Trimin1|353946|estExt_Genemark1.C_Ctg_1980026 (polypeptide) Tribonema minus UTEX_B_3156

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
Namejgi.p|Trimin1|353946
Unique NameTrimin1|353946|estExt_Genemark1.C_Ctg_1980026
Typepolypeptide
OrganismTribonema minus UTEX_B_3156 (Tribonema minus UTEX_B_3156 )
Sequence length522
Homology
BLAST of jgi.p|Trimin1|353946 vs. uniprot
Match: A0A835Z3Y8_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z3Y8_9STRA)

HSP 1 Score: 937 bits (2422), Expect = 0.000e+0
Identity = 521/521 (100.00%), Postives = 521/521 (100.00%), Query Frame = 0
Query:    1 MKETEAQLREAKQSHTRKGRYPTELKRRVDALDAKLKLLQSGVFPDEAQRPPKMSEAAALDAARASTVIQAAAISGGAIGSIATFCRVPTHFWAPHVFYRKRGIPPHPPCPKHGWSAVEQGKERDDAESEAIADATTAEARAAASRAAETAHPYNFRSYDPAVTRWYLARYPWVAVEMLVVVCTHNTAMTHELGRLLESMCSAAGTSNPTMIASMLAELKALEFDRTRLAYYSHQDSAPALLTEEEYRLVSPGHGLIRRWFMDLADSKQDFQFAWRQQHISGTVLQVDHHLKAFKGNNVHAVKLGNARCTVFSSNLNCPMLSINTETTGFRDGALRLACNALLRSAHDNGQPPFHLVYSDNPRRDARGIKELLLQTEVGSSELASDASNTLRSGSGAAAAASSGGMSGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAWGSGLDPDAVGADGEGSEELMSREQVAELVGLEAPDRDMHAEGAEELEQVLVAEEMAAVMPVEAALGSRMLAKAKERVGSWS 521
            MKETEAQLREAKQSHTRKGRYPTELKRRVDALDAKLKLLQSGVFPDEAQRPPKMSEAAALDAARASTVIQAAAISGGAIGSIATFCRVPTHFWAPHVFYRKRGIPPHPPCPKHGWSAVEQGKERDDAESEAIADATTAEARAAASRAAETAHPYNFRSYDPAVTRWYLARYPWVAVEMLVVVCTHNTAMTHELGRLLESMCSAAGTSNPTMIASMLAELKALEFDRTRLAYYSHQDSAPALLTEEEYRLVSPGHGLIRRWFMDLADSKQDFQFAWRQQHISGTVLQVDHHLKAFKGNNVHAVKLGNARCTVFSSNLNCPMLSINTETTGFRDGALRLACNALLRSAHDNGQPPFHLVYSDNPRRDARGIKELLLQTEVGSSELASDASNTLRSGSGAAAAASSGGMSGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAWGSGLDPDAVGADGEGSEELMSREQVAELVGLEAPDRDMHAEGAEELEQVLVAEEMAAVMPVEAALGSRMLAKAKERVGSWS
Sbjct:    1 MKETEAQLREAKQSHTRKGRYPTELKRRVDALDAKLKLLQSGVFPDEAQRPPKMSEAAALDAARASTVIQAAAISGGAIGSIATFCRVPTHFWAPHVFYRKRGIPPHPPCPKHGWSAVEQGKERDDAESEAIADATTAEARAAASRAAETAHPYNFRSYDPAVTRWYLARYPWVAVEMLVVVCTHNTAMTHELGRLLESMCSAAGTSNPTMIASMLAELKALEFDRTRLAYYSHQDSAPALLTEEEYRLVSPGHGLIRRWFMDLADSKQDFQFAWRQQHISGTVLQVDHHLKAFKGNNVHAVKLGNARCTVFSSNLNCPMLSINTETTGFRDGALRLACNALLRSAHDNGQPPFHLVYSDNPRRDARGIKELLLQTEVGSSELASDASNTLRSGSGAAAAASSGGMSGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAWGSGLDPDAVGADGEGSEELMSREQVAELVGLEAPDRDMHAEGAEELEQVLVAEEMAAVMPVEAALGSRMLAKAKERVGSWS 521          
BLAST of jgi.p|Trimin1|353946 vs. uniprot
Match: A0A835Z982_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z982_9STRA)

