Trimin1|354238|estExt_Genemark1.C_Ctg_2200020 (polypeptide) Tribonema minus UTEX_B_3156

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
Namejgi.p|Trimin1|354238
Unique NameTrimin1|354238|estExt_Genemark1.C_Ctg_2200020
Typepolypeptide
OrganismTribonema minus UTEX_B_3156 (Tribonema minus UTEX_B_3156 )
Sequence length201
Homology
BLAST of jgi.p|Trimin1|354238 vs. uniprot
Match: A0A835Z2J1_9STRA (Vesicle transport protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z2J1_9STRA)

HSP 1 Score: 393 bits (1010), Expect = 2.470e-138
Identity = 200/200 (100.00%), Postives = 200/200 (100.00%), Query Frame = 0
Query:    1 MPDLASVSSFIEDRRASASGAYESVRVSTRRLLGQEEAPLKTRAEELEEYVCSFCPSLTYKQRLIGFGVCLTLGFILTFGALFRIVRLVAGNPLPFVINYSIGNVISICASFFLNGPWAQIKKMFEPTRVVATGVYITTLGLTFAVALAPRMPLRAPLLVTLVVLQFMSFIWYALSYIPFAREWAAGACRSGRCCGGDSV 200
            MPDLASVSSFIEDRRASASGAYESVRVSTRRLLGQEEAPLKTRAEELEEYVCSFCPSLTYKQRLIGFGVCLTLGFILTFGALFRIVRLVAGNPLPFVINYSIGNVISICASFFLNGPWAQIKKMFEPTRVVATGVYITTLGLTFAVALAPRMPLRAPLLVTLVVLQFMSFIWYALSYIPFAREWAAGACRSGRCCGGDSV
Sbjct:    1 MPDLASVSSFIEDRRASASGAYESVRVSTRRLLGQEEAPLKTRAEELEEYVCSFCPSLTYKQRLIGFGVCLTLGFILTFGALFRIVRLVAGNPLPFVINYSIGNVISICASFFLNGPWAQIKKMFEPTRVVATGVYITTLGLTFAVALAPRMPLRAPLLVTLVVLQFMSFIWYALSYIPFAREWAAGACRSGRCCGGDSV 200          
BLAST of jgi.p|Trimin1|354238 vs. uniprot
Match: D8LG13_ECTSI (Vesicle transport protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LG13_ECTSI)

HSP 1 Score: 195 bits (496), Expect = 2.200e-60
Identity = 94/169 (55.62%), Postives = 127/169 (75.15%), Query Frame = 0
Query:   21 AYESVRVSTRRLLGQEEAPLKTRAEELEEYVCSFCPSLTYKQRLIGFGVCLTLGFILTFGALFRIVRLVAGNPLPFVINYSIGNVISICASFFLNGPWAQIKKMFEPTRVVATGVYITTLGLTFAVALAP--RMPLRAPLLVTLVVLQFMSFIWYALSYIPFAREWAAG 187
            A+ES++ S+ RLLG E    K+  +E+EE VCS CPSL+++ RLIG+G CL +GF LTFG+LFR+ +L+ GNP PFV+ +S+G+ ++IC+SFFL GPW QIKKMF P R VAT +Y+ TL  T  VAL+P   +P R  LL+ LVV QF+S++WY LSY+PFAR + AG
Sbjct:    4 AFESMKASSMRLLGGEPEE-KSTLQEMEEAVCSVCPSLSWRNRLIGYGACLAVGFCLTFGSLFRVAQLLTGNPRPFVLYFSLGSALNICSSFFLTGPWKQIKKMFNPVRAVATSIYLATLSATLFVALSPYASVPFRGILLLCLVVAQFLSYVWYTLSYVPFARRFMAG 171          
BLAST of jgi.p|Trimin1|354238 vs. uniprot
Match: F0YE90_AURAN (Vesicle transport protein n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0YE90_AURAN)

