Trimin1|353900|estExt_Genemark1.C_Ctg_1940020 (polypeptide) Tribonema minus UTEX_B_3156

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
Namejgi.p|Trimin1|353900
Unique NameTrimin1|353900|estExt_Genemark1.C_Ctg_1940020
Typepolypeptide
OrganismTribonema minus UTEX_B_3156 (Tribonema minus UTEX_B_3156 )
Sequence length195
Homology
BLAST of jgi.p|Trimin1|353900 vs. uniprot
Match: A0A835Z5Y5_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z5Y5_9STRA)

HSP 1 Score: 382 bits (980), Expect = 5.860e-134
Identity = 194/194 (100.00%), Postives = 194/194 (100.00%), Query Frame = 0
Query:    1 MEEERIRVPAPAGSSTQQEIVRMVFTSMARRRLLPKKYWSLSRLLHDTVAPMIKVHLVADSTNSVILHRLLEGTSRRRIRRLTLDGDFTSTQQRPLSLPPSLVRLELNGFRARWPVQLERLVYWAIGVSGDAPEPCIDRPLPPKLTELELNGCSIATHLPRMLQKLKLGRSFSQELCLTGSLIATVNSSKYSYD 194
            MEEERIRVPAPAGSSTQQEIVRMVFTSMARRRLLPKKYWSLSRLLHDTVAPMIKVHLVADSTNSVILHRLLEGTSRRRIRRLTLDGDFTSTQQRPLSLPPSLVRLELNGFRARWPVQLERLVYWAIGVSGDAPEPCIDRPLPPKLTELELNGCSIATHLPRMLQKLKLGRSFSQELCLTGSLIATVNSSKYSYD
Sbjct:    1 MEEERIRVPAPAGSSTQQEIVRMVFTSMARRRLLPKKYWSLSRLLHDTVAPMIKVHLVADSTNSVILHRLLEGTSRRRIRRLTLDGDFTSTQQRPLSLPPSLVRLELNGFRARWPVQLERLVYWAIGVSGDAPEPCIDRPLPPKLTELELNGCSIATHLPRMLQKLKLGRSFSQELCLTGSLIATVNSSKYSYD 194          
BLAST of jgi.p|Trimin1|353900 vs. uniprot
Match: A0A835ZHU4_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZHU4_9STRA)

HSP 1 Score: 213 bits (541), Expect = 6.090e-65
Identity = 149/359 (41.50%), Postives = 162/359 (45.13%), Query Frame = 0
Query:    1 MEEERIRVPAPAGSSTQQEIVRMVFTSMARRRLLPKKYWSLSRLLHDTVAPMIKVHLVADSTNSVILHRLLEGTSRRRIRRLTLDGDFTSTQQRPL---------------------------------------------------------------------------------------------------SLPPSLVRLELNGFR----------------------------------------------------------------ARWPVQLERLVYWAIGVS--GDAPEPCIDRPLPPKLTELELNGCSIATHLPRMLQKLKLGRSFSQELCLTGSLIATVNSSKYSYD 194
            MEEERIRVPAPAGS +QQEIV MVFTSMA RRLLPKK WSLSRLLHDTVAP+IKVHLVADS N+  LHRLLE TSRR ++RLTLDGDFTS QQRPL                                                                                                   SLP SL  L+L GF+                                                                ARWP  LERLV WA+G S   DAPEPCIDRPLPP LT+LELNGCSIAT LP+ LQ L+LGR FSQEL L GS   TVN  +Y Y+
Sbjct:    1 MEEERIRVPAPAGSLSQQEIVMMVFTSMAGRRLLPKKCWSLSRLLHDTVAPIIKVHLVADSINAATLHRLLEDTSRRNVQRLTLDGDFTSMQQRPLNLVPLLSPAVAQVDVAFCSFSGSIEDVLTIPSLPEGVASLSVTAGFSRDVVWAFSKLPQSLRHLIVDATTDVIVFEQPLPTLLESFIVESGGEVHVGAGSLPASLRNLQLWGFQQLYELPPRLRVLMLQRYIYPLPLLPDTLETLVLDYCTHHVSNLPDSVRSLALYWHPAQPAPPLPARWPAHLERLVDWAVGESEPDDAPEPCIDRPLPPTLTQLELNGCSIATDLPQTLQTLRLGRGFSQELDLAGSFKVTVNGRRYCYE 359          
BLAST of jgi.p|Trimin1|353900 vs. uniprot
Match: A0A835YUX2_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YUX2_9STRA)

