Trimin1|353910|estExt_Genemark1.C_Ctg_1950009 (polypeptide) Tribonema minus UTEX_B_3156

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
Namejgi.p|Trimin1|353910
Unique NameTrimin1|353910|estExt_Genemark1.C_Ctg_1950009
Typepolypeptide
OrganismTribonema minus UTEX_B_3156 (Tribonema minus UTEX_B_3156 )
Sequence length245
Homology
BLAST of jgi.p|Trimin1|353910 vs. uniprot
Match: A0A835Z4I5_9STRA (Peptidase_M23 domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z4I5_9STRA)

HSP 1 Score: 423 bits (1088), Expect = 9.130e-149
Identity = 244/244 (100.00%), Postives = 244/244 (100.00%), Query Frame = 0
Query:    1 MEAFKARYYHLAAGSACVWVGQRVEAGDIIARSGNTGYSSTPHLHFDVVDLLPERCCTLRVRPFHAGTATAPDAPTAVAAVAAARLQFPAVPAVFSGAITDIPASATLVDFDSWQQSAXXXXXXXXXXXXXXXXXXLDRRGFQVNAVIVANTAAGPELFQMAGKSERMAVPIALISKEDGESVRSLLSRCAAEAALVPEDGELASKVPRLTAAGSSSALIYQAVTQQVHFDSASMPATACCSVM 244
            MEAFKARYYHLAAGSACVWVGQRVEAGDIIARSGNTGYSSTPHLHFDVVDLLPERCCTLRVRPFHAGTATAPDAPTAVAAVAAARLQFPAVPAVFSGAITDIPASATLVDFDSWQQSAXXXXXXXXXXXXXXXXXXLDRRGFQVNAVIVANTAAGPELFQMAGKSERMAVPIALISKEDGESVRSLLSRCAAEAALVPEDGELASKVPRLTAAGSSSALIYQAVTQQVHFDSASMPATACCSVM
Sbjct:    1 MEAFKARYYHLAAGSACVWVGQRVEAGDIIARSGNTGYSSTPHLHFDVVDLLPERCCTLRVRPFHAGTATAPDAPTAVAAVAAARLQFPAVPAVFSGAITDIPASATLVDFDSWQQSAXXXXXXXXXXXXXXXXXXLDRRGFQVNAVIVANTAAGPELFQMAGKSERMAVPIALISKEDGESVRSLLSRCAAEAALVPEDGELASKVPRLTAAGSSSALIYQAVTQQVHFDSASMPATACCSVM 244          
BLAST of jgi.p|Trimin1|353910 vs. uniprot
Match: A0A7S3K4G7_9STRA (Hypothetical protein n=1 Tax=Aureoumbra lagunensis TaxID=44058 RepID=A0A7S3K4G7_9STRA)

HSP 1 Score: 89.7 bits (221), Expect = 5.310e-17
Identity = 67/184 (36.41%), Postives = 90/184 (48.91%), Query Frame = 0
Query:    7 RYYHLAAGSACVWVGQRVEAGDIIARSGNTGYSSTPHLHFDVVDLLPERCCTLRVRPFHAGTATAPDAPTAVAAVAAARL-QFPAVPAVFSGAI--TDIPASATLVDFDSWQQSAXXXXXXXXXXXXXXXXXXLDRRGFQVNAVIVANTAAGPELFQMAGKSERMAVPIALISKEDGESVRSLL 187
            RYYHL    + + VG RV+ G +IA SGNTGY+  PHLHFDVV++LPE    L     H   ++     T ++A+AAA   + P VP +    +   D+P    L + +   +                    L   G     VIVAN+  GPELF M G  E  AVP  LISKE G  ++ +L
Sbjct:  112 RYYHLRKDGSKLKVGDRVKRGQVIALSGNTGYTGGPHLHFDVVNVLPEETAIL-----HYSLSSNDTNITKISAIAAAFCCELPHVPKIARLRLFPNDVPWKCVLSEKEKLAEPFFALADRDTSQSFAQRIAALAELG--AAGVIVANSRNGPELFAMGGCEEPSAVPGVLISKESGNQLKKIL 288          
BLAST of jgi.p|Trimin1|353910 vs. uniprot
Match: A0A7S2C303_9STRA (Hypothetical protein n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2C303_9STRA)

