Trimin1|353775|estExt_Genemark1.C_Ctg_1830016 (polypeptide) Tribonema minus UTEX_B_3156

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	jgi.p\|Trimin1\|353775
Unique Name	Trimin1\|353775\|estExt_Genemark1.C_Ctg_1830016
Type	polypeptide
Organism	Tribonema minus UTEX_B_3156 (Tribonema minus UTEX_B_3156 )
Sequence length	1016

Homology

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BLAST of jgi.p|Trimin1|353775 vs. uniprot
Match: A0A835Z5E9_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z5E9_9STRA)

HSP 1 Score: 1345 bits (3482), Expect = 0.000e+0
Identity = 1015/1015 (100.00%), Postives = 1015/1015 (100.00%), Query Frame = 0

Query:    1 MDAEERVSELEAAVRELAQRLDANSLEVNRVGEDTVAVQSLLRTHSQGLEGLEALRHDVVLRRQALVKLESWCEDEDGWRSRVDGALEHLTDEVRVTARRSLSNQASLGERAVAEDVERGLAECAAEWQRDMARMQSRKWRLDWSDRFSRACLTWRPQQPPDDRSAVADSAVPPPVAAEELLANMQQVSERVAQQEAELEALRRDLARVSLGSAAQLRGTHLHLKSLSQDVPVLREHVVKLDAQMLDLGLQLQQVLTVFLQEPDAAYTAHXXXXXXXXXARHALQHGHVAHVKRRASPLYEDDQEAXXXXXXXXXXXXXXXXXXXXHYHDDEHCHDTDSYNNTIDDRDIDNESLWHVHLHAHEPIDRDRHSYGDSGRDAXXXXXXXXXXXLTPDRNRGSYDISSXXXXXXXXXXXQRVGRRGGSGSSAAAHQAAHSRDAHVGSADADGEWQRPSRGSSAARSAHGSSAHHSERSRSXXXXXXXXXXXXXXXXXXXSDQHCEHTSSKSGAGSXXXXXXXXXXXXEWQQPSHASAGSGYRTPGSSGGDAGGDDAHSGSSARPDGVEDRDVEVCGDGDGGSEVYEEGGVGDDAXXXXXXXXXRPVHHASDAQQQGASSGHQELQLEDDTGAALYDMSDSDGEQQRSSPHAQPQRSTTAAEAAALSPTPFIAVLSETSPSAATLKAITPTLQRTSAAPAAERSVPAAPTAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRHLQRGSLPANEAIQELQSLLDRALGTAAEVDRDFTLGSVRGGARGDDASADDDFDYGDEXXXXXXXXXXXXXRFESEFVDGLGNSAAQEGSVCGDGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXARQMTGDAADAVAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEHAFSSPRQKAEQEVGSPSGSPLGPGRRGSALQRLRARRERLALERQAAGGNADSD 1015
            MDAEERVSELEAAVRELAQRLDANSLEVNRVGEDTVAVQSLLRTHSQGLEGLEALRHDVVLRRQALVKLESWCEDEDGWRSRVDGALEHLTDEVRVTARRSLSNQASLGERAVAEDVERGLAECAAEWQRDMARMQSRKWRLDWSDRFSRACLTWRPQQPPDDRSAVADSAVPPPVAAEELLANMQQVSERVAQQEAELEALRRDLARVSLGSAAQLRGTHLHLKSLSQDVPVLREHVVKLDAQMLDLGLQLQQVLTVFLQEPDAAYTAHXXXXXXXXXARHALQHGHVAHVKRRASPLYEDDQEAXXXXXXXXXXXXXXXXXXXXHYHDDEHCHDTDSYNNTIDDRDIDNESLWHVHLHAHEPIDRDRHSYGDSGRDAXXXXXXXXXXXLTPDRNRGSYDISSXXXXXXXXXXXQRVGRRGGSGSSAAAHQAAHSRDAHVGSADADGEWQRPSRGSSAARSAHGSSAHHSERSRSXXXXXXXXXXXXXXXXXXXSDQHCEHTSSKSGAGSXXXXXXXXXXXXEWQQPSHASAGSGYRTPGSSGGDAGGDDAHSGSSARPDGVEDRDVEVCGDGDGGSEVYEEGGVGDDAXXXXXXXXXRPVHHASDAQQQGASSGHQELQLEDDTGAALYDMSDSDGEQQRSSPHAQPQRSTTAAEAAALSPTPFIAVLSETSPSAATLKAITPTLQRTSAAPAAERSVPAAPTAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRHLQRGSLPANEAIQELQSLLDRALGTAAEVDRDFTLGSVRGGARGDDASADDDFDYGDEXXXXXXXXXXXXXRFESEFVDGLGNSAAQEGSVCGDGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXARQMTGDAADAVAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEHAFSSPRQKAEQEVGSPSGSPLGPGRRGSALQRLRARRERLALERQAAGGNADSD
Sbjct:    1 MDAEERVSELEAAVRELAQRLDANSLEVNRVGEDTVAVQSLLRTHSQGLEGLEALRHDVVLRRQALVKLESWCEDEDGWRSRVDGALEHLTDEVRVTARRSLSNQASLGERAVAEDVERGLAECAAEWQRDMARMQSRKWRLDWSDRFSRACLTWRPQQPPDDRSAVADSAVPPPVAAEELLANMQQVSERVAQQEAELEALRRDLARVSLGSAAQLRGTHLHLKSLSQDVPVLREHVVKLDAQMLDLGLQLQQVLTVFLQEPDAAYTAHXXXXXXXXXARHALQHGHVAHVKRRASPLYEDDQEAXXXXXXXXXXXXXXXXXXXXHYHDDEHCHDTDSYNNTIDDRDIDNESLWHVHLHAHEPIDRDRHSYGDSGRDAXXXXXXXXXXXLTPDRNRGSYDISSXXXXXXXXXXXQRVGRRGGSGSSAAAHQAAHSRDAHVGSADADGEWQRPSRGSSAARSAHGSSAHHSERSRSXXXXXXXXXXXXXXXXXXXSDQHCEHTSSKSGAGSXXXXXXXXXXXXEWQQPSHASAGSGYRTPGSSGGDAGGDDAHSGSSARPDGVEDRDVEVCGDGDGGSEVYEEGGVGDDAXXXXXXXXXRPVHHASDAQQQGASSGHQELQLEDDTGAALYDMSDSDGEQQRSSPHAQPQRSTTAAEAAALSPTPFIAVLSETSPSAATLKAITPTLQRTSAAPAAERSVPAAPTAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRHLQRGSLPANEAIQELQSLLDRALGTAAEVDRDFTLGSVRGGARGDDASADDDFDYGDEXXXXXXXXXXXXXRFESEFVDGLGNSAAQEGSVCGDGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXARQMTGDAADAVAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEHAFSSPRQKAEQEVGSPSGSPLGPGRRGSALQRLRARRERLALERQAAGGNADSD 1015

