Trimin1|353729|estExt_Genemark1.C_Ctg_1790047 (polypeptide) Tribonema minus UTEX_B_3156

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
Namejgi.p|Trimin1|353729
Unique NameTrimin1|353729|estExt_Genemark1.C_Ctg_1790047
Typepolypeptide
OrganismTribonema minus UTEX_B_3156 (Tribonema minus UTEX_B_3156 )
Sequence length632
Homology
BLAST of jgi.p|Trimin1|353729 vs. uniprot
Match: A0A835Z6C5_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z6C5_9STRA)

HSP 1 Score: 1159 bits (2999), Expect = 0.000e+0
Identity = 631/631 (100.00%), Postives = 631/631 (100.00%), Query Frame = 0
Query:    1 MATEASRQAFQGFLPVDLLEQVITFLDPRSLHDLLSLSTTYRQLSVAHIWRQFVLDNMKGLHNLDAIAVDDRDWEQQLWTWTYSAFTWRRVACGGTGDPGPEPRYLHRMAVDDDNVAWLFGGWGEPVLLNDLWKLDLTKPALRWEQVDAGAAHGDGGXXXXXXXXGELGFAIPQQAGAAAPAVAADNAVDGVPEADGAAGDDALMGDYEAAXXXXXXXXXXXXXXXXXXXXADAARPAARCAASWTHMPGTRHAYLFGGMGEDGEFYADLWRFDMRRGAWEERPVVAARKGARASDGVVRCWDDARRRDAREAVSDAVRLNVVAAWTRLEALRVPSVLASLITTVPEARRIEQCLPLPQSGAQVPGSRWGHTAVALDGTLYVYGGSMPGECFAELWAMTPGTDADTGAAAVRWTLLAXXXXXXXXXXXXXXXXXXXXXXXVPGDAPPRRGGHSATLLGGHMYVFGGNTVQTCYNDLWRIALPAARRWEALAVRAPCPEKRIGHQAVAIGRKLFIFGGRSFSTNQFAKDASCYDVDEGRFVAAGEGWRQAGGCRTGHAAILCDRGMLVFGGLLEPMAAPPRAGLLLLDMSGQAHRRRRGAAAAEDADSGTGCKSGNADGAPGMSVAGEGSCC 631
            MATEASRQAFQGFLPVDLLEQVITFLDPRSLHDLLSLSTTYRQLSVAHIWRQFVLDNMKGLHNLDAIAVDDRDWEQQLWTWTYSAFTWRRVACGGTGDPGPEPRYLHRMAVDDDNVAWLFGGWGEPVLLNDLWKLDLTKPALRWEQVDAGAAHGDGGXXXXXXXXGELGFAIPQQAGAAAPAVAADNAVDGVPEADGAAGDDALMGDYEAAXXXXXXXXXXXXXXXXXXXXADAARPAARCAASWTHMPGTRHAYLFGGMGEDGEFYADLWRFDMRRGAWEERPVVAARKGARASDGVVRCWDDARRRDAREAVSDAVRLNVVAAWTRLEALRVPSVLASLITTVPEARRIEQCLPLPQSGAQVPGSRWGHTAVALDGTLYVYGGSMPGECFAELWAMTPGTDADTGAAAVRWTLLAXXXXXXXXXXXXXXXXXXXXXXXVPGDAPPRRGGHSATLLGGHMYVFGGNTVQTCYNDLWRIALPAARRWEALAVRAPCPEKRIGHQAVAIGRKLFIFGGRSFSTNQFAKDASCYDVDEGRFVAAGEGWRQAGGCRTGHAAILCDRGMLVFGGLLEPMAAPPRAGLLLLDMSGQAHRRRRGAAAAEDADSGTGCKSGNADGAPGMSVAGEGSCC
Sbjct:    1 MATEASRQAFQGFLPVDLLEQVITFLDPRSLHDLLSLSTTYRQLSVAHIWRQFVLDNMKGLHNLDAIAVDDRDWEQQLWTWTYSAFTWRRVACGGTGDPGPEPRYLHRMAVDDDNVAWLFGGWGEPVLLNDLWKLDLTKPALRWEQVDAGAAHGDGGXXXXXXXXGELGFAIPQQAGAAAPAVAADNAVDGVPEADGAAGDDALMGDYEAAXXXXXXXXXXXXXXXXXXXXADAARPAARCAASWTHMPGTRHAYLFGGMGEDGEFYADLWRFDMRRGAWEERPVVAARKGARASDGVVRCWDDARRRDAREAVSDAVRLNVVAAWTRLEALRVPSVLASLITTVPEARRIEQCLPLPQSGAQVPGSRWGHTAVALDGTLYVYGGSMPGECFAELWAMTPGTDADTGAAAVRWTLLAXXXXXXXXXXXXXXXXXXXXXXXVPGDAPPRRGGHSATLLGGHMYVFGGNTVQTCYNDLWRIALPAARRWEALAVRAPCPEKRIGHQAVAIGRKLFIFGGRSFSTNQFAKDASCYDVDEGRFVAAGEGWRQAGGCRTGHAAILCDRGMLVFGGLLEPMAAPPRAGLLLLDMSGQAHRRRRGAAAAEDADSGTGCKSGNADGAPGMSVAGEGSCC 631          
BLAST of jgi.p|Trimin1|353729 vs. uniprot
Match: A0A7S2NPE1_9EUKA (Hypothetical protein n=1 Tax=Haptolina brevifila TaxID=156173 RepID=A0A7S2NPE1_9EUKA)