HSP 1 Score: 86.3 bits (212), Expect = 6.180e-16
Identity = 68/189 (35.98%), Postives = 91/189 (48.15%), Query Frame = 0
Query:    6 ARYYHLAAGSACVWVGQRVEAGDIIARSGNTGYSSTPHLHFDVVDLLPERCCTLRV-RPFHAGTATAPDAPTAVAAVAAARLQFP----AVPAVFSGAITDIPASATLVDFDSWQQSAXXXXXXXXXXXXXXXXXXLDRRGFQVNA--VIVANTAAGPELFQMAGKSERMAVPIALISKEDGESVRSLL 187
            ARY+HL      V  G  V+AG  +  SGNTG+SSTPHLHFDVVD+LPE  C L+V  P +  T       T  A +AA    FP     VPA    A     ASA L + D  + +                     RR  +  A  +IV N   GPELF M G  + +++P  L++ E G+ +R ++
Sbjct:  120 ARYFHLRRQGVTVEAGDTVKAGQQVGLSGNTGFSSTPHLHFDVVDMLPEDTCVLKVVDPENVDTPIL----TLPAVIAAFSALFPRHAATVPAKLVRA-EPADASADLTNIDKVRGNVVLIERGGCSFTTKA------RRAEEAGAASMIVVNNNKGPELFSMGGTEKPISIPAVLVASEAGDLLRDIV 297          
BLAST of jgi.p|Trimin1|353910 vs. uniprot
Match: A0A8J2WE38_9STRA (Hypothetical protein n=2 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A8J2WE38_9STRA)

HSP 1 Score: 80.5 bits (197), Expect = 8.570e-14
Identity = 67/185 (36.22%), Postives = 86/185 (46.49%), Query Frame = 0
Query:    6 ARYYHLAAGSACVWVGQRVEAGDIIARSGNTGYSSTPHLHFDVVDLLPERCCTLR-VRPFHAGTATAPDAPTAVAAVAAA-RLQFPAVPAVFSGAITDIPASATLVDFDSWQQSAXXXXXXXXXXXXXXXXXXLDRRGFQVNAVIVANTAAGPELFQMAGKSERMAVPIALISKEDGESVRSLLS 188
            ARYYHL    +   VG+RV  G  IA SGNTGY+  PHLHFD+V+LLPE   TLR V P H            + +VAAA   + P+ P      +  +P  A   D    +                     L  +G    A I++N  +GPELF M G      VP  LISKE G  ++S L+
Sbjct:  129 ARYYHLKEKGSLYKVGERVGRGQQIAWSGNTGYTGGPHLHFDLVNLLPEETSTLRIVSPKHCRKR--------LQSVAAAFSCELPSTP--LRCKVVHVPNDAVAGDGLRIEGPWIALSDRDPASTFSEKISFLAEQG--ACAAIISNNRSGPELFAMGGCETASPVPACLISKEHGIMLKSYLA 301          
BLAST of jgi.p|Trimin1|353910 vs. uniprot
Match: A0A6H5LL89_9PHAE (Peptidase_M23 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5LL89_9PHAE)

HSP 1 Score: 75.9 bits (185), Expect = 3.560e-12
Identity = 78/192 (40.62%), Postives = 101/192 (52.60%), Query Frame = 0
Query:    7 RYYHLAAGSACVWVGQRVEAGDIIARSGNTGYSSTPHLHFDVVDLLPERCCTLRVRPFHAGTATAPDAPTAVAAVAAARLQFPAVPAVFSGAITD-----IPASATLVDFDSWQQSAXXXXXXXXXXXXXXXXXXLDRRGF-QVNAVIVANTAAGPELFQMAGKS-----ERMAVPIALISKEDGESVRSLL 187
            RY HL  G   V VGQ V AG++IA SGNTGYS TPHLHFD V +LP+    L +                   V  + L  P+V A+FSG +         A  T V+  +     XXXXXXXXXXXXXXXXXX    G+ +   V+VAN   G E+F MA  +      R   P+ ++S+E GE +++ L
Sbjct:   77 RYVHLMRGGVLVQVGQEVAAGEVIALSGNTGYSPTPHLHFDAVKVLPQETSELWI-------------------VHPSVLPLPSVAAIFSGPLNREVEDFTTAPMTFVEAAATAXXXXXXXXXXXXXXXXXXXXXXXXXGYCRCVGVVVANDRPGHEVFPMASSACGEEGMRAPFPVVMVSRESGELLKTAL 249          
BLAST of jgi.p|Trimin1|353910 vs. uniprot
Match: F0Y178_AURAN (Uncharacterized protein n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0Y178_AURAN)

