Trimin1|353798|estExt_Genemark1.C_Ctg_1850001 (polypeptide) Tribonema minus UTEX_B_3156

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
Namejgi.p|Trimin1|353798
Unique NameTrimin1|353798|estExt_Genemark1.C_Ctg_1850001
Typepolypeptide
OrganismTribonema minus UTEX_B_3156 (Tribonema minus UTEX_B_3156 )
Sequence length129
Homology
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BLAST of jgi.p|Trimin1|353798 vs. uniprot
Match: A0A835Z5X9_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z5X9_9STRA)

HSP 1 Score: 174 bits (440), Expect = 8.750e-54
Identity = 128/128 (100.00%), Postives = 128/128 (100.00%), Query Frame = 0 
Query:    1 MQVSSLTRRLLDLGFSRHMQALGSVGGSCLLLLAIFAGLLAWTYVLPSMAEPGRAAHGILTRRALPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRRAQPAGACGSAHWSGLAGGARRYLCP 128
            MQVSSLTRRLLDLGFSRHMQALGSVGGSCLLLLAIFAGLLAWTYVLPSMAEPGRAAHGILTRRALPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRRAQPAGACGSAHWSGLAGGARRYLCP
Sbjct:    1 MQVSSLTRRLLDLGFSRHMQALGSVGGSCLLLLAIFAGLLAWTYVLPSMAEPGRAAHGILTRRALPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRRAQPAGACGSAHWSGLAGGARRYLCP 128
The following BLAST results are available for this feature:
BLAST of jgi.p|Trimin1|353798 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A835Z5X9_9STRA8.750e-54100.00Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Contig_185contigContig_185:83..1675 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Tribonema minus UTEX_B_31562021-06-17
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
jgi.p|Trimin1|353798mRNA_15456Tribonema minus UTEX_B_3156 mRNAContig_185 83..2020 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Trimin1|353798|estExt_Genemark1.C_Ctg_1850001 ID=Trimin1|353798|estExt_Genemark1.C_Ctg_1850001|Name=jgi.p|Trimin1|353798|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=129bp
MQVSSLTRRLLDLGFSRHMQALGSVGGSCLLLLAIFAGLLAWTYVLPSMA
EPGRAAHGILTRRALPPPAPVAAAPSTLLLPLLLLCQRSGTGGSAAAAPP
QRRAQPAGACGSAHWSGLAGGARRYLCP*
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