HSP 1 Score: 168 bits (426), Expect = 7.910e-50
Identity = 86/169 (50.89%), Postives = 113/169 (66.86%), Query Frame = 0
Query:   28 STRRLLGQEEAPLKTRAEELEEYVCSFCPSLTYKQRLIGFGVCLTLGFILTFGALFRIVRLVAGNPLPFVINYSIGNVISICASFFLNGPWAQIKKMFEPTRVVATGVYITTLGLTFAVALAP-RMPLRAPLLVTLVVLQFMSFIWYALSYIPFAREWAAGACRSGRCC 195
            STR LL  E  P +T AE++EE  C  CP L++KQRLIGF +C  LG ++  G+  RIV LV GNP PF + YS+GNVI+IC+SFFL GP+ Q K M  PTRV+AT  Y+  +G T  VAL   R+P RA L++ LV +Q ++  WY +SYIPFAR++    C+   CC
Sbjct:    3 STRSLLTGEPRP-QTVAEQVEEECCKACPRLSWKQRLIGFSLCFALGVVVELGSFMRIVELVGGNPKPFAVTYSLGNVIAICSSFFLAGPYKQCKSMLAPTRVIATATYLVAIGATLFVALFDARIPARAGLIILLVCVQTIALFWYMISYIPFARDFVKNCCKG--CC 168          
BLAST of jgi.p|Trimin1|354238 vs. uniprot
Match: W7THB3_9STRA (Vesicle transport protein n=3 Tax=Monodopsidaceae TaxID=425072 RepID=W7THB3_9STRA)

HSP 1 Score: 157 bits (396), Expect = 6.540e-45
Identity = 81/164 (49.39%), Postives = 111/164 (67.68%), Query Frame = 0
Query:   28 STRRLLGQEEAPLKTRAEELEEYVCSFCPSLTYKQRLIGFGVCLTLGFILTFGALFRIVRLVAGNPLPFVINYSIGNVISICASFFLNGPWAQIKKMFEPTRVVATGVYITTLGLTFAVALAPRMPLRAPLLVTLVVLQFMSFIWYALSYIPFAREWAAGACRS 191
            S RRLLG E  P KT  E LEE +C +CP+LT++QRL G   C  +G IL FG+ FR  +L+ G+P PF + Y+IGN+IS+  S FL+GP++Q+K MF PTR V T VY+ TL  T  +A +  +P + PLLV ++++QF+S  +Y LSYIPFAR+     C S
Sbjct:   33 SARRLLGVEARP-KTFCERLEEDMCWWCPTLTWQQRLFGCLCCFLVGMILEFGSFFRFTKLLTGHPEPFAVMYTIGNLISLAGSCFLSGPFSQVKSMFHPTRAVCTSVYVLTLVFTLLIAFSD-VPGQGPLLVLMIIVQFLSLSYYILSYIPFARQMVWQTCGS 194          
BLAST of jgi.p|Trimin1|354238 vs. uniprot
Match: A0A7S3MGJ6_9STRA (Vesicle transport protein n=1 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3MGJ6_9STRA)

HSP 1 Score: 147 bits (370), Expect = 4.180e-41
Identity = 71/152 (46.71%), Postives = 105/152 (69.08%), Query Frame = 0
Query:   45 EELEEYVCSFCPSLTYKQRLIGFGVCLTLGFILTFGALFRIVRLVAGNPLPFVINYSIGNVISICASFFLNGPWAQIKKMFEPTRVVATGVYITTLGLTFAVALAPR-MPLRAPLLVTLVVLQFMSFIWYALSYIPFAREWAAGACRSGRCC 195
            E+LEE VCS  P+LTY+QR+IG   CL +GFIL+ G+ FR+++L+ G+P PF   Y+IGN++ + ++ FL GP +Q+K+MF PTR+VAT VY+  +  T  +A  P  +P+R   L+  +  QF++ +WY LSYIPFARE     C++  CC
Sbjct:   29 EDLEEQVCSIFPALTYQQRIIGCLTCLLIGFILSMGSTFRLIKLMEGDPEPFATMYTIGNIVGLFSTCFLYGPVSQVKQMFAPTRLVATAVYLFFMATTLLLAFYPEYIPVRVMWLLISIFFQFLALVWYNLSYIPFAREIMKNMCQT-MCC 179          
BLAST of jgi.p|Trimin1|354238 vs. uniprot
Match: A0A7S3JV88_9STRA (Vesicle transport protein n=1 Tax=Aureoumbra lagunensis TaxID=44058 RepID=A0A7S3JV88_9STRA)

HSP 1 Score: 144 bits (363), Expect = 3.060e-40
Identity = 71/162 (43.83%), Postives = 106/162 (65.43%), Query Frame = 0
Query:   33 LGQEEAPLKTRAEELEEYVCSFCPSLTYKQRLIGFGVCLTLGFILTFGALFRIVRLVAGNPLPFVINYSIGNVISICASFFLNGPWAQIKKMFEPTRVVATGVYITTLGLTFAVALAPRMPL--RAPLLVTLVVLQFMSFIWYALSYIPFAREWAAGACRSG 192
            LG  E   KT AEE E+ +CS CP LTY+QR+ G+  C  + F L+ G+  R+V LV GNP PFV+ Y++GNV++I  S FL+GP AQ KKM++PTR +AT VY+ T+  T  VA    +P   R  +++  + +Q+++ +WY +S+IP+AR++    C  G
Sbjct:    8 LGLAEEKPKTAAEEFEDALCSICPQLTYQQRIGGYIACFFVSFCLSIGSFTRLVELVKGNPAPFVVFYTLGNVMAIIGSLFLSGPRAQCKKMWDPTRRIATSVYLLTIFFTIFVAFYEGIPDDGRIGIIIMCIFIQWIAMLWYTISFIPYARDYVIMICCQG 169          
BLAST of jgi.p|Trimin1|354238 vs. uniprot
Match: A0A7S2XZK4_9STRA (Vesicle transport protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2XZK4_9STRA)