HSP 1 Score: 169 bits (429), Expect = 3.360e-49
Identity = 112/270 (41.48%), Postives = 137/270 (50.74%), Query Frame = 0
Query:    4 ERIRVPAPAGSSTQQEIVRMVFTSMARRRLLPKKYWSLSRLLHDTVAPMIKVH-----LVADSTNSVILHRLLEGTSRRRIRRLTLDGDFTSTQQRPLSLPPSLVRLELNGFRA---------------------------------------------------------------------------RWPVQLERLVYWAIGVSGDAPEPCIDRPLPPKLTELELNGCSIATHLPRMLQKLKLGRSFSQELCLTGSLIATVNSSKYSY 193
            ER   PAP G +  Q+++RMVFTSMA RRLLPK+ W L+R + DT AP + VH     L ADST+  ILH LLE ++RR + +LT++GDFTS Q+RPLSLPPSLV L LNGFR                                                                            RWP  LERL+YWA   S  AP P I R LPP L EL LNGC +   LPR LQK++LGR+F+Q+L  TG +  TVNS+   Y
Sbjct:    2 ERAPPPAPTGLANYQDMMRMVFTSMAGRRLLPKEGWGLNRAIRDTAAPTVSVHVKRAPLKADSTSCTILHGLLEDSARRLVVKLTMEGDFTSVQERPLSLPPSLVSLYLNGFRGLRELDLVAFPQLDELPPGLRFLKLRNHDHPLPPLXXXXXXXXXXXXXXXXXXXXXXXRSLSLYWLPPNPAPPLPTRWPAHLERLMYWA--KSDGAPMPVIKR-LPPTLRELALNGCEVHASLPRTLQKVRLGRNFTQQLTFTGRV--TVNSNDNWY 266          
BLAST of jgi.p|Trimin1|353900 vs. uniprot
Match: A0A835Z4J5_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z4J5_9STRA)

HSP 1 Score: 173 bits (438), Expect = 2.990e-48
Identity = 92/111 (82.88%), Postives = 97/111 (87.39%), Query Frame = 0
Query:    1 MEEERIRVPAPAGSSTQQEIVRMVFTSMARRRLLPKKYWSLSRLLHDTVAPMIKVHLVADSTNSVILHRLLEGTSRRRIRRLTLDGDFTSTQQRPLSLPPSLVRLELNGFR 111
            ME ERIRVPAPA S +QQEIVRMVFTSMA RRLLPK+ WSLS LLHDTVAP I+VH VADS +S +LHRLLE TSRRRIR LTLDGDFTS QQRPLSLPPSL RLELNGFR
Sbjct:    1 MEVERIRVPAPASSLSQQEIVRMVFTSMAGRRLLPKECWSLSSLLHDTVAPTIEVHPVADSADSAVLHRLLEDTSRRRIRCLTLDGDFTSIQQRPLSLPPSLERLELNGFR 111          
BLAST of jgi.p|Trimin1|353900 vs. uniprot
Match: A0A836CJI5_9STRA (WD40-repeat-containing domain protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CJI5_9STRA)