HSP 1 Score: 147 bits (372), Expect = 1.810e-36
Identity = 77/167 (46.11%), Postives = 100/167 (59.88%), Query Frame = 0
Query:  178 MLVVVCTHNTAMTHELGRLLESMCSAAGTSNPTMIASMLAELKALEFDRTRLAYYSHQD------------------------------------SAPALLTEEEYRLVSPGHGLIRRWFMDLADSKQDFQFAWRQQHISGTVLQVDHHLKAFKGNNVHAVKLGNAR 308
            M V +C+HNTAMT +L RL++SM S +G+ NP M+A MLAELKAL FD  R+AYY +Q                                       P LLT + Y L S GHGLIRRWFM+LA+S Q+FQ  WRQQ+++ TVL+ DH LK ++G+NV +VK+GN R
Sbjct:    1 MPVRICSHNTAMTQQLARLIKSMRSVSGSCNPMMVAKMLAELKALHFDNARIAYYGYQAYNAGKQRRGNGQLSFEQSFARGSSCDAPTAPHQQQCEGPVLLTVQLYGLASSGHGLIRRWFMNLAESNQNFQILWRQQNVTATVLEADHTLKTYRGSNVQSVKVGNNR 167          
BLAST of jgi.p|Trimin1|353946 vs. uniprot
Match: A0A835Z5P5_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z5P5_9STRA)

HSP 1 Score: 89.0 bits (219), Expect = 3.080e-15
Identity = 46/70 (65.71%), Postives = 61/70 (87.14%), Query Frame = 0
Query:    1 MKETEAQLREAKQSHTRKGRYPTELKRRVDALDAKLKLLQSGVFPDEAQRPPKMSEAAALDAARASTVIQ 70
            +K+T+AQL+EAK+ + R+GRYP E   +V+ALDA+LKLL+SGV P+EAQ PPK+SEAAAL+AARAS V+Q
Sbjct:   15 IKQTQAQLQEAKEENKRRGRYPKEKAAKVNALDAELKLLRSGVLPEEAQPPPKVSEAAALEAARASAVVQ 84          
BLAST of jgi.p|Trimin1|353946 vs. uniprot
Match: A0A836CGN3_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CGN3_9STRA)

HSP 1 Score: 77.4 bits (189), Expect = 5.240e-13
Identity = 40/61 (65.57%), Postives = 52/61 (85.25%), Query Frame = 0
Query:    1 MKETEAQLREAKQSHTRKGRYPTELKRRVDALDAKLKLLQSGVFPDEAQRPPKMSEAAALD 61
            +K TEAQL+EAK+ + R+GRYP E   +V+ALDA+LKLLQSGV P+EA+ PPK+SEAAAL+
Sbjct:   29 IKLTEAQLQEAKEENKRRGRYPREKAAKVNALDAELKLLQSGVLPEEARAPPKVSEAAALE 89          
The following BLAST results are available for this feature:
BLAST of jgi.p|Trimin1|353946 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 4
Match NameE-valueIdentityDescription
A0A835Z3Y8_9STRA0.000e+0100.00Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A835Z982_9STRA1.810e-3646.11Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A835Z5P5_9STRA3.080e-1565.71Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A836CGN3_9STRA5.240e-1365.57Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 429..464
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..24

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Contig_198contigContig_198:146090..149486 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Tribonema minus UTEX_B_31562021-06-17
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
jgi.p|Trimin1|353946mRNA_16038Tribonema minus UTEX_B_3156 mRNAContig_198 146090..149493 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Trimin1|353946|estExt_Genemark1.C_Ctg_1980026 ID=Trimin1|353946|estExt_Genemark1.C_Ctg_1980026|Name=jgi.p|Trimin1|353946|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=522bp
MKETEAQLREAKQSHTRKGRYPTELKRRVDALDAKLKLLQSGVFPDEAQR
PPKMSEAAALDAARASTVIQAAAISGGAIGSIATFCRVPTHFWAPHVFYR
KRGIPPHPPCPKHGWSAVEQGKERDDAESEAIADATTAEARAAASRAAET
AHPYNFRSYDPAVTRWYLARYPWVAVEMLVVVCTHNTAMTHELGRLLESM
CSAAGTSNPTMIASMLAELKALEFDRTRLAYYSHQDSAPALLTEEEYRLV
SPGHGLIRRWFMDLADSKQDFQFAWRQQHISGTVLQVDHHLKAFKGNNVH
AVKLGNARCTVFSSNLNCPMLSINTETTGFRDGALRLACNALLRSAHDNG
QPPFHLVYSDNPRRDARGIKELLLQTEVGSSELASDASNTLRSGSGAAAA
ASSGGMSGAGAGHSGEAAGAAASSGANESGSGAGSTAGAWGSGLDPDAVG
ADGEGSEELMSREQVAELVGLEAPDRDMHAEGAEELEQVLVAEEMAAVMP
VEAALGSRMLAKAKERVGSWS*
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