HSP 1 Score: 138 bits (348), Expect = 1.460e-38
Identity = 65/135 (48.15%), Postives = 92/135 (68.15%), Query Frame = 0
Query:   64 LIGFGVCLTLGFILTFGALFRIVRLVAGNPLPFVINYSIGNVISICASFFLNGPWAQIKKMFEPTRVVATGVYITTLGLTFAVALAPRMPLRAPLLVTLVVLQFMSFIWYALSYIPFAREWAAGACRSGRCCGGD 198
            +IG  V L  G +L+ G++FRI++L+ G P+PFV+ YS+GNV+S+C S FL+GPW QIK+MF PTR  AT VY++TL  T  +A  P +P +  +L+ L ++Q ++  WY LSYIP AR +A   C    CC GD
Sbjct:    1 MIGCAVTLGFGLLLSMGSVFRIMQLIRGRPIPFVVFYSLGNVVSLCGSMFLSGPWNQIKRMFAPTRAFATIVYLSTLVTTLTLAFTPGVPFKGGILLILFIVQLLALFWYMLSYIPGARNYAT-KCLKASCCEGD 134          
BLAST of jgi.p|Trimin1|354238 vs. uniprot
Match: A0A7S2IBZ2_9STRA (Vesicle transport protein n=1 Tax=Helicotheca tamesis TaxID=374047 RepID=A0A7S2IBZ2_9STRA)

HSP 1 Score: 139 bits (351), Expect = 4.520e-38
Identity = 77/185 (41.62%), Postives = 120/185 (64.86%), Query Frame = 0
Query:   11 IEDRRASASGAYESVRVSTRRLL-----GQEEAPLKTRAEELEEYVCSFCPSLTYKQRLIGFGVCLTLGFILTFGALFRIVRLVAGNPLPFVINYSIGNVISICASFFLNGPWAQIKKMFEPTRVVATGVYITTLGLTFAVALA-PRMPLRAPLLVTLVVLQFMSFIWYALSYIPFAREWAAGAC 189
            ++D+ AS  G  ++V   +  LL     G+EE   K+  +++EE VC   P+LT +QR+IG   C+  G++L+FG+ FR+  L+ G P+PFV+  ++GN+I++C S FL GP AQ KKMF   R +AT +Y++++  T  VA A  +MP + PLL+ L++ Q++S  WY LSYIPFAR+  +  C
Sbjct:   21 LKDKLASLRGGSDNV--DSESLLQSSATGEEE---KSWQDQIEEEVCELFPALTLQQRVIGCISCMVFGYLLSFGSFFRLAGLLKGKPVPFVVAATLGNIIALCGSCFLTGPAAQTKKMFHDDRRIATIMYLSSVIATLIVAFACHKMPGQGPLLILLMICQYISVTWYCLSYIPFARQMVSQFC 200          
BLAST of jgi.p|Trimin1|354238 vs. uniprot
Match: A0A225V2N0_9STRA (Vesicle transport protein n=3 Tax=Phytophthora TaxID=4783 RepID=A0A225V2N0_9STRA)

HSP 1 Score: 128 bits (322), Expect = 4.440e-34
Identity = 59/136 (43.38%), Postives = 87/136 (63.97%), Query Frame = 0
Query:   55 CPSLTYKQRLIGFGVCLTLGFILTFGALFRIVRLVAGNPLPFVINYSIGNVISICASFFLNGPWAQIKKMFEPTRVVATGVYITTLGLTFAVALAPRMPLRAPLLVTLVVLQFMSFIWYALSYIPFAREWAAGACR 190
            CPSL+Y++R+IG   C  LGF+L+ G+ FR+ +LV GNP PF I Y+IGN++SIC + F  GPW QI+ MF   R  +  VY+  + LT  +     +  R  L++  V++QFM+ +WY LSY+P+ R  A   C+
Sbjct:   34 CPSLSYQERIIGCITCFLLGFLLSLGSTFRLAKLVHGNPAPFAIAYTIGNILSICCTTFFVGPWKQIQTMFHSKRRYSAVVYVVFMFLTLLLCFNHHIHHRLLLVLLSVLVQFMALVWYTLSYVPYGRSIALSCCK 169          
BLAST of jgi.p|Trimin1|354238 vs. uniprot
Match: G4ZDQ4_PHYSP (Vesicle transport protein n=11 Tax=Phytophthora TaxID=4783 RepID=G4ZDQ4_PHYSP)

