Trimin1|354284|estExt_Genemark1.C_Ctg_2250017 (polypeptide) Tribonema minus UTEX_B_3156

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	jgi.p\|Trimin1\|354284
Unique Name	Trimin1\|354284\|estExt_Genemark1.C_Ctg_2250017
Type	polypeptide
Organism	Tribonema minus UTEX_B_3156 (Tribonema minus UTEX_B_3156 )
Sequence length	615

Homology

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BLAST of jgi.p|Trimin1|354284 vs. uniprot
Match: A0A835Z0R7_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z0R7_9STRA)

HSP 1 Score: 1004 bits (2596), Expect = 0.000e+0
Identity = 614/614 (100.00%), Postives = 614/614 (100.00%), Query Frame = 0

Query:    1 MRVVRVLIVAHLYQVASERGARRYGLALATTMATAAVRLAAGDXXXXXXXXXXXXXALLPGRAPPALALDKQRLQVAVCLAKRQDFTDLPAYAHATALVHEVDAAEERWLRGERTGLPAVQGVPMAAELSASSAACAQQAAARFSGKLRYVVGSGTRAAALTVPYINKDWHVRAAARAASGYQENARSMMSIISRMTCLSIDDGRGGSGGSAPVVSCTEDEISGLVASSTRDGDVMERRHEATVNGVTTAAVTSTQLTVAAVSTAERPPAVNGAAAHPPPQQSVQSQSQVAGYISITSDMMRAQDRARRETDARLLELREKHKQQWLAANEEAGQLLRQTTHFKMAEDLHREQQRFELLRAEEKRAHRDALEARQRQKEEREREEAALDAQLQRDLAALNRWGRAGPLLACAVAATALLTRGSVWSLVADALSRYFRQCDNPAPPASYSYAHYYPSFSPWDLLSWAVPASAARTYCQLSLALRAAAAAAPLALLQRALPALAGSAAMPLAAALCTSYAVTGRWLPVAVIARALWLPAPAAIXXXXXXXXXXXXXXXXRGWGSACVRVGVXXXXXXXXXXXXXXXXXXXXXXSGECAARVLQALRQHASAVLARM 614
            MRVVRVLIVAHLYQVASERGARRYGLALATTMATAAVRLAAGDXXXXXXXXXXXXXALLPGRAPPALALDKQRLQVAVCLAKRQDFTDLPAYAHATALVHEVDAAEERWLRGERTGLPAVQGVPMAAELSASSAACAQQAAARFSGKLRYVVGSGTRAAALTVPYINKDWHVRAAARAASGYQENARSMMSIISRMTCLSIDDGRGGSGGSAPVVSCTEDEISGLVASSTRDGDVMERRHEATVNGVTTAAVTSTQLTVAAVSTAERPPAVNGAAAHPPPQQSVQSQSQVAGYISITSDMMRAQDRARRETDARLLELREKHKQQWLAANEEAGQLLRQTTHFKMAEDLHREQQRFELLRAEEKRAHRDALEARQRQKEEREREEAALDAQLQRDLAALNRWGRAGPLLACAVAATALLTRGSVWSLVADALSRYFRQCDNPAPPASYSYAHYYPSFSPWDLLSWAVPASAARTYCQLSLALRAAAAAAPLALLQRALPALAGSAAMPLAAALCTSYAVTGRWLPVAVIARALWLPAPAAIXXXXXXXXXXXXXXXXRGWGSACVRVGVXXXXXXXXXXXXXXXXXXXXXXSGECAARVLQALRQHASAVLARM
Sbjct:    1 MRVVRVLIVAHLYQVASERGARRYGLALATTMATAAVRLAAGDXXXXXXXXXXXXXALLPGRAPPALALDKQRLQVAVCLAKRQDFTDLPAYAHATALVHEVDAAEERWLRGERTGLPAVQGVPMAAELSASSAACAQQAAARFSGKLRYVVGSGTRAAALTVPYINKDWHVRAAARAASGYQENARSMMSIISRMTCLSIDDGRGGSGGSAPVVSCTEDEISGLVASSTRDGDVMERRHEATVNGVTTAAVTSTQLTVAAVSTAERPPAVNGAAAHPPPQQSVQSQSQVAGYISITSDMMRAQDRARRETDARLLELREKHKQQWLAANEEAGQLLRQTTHFKMAEDLHREQQRFELLRAEEKRAHRDALEARQRQKEEREREEAALDAQLQRDLAALNRWGRAGPLLACAVAATALLTRGSVWSLVADALSRYFRQCDNPAPPASYSYAHYYPSFSPWDLLSWAVPASAARTYCQLSLALRAAAAAAPLALLQRALPALAGSAAMPLAAALCTSYAVTGRWLPVAVIARALWLPAPAAIXXXXXXXXXXXXXXXXRGWGSACVRVGVXXXXXXXXXXXXXXXXXXXXXXSGECAARVLQALRQHASAVLARM 614

The following BLAST results are available for this feature:

BLAST of jgi.p|Trimin1|354284 vs. uniprot

BLAST of jgi.p|Trimin1|354284 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1


Match Name	E-value	Identity	Description
A0A835Z0R7_9STRA	0.000e+0	100.00	Uncharacterized protein n=1 Tax=Tribonema minus Ta...	[more]

InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 360..394

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
Contig_225	contig	Contig_225:119808..126728 +

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-09-29
Diamond blastp: OGS1.0 vs UniRef90	2022-09-16
OGS1.0 of Tribonema minus UTEX_B_3156	2021-06-17

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
jgi.p\|Trimin1\|354284	mRNA_17681	Tribonema minus UTEX_B_3156	mRNA	Contig_225 119808..127005 +

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>Trimin1|354284|estExt_Genemark1.C_Ctg_2250017 ID=Trimin1|354284|estExt_Genemark1.C_Ctg_2250017|Name=jgi.p|Trimin1|354284|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=615bp
MRVVRVLIVAHLYQVASERGARRYGLALATTMATAAVRLAAGDDSGDDGG
GGSGAAALLPGRAPPALALDKQRLQVAVCLAKRQDFTDLPAYAHATALVH
EVDAAEERWLRGERTGLPAVQGVPMAAELSASSAACAQQAAARFSGKLRY
VVGSGTRAAALTVPYINKDWHVRAAARAASGYQENARSMMSIISRMTCLS
IDDGRGGSGGSAPVVSCTEDEISGLVASSTRDGDVMERRHEATVNGVTTA
AVTSTQLTVAAVSTAERPPAVNGAAAHPPPQQSVQSQSQVAGYISITSDM
MRAQDRARRETDARLLELREKHKQQWLAANEEAGQLLRQTTHFKMAEDLH
REQQRFELLRAEEKRAHRDALEARQRQKEEREREEAALDAQLQRDLAALN
RWGRAGPLLACAVAATALLTRGSVWSLVADALSRYFRQCDNPAPPASYSY
AHYYPSFSPWDLLSWAVPASAARTYCQLSLALRAAAAAAPLALLQRALPA
LAGSAAMPLAAALCTSYAVTGRWLPVAVIARALWLPAPAAIAAAAAAAAR
RRRRQRRRGWGSACVRVGVPAAVVAAAAWCGLRVGCQRGGGSGECAARVL
QALRQHASAVLARM*