HSP 1 Score: 149 bits (376), Expect = 3.060e-38
Identity = 84/146 (57.53%), Postives = 97/146 (66.44%), Query Frame = 0
Query:   24 VFTSMARRRLLPKKYWSLSRLLHDTVAPMIKVHLVAD-STNSVILHRLLEGTSRRRIRRLTLDGDFTSTQQRPLSLPPSLVRLELNGFRARWPVQLERLVYWAIGVSGDAPEPCIDRP-LPPKLTELELNGCSIATHLPRMLQKLK 167
            VFT MA R LLPK  WSLSR +HDT AP ++V LV D +    + H LLE  +RR I  L+LDG F  T +RPLSLPP LVRLEL  F+ARWP  LERLVYWA     DAP P +D   LP  L  LELNGCS+ T +PR LQ L+
Sbjct:    4 VFTIMAGRSLLPKAGWSLSRAMHDTAAPTVRVALVDDINRRFAVPHHLLEDRTRRSIVELSLDGLFDDTHERPLSLPPGLVRLELKAFQARWPPHLERLVYWAKSEPEDAP-PFLDTDRLPSTLKRLELNGCSVCTRVPRTLQTLR 148          
BLAST of jgi.p|Trimin1|353900 vs. uniprot
Match: A0A836CCC0_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CCC0_9STRA)

HSP 1 Score: 127 bits (319), Expect = 5.190e-31
Identity = 64/105 (60.95%), Postives = 74/105 (70.48%), Query Frame = 0
Query:   10 APAGSSTQQEIVRMVFTSMARRRLLPKKYWSLSRLLHDTVAPMIKVHLVADSTNSVILHRLLEGTSRRRIRRLTLDGDFTSTQQRPLSLPPSLVRLELNGFRARW 114
            AP   +   EI+R VFTSMA RRLLPK+ WSL+R +HDT AP ++VHLVA S +  I H LLEG  RR I  LT++GDFT  Q  PLSLPPSLVRL L GFR  W
Sbjct:  215 APTAPANHHEIMRRVFTSMAGRRLLPKESWSLNRAIHDTAAPTVEVHLVAGSASPAIAHCLLEGIVRRLIVNLTMEGDFTKIQAHPLSLPPSLVRLSLRGFRVHW 319          
BLAST of jgi.p|Trimin1|353900 vs. uniprot
Match: A0A835YM31_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YM31_9STRA)

HSP 1 Score: 127 bits (320), Expect = 9.710e-31
Identity = 65/108 (60.19%), Postives = 83/108 (76.85%), Query Frame = 0
Query:    4 ERIRVPAPAGSSTQQEIVRMVFTSMARRRLLPKKYWSLSRLLHDTVAPMIKVHLVADSTNSVILHRLLEGTSRRRIRRLTLDGDFTSTQQRPLSLPPSLVRLELNGFR 111
            +R R PAPA  S+  +I+RMV  +MA RRLLPK+ WSLSR +HD+ AP ++V LVADS    I HRLL+ T+RR + +LT++GDF+S Q RPLSLP SLVRLEL+GFR
Sbjct:  167 DRARHPAPAAPSSHDDILRMVLLNMAGRRLLPKEAWSLSRSVHDSAAPTVQVRLVADSAAFAIPHRLLDDTARRLVVKLTMEGDFSSIQDRPLSLPASLVRLELHGFR 274          
BLAST of jgi.p|Trimin1|353900 vs. uniprot
Match: A0A835YW32_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YW32_9STRA)

HSP 1 Score: 119 bits (298), Expect = 1.430e-30
Identity = 58/84 (69.05%), Postives = 67/84 (79.76%), Query Frame = 0
Query:   28 MARRRLLPKKYWSLSRLLHDTVAPMIKVHLVADSTNSVILHRLLEGTSRRRIRRLTLDGDFTSTQQRPLSLPPSLVRLELNGFR 111
            MA RRLLPK  WSL+R +HDT AP +KV L ADS    I HR+LE ++RR + RLT+DGDFTS Q+RPLSLPPSLVRLELNGFR
Sbjct:    1 MAGRRLLPKNCWSLNRAIHDTAAPTVKVRLEADSATCAIFHRILEDSARRLVVRLTMDGDFTSIQERPLSLPPSLVRLELNGFR 84          
BLAST of jgi.p|Trimin1|353900 vs. uniprot
Match: A0A835YUY3_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YUY3_9STRA)