The following BLAST results are available for this feature:

BLAST of jgi.p|Trimin1|353775 vs. uniprot

BLAST of jgi.p|Trimin1|353775 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1


Match Name	E-value	Identity	Description
A0A835Z5E9_9STRA	0.000e+0	100.00	Uncharacterized protein n=1 Tax=Tribonema minus Ta...	[more]

InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 7..27
None	No IPR available	COILS	Coil	Coil	coord: 178..212
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 422..761
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 604..621
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 582..596
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 774..1015
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 271..329
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 557..573
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 466..502
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 636..659
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 722..756
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 948..975
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 794..808
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 667..693

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
Contig_183	contig	Contig_183:145923..159949 -

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-09-29
Diamond blastp: OGS1.0 vs UniRef90	2022-09-16
OGS1.0 of Tribonema minus UTEX_B_3156	2021-06-17

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
jgi.p\|Trimin1\|353775	mRNA_16697	Tribonema minus UTEX_B_3156	mRNA	Contig_183 145923..159949 -

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>Trimin1|353775|estExt_Genemark1.C_Ctg_1830016 ID=Trimin1|353775|estExt_Genemark1.C_Ctg_1830016|Name=jgi.p|Trimin1|353775|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=1016bp
MDAEERVSELEAAVRELAQRLDANSLEVNRVGEDTVAVQSLLRTHSQGLE
GLEALRHDVVLRRQALVKLESWCEDEDGWRSRVDGALEHLTDEVRVTARR
SLSNQASLGERAVAEDVERGLAECAAEWQRDMARMQSRKWRLDWSDRFSR
ACLTWRPQQPPDDRSAVADSAVPPPVAAEELLANMQQVSERVAQQEAELE
ALRRDLARVSLGSAAQLRGTHLHLKSLSQDVPVLREHVVKLDAQMLDLGL
QLQQVLTVFLQEPDAAYTAHHHRSGGAAAARHALQHGHVAHVKRRASPLY
EDDQEAHPDDNDDDDDAWQRQDAAAQHYHDDEHCHDTDSYNNTIDDRDID
NESLWHVHLHAHEPIDRDRHSYGDSGRDAAAAAAAAAAAALTPDRNRGSY
DISSAAAAAAAAAAAQRVGRRGGSGSSAAAHQAAHSRDAHVGSADADGEW
QRPSRGSSAARSAHGSSAHHSERSRSSAQHSERSRSSAQRSERSRSDQHC
EHTSSKSGAGSNGDGGDGNDDDDEWQQPSHASAGSGYRTPGSSGGDAGGD
DAHSGSSARPDGVEDRDVEVCGDGDGGSEVYEEGGVGDDAEDDDDDDWQR
PVHHASDAQQQGASSGHQELQLEDDTGAALYDMSDSDGEQQRSSPHAQPQ
RSTTAAEAAALSPTPFIAVLSETSPSAATLKAITPTLQRTSAAPAAERSV
PAAPTAAAAAAAAAAAAAPSSRAAAVQTSPMPPPLQQQQQQQRHLQRGSL
PANEAIQELQSLLDRALGTAAEVDRDFTLGSVRGGARGDDASADDDFDYG
DEDEYDAGDRGDFDARFESEFVDGLGNSAAQEGSVCGDGDAAAADSDPQG
AAAADVTAMDSDGASAEGARQMTGDAADAVAAAAAAAAAAAAAAADDDLA
RTNSADECHENNAAAAARGSSGSAHAGAPTATALRQRRRHGSSSHSDGDS
SDDGGGSSSEHAFSSPRQKAEQEVGSPSGSPLGPGRRGSALQRLRARRER
LALERQAAGGNADSD*