:   63 KALANMREQHDLALQQVIQEKDAEYHKATENHKKALNDVQLELLNNRQHMINTEAQWRRRLEDVEQRERAELARTKEHFEALLARAKGETAAALEGLGRALWKFGGDGQAIAAAREGQLLYSASWSHVGGAQYEAVTLSKPLPPRMLHLPLGGIASAAGLAASIALARDVPLTARTDAPHPSRACALTGPLVAPPVTLRGGSAVAAGAAAGALDGGYPSGSGLSREAGEGGGLQGGXXXXAGDVDKLRSLAMLLEESRKEARWLRDRNGESERVIEALRKTIMRQAELNSQRDSS--TGXXXXXXXXXXXXINTNNGPLRGHHYAGPRGPPSRGPRPGPPDWQSERAPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDPDRSWGARSAPLPLHDAPDRSRXXXXXXXQAAAAAL-----QQYLAAVPAAAAQQP-----WDRAPLRDSA---AFLTMPYP----------PGAAPPAFGPGALFKHVGGGXXXXXXXXXXXXXXXXXAHAMH----HALPTRSSSSPHLQAHAQL-----------GXXXXXXXXXXXXXAMRMPQPRQPASM----------LSRPGSMSSLNHIHEDVHEYEPGAGELDTATSVLSGF 661
            + LANMREQHDLALQQVIQEKDAE+HKA E  KK+LND QLELLNNRQHMINTEAQWRRRLE+VEQRERAE+AR K+H+E LLARAK ETAAALEGLG                                                                                                       SAVAAGAAAG LDG +  G+G     GE      G    A D +K+RSLA+LLEESRKEA+WLRDR  ESER+IEALRKTIMRQAEL+SQRD++   G    XXXXXXXX      P R     G RG    GPR G  DWQ +RAP                                        XXXXXX             PDRSW +RSAPLPL DAPDRSR       QAAA A      Q  L   P    QQP     WD   LR  A   A L    P           GA P   G   L +   GG              XXX           L  RS+SSP L     L            XXXXXXXXX     MRMPQPRQ              LSR  S+ SLN I ED HEYEPGAGELDTATSVL GF
Sbjct:  107 RVLANMREQHDLALQQVIQEKDAEHHKAAEMFKKSLNDSQLELLNNRQHMINTEAQWRRRLEEVEQRERAEVARIKDHYEGLLARAKSETAAALEGLG-------------------------------------------------------------------------------------------------------SAVAAGAAAGNLDGVHSGGAG-----GE------GTQVSAADSEKIRSLAVLLEESRKEAKWLRDRTSESERIIEALRKTIMRQAELSSQRDNAHAAGPKAGXXXXXXXXXXXXXXPNRPLGPQGGRG----GPRGG--DWQGDRAPPHHHRGDRDHYNNGLGLRQHSGPGARAPPAHVPPPHLHGGXXXXXXYGDPAGGL-----PDRSW-SRSAPLPLPDAPDRSRSAPLPEHQAAAHAXXXXAQQHALLGPPMLPLQQPQQHPQWD---LRGGAVPPANLQQQQPRDPFMGGGGGSGAFPMGLGAPPLHQQQYGGGAFDSAPGYGAPLPXXXXXXXQLRGPAGLTQRSNSSPVLNMPGSLLGGXXXXXXXXXXXXXXXXXXDALGGMRMPQPRQSGDXXXXXXXXGYALSRAASVGSLNFISEDAHEYEPGAGELDTATSVL-GF 625          
BLAST of jgi.p|Trimin1|354299 vs. uniprot
Match: A0A6H5KMF9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KMF9_9PHAE)

HSP 1 Score: 116 bits (291), Expect = 2.950e-23
Identity = 103/305 (33.77%), Postives = 133/305 (43.61%), Query Frame = 0
Query:   58 LEEHAKALANMREQHDLALQQVIQEKDAEYHKATENHKKALNDVQLELLNNRQHMINTEAQWRRRLEDVEQRERAELARTKEHFEALLARAKGETA---AALEGLGRALWKFGGDGQAIAAAREGQLLYSASWSHVGGAQYEAVTLSKPLPPRMLHLPLGGIASAAGLAASIALARDVPLTARTDAPHPSRACALTGPLVAPPVTLRGGSAVAAGAAAGALDGGYPSGSGLSREAGEGGGLQGGXXXXAGDVDKLRSLAMLLEESRKEARWLRDRNGESERVIEALRKTIMRQAELNSQRDSSTG 359
            +++H K + ++REQHD  +QQ++ EKD E  K TE+ KK LN+VQLELLNNRQHMINTEAQWR+RLE+ EQRE  E+ R +E F+  LA  K + +   AA+ GLG            +A  R             GGA                 L                            A H                                                                 K+RSL++L+EE++KE+RWLR+RN E ERV+EALRKTIMRQAEL+SQR    G
Sbjct:  228 IDQHEKFVRDLREQHDQTIQQILMEKDVENSKCTESFKKQLNEVQLELLNNRQHMINTEAQWRKRLEEQEQRESGEMMRMREAFQDELASVKSDLSTAHAAMGGLGS---------MGMADGRR------------GGAXXXXXXXXXXXXXXXXXLXXXXX--------------------XXXADH-----------------------------------------------------------------KVRSLSLLVEEAKKESRWLRERNQELERVVEALRKTIMRQAELSSQRQDQQG 426          
BLAST of jgi.p|Trimin1|354299 vs. uniprot
Match: D7FTA0_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FTA0_ECTSI)

