Trimin1|353800|estExt_Genemark1.C_Ctg_1850009 (polypeptide) Tribonema minus UTEX_B_3156

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
Namejgi.p|Trimin1|353800
Unique NameTrimin1|353800|estExt_Genemark1.C_Ctg_1850009
Typepolypeptide
OrganismTribonema minus UTEX_B_3156 (Tribonema minus UTEX_B_3156 )
Sequence length449
Homology
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BLAST of jgi.p|Trimin1|353800 vs. uniprot
Match: A0A835Z4E9_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z4E9_9STRA)

HSP 1 Score: 504 bits (1297), Expect = 5.470e-174
Identity = 448/448 (100.00%), Postives = 448/448 (100.00%), Query Frame = 0 
Query:    1 MFTGITPLQYAVYRGKVDTIPDILERYPNDINTTDQYGNTALHMAAYRGACRTIDLLREAGAXXXXXXXXXXXXXXXXXXXXAADAAQRQLQRCCMYQALVDYGLSAGDRNSDGKTPLQLCMEFCAPAKKGAMLALLRVALDAEASAPRGETGQRARDXXXXXXXXXXXXXXXXXXXXRSTELPPGQPVEATAPEVPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGPEAATATXXXXTAAEAPTRRRESLHRLPHSAPPALDVAAATTQEADAQRHAALTPAAAMSVRFATEPFAPPLLLPSAVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAACGTAQVPVAAVLAAVQRCAALLELQGEDLAALSAQVSRLEITVNRVARAQKRADMSAHAPSG 448
            MFTGITPLQYAVYRGKVDTIPDILERYPNDINTTDQYGNTALHMAAYRGACRTIDLLREAGAXXXXXXXXXXXXXXXXXXXXAADAAQRQLQRCCMYQALVDYGLSAGDRNSDGKTPLQLCMEFCAPAKKGAMLALLRVALDAEASAPRGETGQRARDXXXXXXXXXXXXXXXXXXXXRSTELPPGQPVEATAPEVPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGPEAATATXXXXTAAEAPTRRRESLHRLPHSAPPALDVAAATTQEADAQRHAALTPAAAMSVRFATEPFAPPLLLPSAVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAACGTAQVPVAAVLAAVQRCAALLELQGEDLAALSAQVSRLEITVNRVARAQKRADMSAHAPSG
Sbjct:    1 MFTGITPLQYAVYRGKVDTIPDILERYPNDINTTDQYGNTALHMAAYRGACRTIDLLREAGAXXXXXXXXXXXXXXXXXXXXAADAAQRQLQRCCMYQALVDYGLSAGDRNSDGKTPLQLCMEFCAPAKKGAMLALLRVALDAEASAPRGETGQRARDXXXXXXXXXXXXXXXXXXXXRSTELPPGQPVEATAPEVPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGPEAATATXXXXTAAEAPTRRRESLHRLPHSAPPALDVAAATTQEADAQRHAALTPAAAMSVRFATEPFAPPLLLPSAVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAACGTAQVPVAAVLAAVQRCAALLELQGEDLAALSAQVSRLEITVNRVARAQKRADMSAHAPSG 448
The following BLAST results are available for this feature:
BLAST of jgi.p|Trimin1|353800 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A835Z4E9_9STRA5.470e-174100.00Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR002110Ankyrin repeatSMARTSM00248ANK_2acoord: 3..33
e-value: 4.6
score: 16.2
coord: 37..66
e-value: 0.012
score: 24.8
coord: 113..149
e-value: 1600.0
score: 3.5
IPR002110Ankyrin repeatPFAMPF13857Ank_5coord: 24..76
e-value: 1.1E-8
score: 35.1
IPR002110Ankyrin repeatPROSITEPS50088ANK_REPEATcoord: 37..69
score: 12.475739
IPR002110Ankyrin repeatPROSITEPS50088ANK_REPEATcoord: 3..36
score: 9.48422
IPR036770Ankyrin repeat-containing domain superfamilyGENE3D1.25.40.20coord: 2..164
e-value: 1.4E-25
score: 91.9
IPR036770Ankyrin repeat-containing domain superfamilySUPERFAMILY48403Ankyrin repeatcoord: 4..124
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 148..255
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 270..304
NoneNo IPR availablePANTHERPTHR24203ANKYRIN REPEAT FAMILY PROTEINcoord: 3..121
NoneNo IPR availablePROSITEPS50297ANK_REP_REGIONcoord: 37..68
score: 11.267111

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Contig_185contigContig_185:49123..52474 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Tribonema minus UTEX_B_31562021-06-17
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
jgi.p|Trimin1|353800mRNA_15464Tribonema minus UTEX_B_3156 mRNAContig_185 49123..52474 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Trimin1|353800|estExt_Genemark1.C_Ctg_1850009 ID=Trimin1|353800|estExt_Genemark1.C_Ctg_1850009|Name=jgi.p|Trimin1|353800|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=449bp
MFTGITPLQYAVYRGKVDTIPDILERYPNDINTTDQYGNTALHMAAYRGA
CRTIDLLREAGADMQARDAQGNTALHAVAGTGAADAAQRQLQRCCMYQAL
VDYGLSAGDRNSDGKTPLQLCMEFCAPAKKGAMLALLRVALDAEASAPRG
ETGQRARDQAALEAEAGATRVETGDHARRSTELPPGQPVEATAPEVPPPP
AQHAAAAETAAAAGAAPEQLQREASAVEPSLQHEPAAAAVTSPPPSPRQP
PAARQAAACAAAAAAAAAPPGPEAATATAAQATAAEAPTRRRESLHRLPH
SAPPALDVAAATTQEADAQRHAALTPAAAMSVRFATEPFAPPLLLPSAVA
AQEQAQSPPAAAPPAVEAAAAAAAAAAPSGAGGGAACGTAQVPVAAVLAA
VQRCAALLELQGEDLAALSAQVSRLEITVNRVARAQKRADMSAHAPSG*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR002110Ankyrin_rpt
IPR036770Ankyrin_rpt-contain_sf