HSP 1 Score: 75.1 bits (183), Expect = 6.540e-12
Identity = 67/211 (31.75%), Postives = 88/211 (41.71%), Query Frame = 0
Query:    6 ARYYHLAAGSACVWVGQRVEAGDIIARSGNTGYSSTPHLHFDVVDLLPERCCTLRVRPFHAGTATAPDAPTAVAAVAAARLQFPAVPAVFSGAITDIPASATLVDFDSWQQSAXXXXXXXXXXXXXXXXXX----------------------------LDRRGFQVNAVIVANTAAGPELFQMAGKSERMAVPIALISKEDGESVRSLLS 188
            ARYYHL    +   VG  VEAG  IA SGNTGY+  PHLH DVV+LLPE    LRV                V   + ARL  P+V A FS  +    + A ++ +++ Q  +                                              L +RG    A IVAN  +GPE+F M G     A+P  L+SKE G  ++  L+
Sbjct:  132 ARYYHLRTDGSLFKVGDSVEAGQHIAFSGNTGYTGGPHLHLDVVNLLPEETSRLRV----------------VEPKSLARL-VPSVAAAFSCLLPREGSMACVLRYEAAQSESAHPSREEEKNAPAPSSKKRPANFFVAFRVALADRDPACSFAQKVDQLAKRG--AVAAIVANNRSGPEVFAMGGCERPSAIPCVLVSKEHGAWLKQALA 323          
BLAST of jgi.p|Trimin1|353910 vs. uniprot
Match: A0A7S2HAX5_9STRA (Hypothetical protein (Fragment) n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2HAX5_9STRA)

HSP 1 Score: 66.6 bits (161), Expect = 1.900e-10
Identity = 38/76 (50.00%), Postives = 46/76 (60.53%), Query Frame = 0
Query:    6 ARYYHLAAGSACVWVGQRVEAGDIIARSGNTGYSSTPHLHFDVVDLLPERCCTLRVRPFHA-GTATAPDAPTAVAA 80
            ARY+HL        VG +V AG  +A SGNTG+SS PHLHFDV ++LPE  C L +R   A G   + D   AVAA
Sbjct:   40 ARYFHLQKNGCSAKVGDQVIAGQQVALSGNTGFSSCPHLHFDVTNMLPEDTCHLDIRSREADGAVVSMDTVPAVAA 115          
BLAST of jgi.p|Trimin1|353910 vs. uniprot
Match: A0A7S4BTM6_CHRCT (Hypothetical protein n=1 Tax=Chrysotila carterae TaxID=13221 RepID=A0A7S4BTM6_CHRCT)

HSP 1 Score: 69.7 bits (169), Expect = 4.560e-10
Identity = 35/62 (56.45%), Postives = 40/62 (64.52%), Query Frame = 0
Query:    2 EAFKARYYHLAAGSACVWVGQRVEAGDIIARSGNTGYSSTPHLHFDVVDLLPERCCTLRVRP 63
            +   +RYYHL   SA V  GQRV AG  IA SGNTG+SS PHLHFDVVD+     C  R+ P
Sbjct:  109 DGLYSRYYHLQPSSALVCKGQRVTAGQRIAASGNTGFSSGPHLHFDVVDVFNLETCLFRLLP 170          
BLAST of jgi.p|Trimin1|353910 vs. uniprot
Match: A0A7S3BY81_9EUKA (Hypothetical protein (Fragment) n=1 Tax=Haptolina ericina TaxID=156174 RepID=A0A7S3BY81_9EUKA)