HSP 1 Score: 119 bits (299), Expect = 2.760e-29
Identity = 66/130 (50.77%), Postives = 84/130 (64.62%), Query Frame = 0
Query:    5 RIRVPAPAGSSTQQEIVRMVFTSMARRRLLPKKYWSLSRLLHDTVAPMIKVHLVADSTNSVILHRLLEGTSRRRIRRLTLDGDFTSTQQRPLSLPPSLVRLELNGFRARW---PVQLERLVYWAIGVSGD 131
            R+ +    G  + Q+I+R+VFTSMA RRLLP++ WSLSR +HDT AP++KV L A      + H LLE T+R+ I  LT++GDFT  Q RPLSLPPSLV+LEL GFR      P  L +L   A    GD
Sbjct:   73 RLELAGFTGDRSHQDIIRIVFTSMAGRRLLPEEGWSLSRAIHDTAAPIVKVRLEAGGVPIAMAHHLLEDTARKLIVELTMEGDFTEIQARPLSLPPSLVQLELAGFRGELGPAPSGLRKLSLCAYCEDGD 202          
BLAST of jgi.p|Trimin1|353900 vs. uniprot
Match: A0A835YTI8_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YTI8_9STRA)

HSP 1 Score: 118 bits (295), Expect = 2.840e-28
Identity = 60/91 (65.93%), Postives = 71/91 (78.02%), Query Frame = 0
Query:   21 VRMVFTSMARRRLLPKKYWSLSRLLHDTVAPMIKVHLVADSTNSVILHRLLEGTSRRRIRRLTLDGDFTSTQQRPLSLPPSLVRLELNGFR 111
            +R VFTSMA RRLLPK+ WSL+R++HDT AP +K  + AD+    I HRLLE TSRR I  L ++GDFT  Q+RPLSLPPSLVRLELNGFR
Sbjct:    1 MRRVFTSMAGRRLLPKEGWSLNRVIHDTAAPTVKARVEADTVLFAIQHRLLEDTSRRFILDLIMEGDFTRIQERPLSLPPSLVRLELNGFR 91          
The following BLAST results are available for this feature:
BLAST of jgi.p|Trimin1|353900 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 18
Match NameE-valueIdentityDescription
A0A835Z5Y5_9STRA5.860e-134100.00Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A835ZHU4_9STRA6.090e-6541.50Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A835YUX2_9STRA3.360e-4941.48Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A835Z4J5_9STRA2.990e-4882.88Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A836CJI5_9STRA3.060e-3857.53WD40-repeat-containing domain protein n=1 Tax=Trib... [more]
A0A836CCC0_9STRA5.190e-3160.95Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A835YM31_9STRA9.710e-3160.19Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A835YW32_9STRA1.430e-3069.05Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A835YUY3_9STRA2.760e-2950.77Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A835YTI8_9STRA2.840e-2865.93Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]

Pages

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Contig_194contigContig_194:184837..186284 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Tribonema minus UTEX_B_31562021-06-17
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
jgi.p|Trimin1|353900mRNA_17473Tribonema minus UTEX_B_3156 mRNAContig_194 184768..186284 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Trimin1|353900|estExt_Genemark1.C_Ctg_1940020 ID=Trimin1|353900|estExt_Genemark1.C_Ctg_1940020|Name=jgi.p|Trimin1|353900|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=195bp
MEEERIRVPAPAGSSTQQEIVRMVFTSMARRRLLPKKYWSLSRLLHDTVA
PMIKVHLVADSTNSVILHRLLEGTSRRRIRRLTLDGDFTSTQQRPLSLPP
SLVRLELNGFRARWPVQLERLVYWAIGVSGDAPEPCIDRPLPPKLTELEL
NGCSIATHLPRMLQKLKLGRSFSQELCLTGSLIATVNSSKYSYD*
back to top