HSP 1 Score: 128 bits (321), Expect = 7.020e-34
Identity = 62/143 (43.36%), Postives = 94/143 (65.73%), Query Frame = 0
Query:   55 CPSLTYKQRLIGFGVCLTLGFILTFGALFRIVRLVAGNPLPFVINYSIGNVISI-CASFFLNGPWAQIKKMFEPTRVVATGVYITTLGLTFAVALAPRMPLRAPLLVTLVVLQFMSFIWYALSYIPFAREWAAGACRSGRCCG 196
            CPSL+Y++R+IG   C  LGF+L+ G+ FR+ +LV GNP PF I Y+IGNV+SI C +FF+ GPW Q++ MF   R  +  VY+  + +T  +  +P +  R  L++  V++QF++ +WY LSY+P+ R  A   C+  R CG
Sbjct:   38 CPSLSYQERVIGCVTCFMLGFVLSLGSTFRLAKLVHGNPAPFAIAYTIGNVLSIGCTTFFV-GPWKQVQTMFHSKRRYSALVYVVFIFVTLLLCFSPHIHHRMLLVLLSVIVQFLALVWYTLSYVPYGRSIALSCCK--RVCG 177          
The following BLAST results are available for this feature:
BLAST of jgi.p|Trimin1|354238 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A835Z2J1_9STRA2.470e-138100.00Vesicle transport protein n=1 Tax=Tribonema minus ... [more]
D8LG13_ECTSI2.200e-6055.62Vesicle transport protein n=2 Tax=Ectocarpus TaxID... [more]
F0YE90_AURAN7.910e-5050.89Vesicle transport protein n=1 Tax=Aureococcus anop... [more]
W7THB3_9STRA6.540e-4549.39Vesicle transport protein n=3 Tax=Monodopsidaceae ... [more]
A0A7S3MGJ6_9STRA4.180e-4146.71Vesicle transport protein n=1 Tax=Spumella elongat... [more]
A0A7S3JV88_9STRA3.060e-4043.83Vesicle transport protein n=1 Tax=Aureoumbra lagun... [more]
A0A7S2XZK4_9STRA1.460e-3848.15Vesicle transport protein n=1 Tax=Fibrocapsa japon... [more]
A0A7S2IBZ2_9STRA4.520e-3841.62Vesicle transport protein n=1 Tax=Helicotheca tame... [more]
A0A225V2N0_9STRA4.440e-3443.38Vesicle transport protein n=3 Tax=Phytophthora Tax... [more]
G4ZDQ4_PHYSP7.020e-3443.36Vesicle transport protein n=11 Tax=Phytophthora Ta... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR007305Vesicle transport protein, Got1/SFT2-likePFAMPF04178Got1coord: 64..179
e-value: 2.5E-26
score: 92.4
NoneNo IPR availablePANTHERPTHR23137:SF6VESICLE TRANSPORT PROTEINcoord: 43..189
IPR011691Vesicle transport protein SFT2PANTHERPTHR23137UNCHARACTERIZEDcoord: 43..189

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Contig_220contigContig_220:165882..167304 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Tribonema minus UTEX_B_31562021-06-17
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
jgi.p|Trimin1|354238mRNA_17595Tribonema minus UTEX_B_3156 mRNAContig_220 165882..167460 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Trimin1|354238|estExt_Genemark1.C_Ctg_2200020 ID=Trimin1|354238|estExt_Genemark1.C_Ctg_2200020|Name=jgi.p|Trimin1|354238|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=201bp
MPDLASVSSFIEDRRASASGAYESVRVSTRRLLGQEEAPLKTRAEELEEY
VCSFCPSLTYKQRLIGFGVCLTLGFILTFGALFRIVRLVAGNPLPFVINY
SIGNVISICASFFLNGPWAQIKKMFEPTRVVATGVYITTLGLTFAVALAP
RMPLRAPLLVTLVVLQFMSFIWYALSYIPFAREWAAGACRSGRCCGGDSV
*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR007305Vesicle_transpt_Got1/SFT2
IPR011691Vesicle_transpt_SFT2