HSP 1 Score: 60.8 bits (146), Expect = 3.090e-7
Identity = 32/59 (54.24%), Postives = 37/59 (62.71%), Query Frame = 0
Query:    1 MEAFKARYYHLAAGSACVWVGQRVEAGDIIARSGNTGYSSTPHLHFDVVDLLPERCCTL 59
            ++   +RYYHL   S  V  GQ V  G  IARSGNTGYS+ PHLHFDVVD L     +L
Sbjct:   68 VDGLYSRYYHLQHRSLMVSEGQIVVTGQPIARSGNTGYSAAPHLHFDVVDRLSTEFASL 126          
BLAST of jgi.p|Trimin1|353910 vs. uniprot
Match: A0A2R5G9Q3_9STRA (Murein hydrolase activator NlpD n=1 Tax=Hondaea fermentalgiana TaxID=2315210 RepID=A0A2R5G9Q3_9STRA)

HSP 1 Score: 59.3 bits (142), Expect = 1.260e-6
Identity = 32/58 (55.17%), Postives = 36/58 (62.07%), Query Frame = 0
Query:    7 RYYHLAAGSACVWVGQRVEAGDIIARSGNTGYSSTPHLHFDVVDLLPER----CCTLR 60
            RY+HL A S  V  GQ V  GDI+A+SG TGY   PHLHFDV DL  +     CC LR
Sbjct:   94 RYFHLQARSIVVEKGQYVALGDILAKSGATGYVGGPHLHFDVTDLYIKETSRLCCFLR 151          
The following BLAST results are available for this feature:
BLAST of jgi.p|Trimin1|353910 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A835Z4I5_9STRA9.130e-149100.00Peptidase_M23 domain-containing protein n=1 Tax=Tr... [more]
A0A7S3K4G7_9STRA5.310e-1736.41Hypothetical protein n=1 Tax=Aureoumbra lagunensis... [more]
A0A7S2C303_9STRA6.180e-1635.98Hypothetical protein n=1 Tax=Florenciella parvula ... [more]
A0A8J2WE38_9STRA8.570e-1436.22Hypothetical protein n=2 Tax=Pelagomonas calceolat... [more]
A0A6H5LL89_9PHAE3.560e-1240.63Peptidase_M23 domain-containing protein n=1 Tax=Ec... [more]
F0Y178_AURAN6.540e-1231.75Uncharacterized protein n=1 Tax=Aureococcus anopha... [more]
A0A7S2HAX5_9STRA1.900e-1050.00Hypothetical protein (Fragment) n=1 Tax=Dictyocha ... [more]
A0A7S4BTM6_CHRCT4.560e-1056.45Hypothetical protein n=1 Tax=Chrysotila carterae T... [more]
A0A7S3BY81_9EUKA3.090e-754.24Hypothetical protein (Fragment) n=1 Tax=Haptolina ... [more]
A0A2R5G9Q3_9STRA1.260e-655.17Murein hydrolase activator NlpD n=1 Tax=Hondaea fe... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR011055Duplicated hybrid motifGENE3D2.70.70.10Glucose Permease (Domain IIA)coord: 2..58
e-value: 1.6E-14
score: 55.9
IPR011055Duplicated hybrid motifSUPERFAMILY51261Duplicated hybrid motifcoord: 5..48
IPR016047Peptidase M23PFAMPF01551Peptidase_M23coord: 5..48
e-value: 2.7E-9
score: 37.1

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Contig_195contigContig_195:116006..119148 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Tribonema minus UTEX_B_31562021-06-17
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
jgi.p|Trimin1|353910mRNA_17269Tribonema minus UTEX_B_3156 mRNAContig_195 116006..119148 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Trimin1|353910|estExt_Genemark1.C_Ctg_1950009 ID=Trimin1|353910|estExt_Genemark1.C_Ctg_1950009|Name=jgi.p|Trimin1|353910|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=245bp
MEAFKARYYHLAAGSACVWVGQRVEAGDIIARSGNTGYSSTPHLHFDVVD
LLPERCCTLRVRPFHAGTATAPDAPTAVAAVAAARLQFPAVPAVFSGAIT
DIPASATLVDFDSWQQSAAAPAAAADGGGSGGVVLLLDRRGFQVNAVIVA
NTAAGPELFQMAGKSERMAVPIALISKEDGESVRSLLSRCAAEAALVPED
GELASKVPRLTAAGSSSALIYQAVTQQVHFDSASMPATACCSVM*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR011055Dup_hybrid_motif
IPR016047Peptidase_M23