HSP 1 Score: 105 bits (263), Expect = 2.780e-20
Identity = 93/302 (30.79%), Postives = 123/302 (40.73%), Query Frame = 0
Query:   58 LEEHAKALANMREQHDLALQQVIQEKDAEYHKATENHKKALNDVQLELLNNRQHMINTEAQWRRRLEDVEQRERAELARTKEHFEALLARAKGETAAALEGLGRALWKFGGDGQAIAAAREGQLLYSASWSHVGGAQYEAVTLSKPLPPRMLHLPLGGIASAAGLAASIALARDVPLTARTDAPHPSRACALTGPLVAPPVTLRGGSAVAAGAAAGALDGGYPSGSGLSREAGEGGGLQGGXXXXAGDVDKLRSLAMLLEESRKEARWLRDRNGESERVIEALRKTIMRQAELNSQRDSSTG 359
            +++  K + ++REQHD  +QQ++ EKD E  K TE+ KK LN+VQLELLNNRQHMINTEAQWR+RLE+ EQRE  E+ R +E F+  LA  K + + A   +G         G       +G                                                                                                                                K+RSL++L+EE++KE+RWLR+RN E ERV+EALRKTIMRQAEL+SQR    G
Sbjct:  277 VDQQEKFVRDLREQHDQTIQQILMEKDVENSKCTESFKKQLNEVQLELLNNRQHMINTEAQWRKRLEEQEQRESGEMMRMREAFQDELASVKSDLSTAHAAMG---------GLGAXXMADGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXD----------------------------------------------------------------------------------------------HKVRSLSLLVEEAKKESRWLRERNQELERVVEALRKTIMRQAELSSQRQDQQG 475          
The following BLAST results are available for this feature:
BLAST of jgi.p|Trimin1|354299 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 4
Match NameE-valueIdentityDescription
A0A836CGJ9_9STRA0.000e+0100.00Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A835YKF1_9STRA6.430e-6942.53Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A6H5KMF9_9PHAE2.950e-2333.77Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7FTA0_ECTSI2.780e-2030.79Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 51..78
NoneNo IPR availableCOILSCoilCoilcoord: 80..100
NoneNo IPR availableCOILSCoilCoilcoord: 131..151
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 390..404
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 405..420
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 282..302
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 347..493

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Contig_227contigContig_227:80137..83703 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Tribonema minus UTEX_B_31562021-06-17
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
jgi.p|Trimin1|354299mRNA_17565Tribonema minus UTEX_B_3156 mRNAContig_227 80137..84205 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Trimin1|354299|estExt_Genemark1.C_Ctg_2270013 ID=Trimin1|354299|estExt_Genemark1.C_Ctg_2270013|Name=jgi.p|Trimin1|354299|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=662bp
MTLGAQAAQAAAAAAAAAAADGLSAHGRDDAQAAQAAAGAVSGEEARREG
AVAARAQLEEHAKALANMREQHDLALQQVIQEKDAEYHKATENHKKALND
VQLELLNNRQHMINTEAQWRRRLEDVEQRERAELARTKEHFEALLARAKG
ETAAALEGLGRALWKFGGDGQAIAAAREGQLLYSASWSHVGGAQYEAVTL
SKPLPPRMLHLPLGGIASAAGLAASIALARDVPLTARTDAPHPSRACALT
GPLVAPPVTLRGGSAVAAGAAAGALDGGYPSGSGLSREAGEGGGLQGGGG
GGAGDVDKLRSLAMLLEESRKEARWLRDRNGESERVIEALRKTIMRQAEL
NSQRDSSTGGGGGGGGGGSGGINTNNGPLRGHHYAGPRGPPSRGPRPGPP
DWQSERAPPHHHHRGDGSGGGGAPHRDAHYNSRSGGGGRGGGGGGPPHLR
APPPHHHGNYQDDGGGDPDRSWGARSAPLPLHDAPDRSRSAPLPEHQAAA
AALQQYLAAVPAAAAQQPWDRAPLRDSAAFLTMPYPPGAAPPAFGPGALF
KHVGGGGGGGGARGGDGGGYGGGAHAMHHALPTRSSSSPHLQAHAQLGGG
GGGAMAAQGGGAMRMPQPRQPASMLSRPGSMSSLNHIHEDVHEYEPGAGE
LDTATSVLSGF*
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