HSP 1 Score: 96.3 bits (238), Expect = 4.040e-18
Identity = 74/239 (30.96%), Postives = 98/239 (41.00%), Query Frame = 0
Query:  343 TTVPEARRIEQCLPLPQSGAQVPGSRWGHTAVALDGTLYVYGGSMPGECFAEL-WAMTPGTDADTGAAAVRWTLLAXXXXXXXXXXXXXXXXXXXXXXXVPGDAPPRRGGHSATLLGGHMYVFGGNTVQTCYNDLWRIALPAARRWEALAVRAPCPEKRIGHQAVAIGRKLFIFGGRSFSTNQFAKDASCYDVDEGRFVAAGEGWRQAGGC----RTGHAAILCDRGMLVFGGLLEPMA 576
            T V E+  +   +     GA  P  RW H+AV     +  +GGS PG CF +L W        D  +   R   +A                         G  P  R GH A  LG  M+VFGGNT ++ +NDLW  A   A            P  R+GH   AIG +L + GGR ++TNQF      ++V   R+            C    RTGH A +    +LVFGGL +  A
Sbjct:   97 TCVRESDVLHNIVAAANDGA-APTPRWAHSAVCFGERVLFFGGSAPGRCFNDLHWF-------DMRSLTWRRQTVAS------------------------GTLPLARSGHCACALGDAMFVFGGNTTKSSFNDLWEYATLEASWKLVRRASGTSPSGRVGHTLTAIGSRLLVLGGREYTTNQFDAALHSFNVRSRRWSEVPLRTPSGEPCDATLRTGHCAAVHAGRLLVFGGLNQEAA 303          
BLAST of jgi.p|Trimin1|353729 vs. uniprot
Match: A0A6U0DS94_9CHLO (Hypothetical protein n=1 Tax=Ostreococcus mediterraneus TaxID=1486918 RepID=A0A6U0DS94_9CHLO)

HSP 1 Score: 97.8 bits (242), Expect = 1.500e-17
Identity = 52/160 (32.50%), Postives = 79/160 (49.38%), Query Frame = 0
Query:  363 QVPGSRWGHTAVALDGTLYVYGGSMPGECFAELWAMTPGTDADTGAAAVRWTLLAXXXXXXXXXXXXXXXXXXXXXXXVPGDAPPRRGGHSATLLGGHMYVFGGNTVQTCYNDLWR---IALPAAR-RWEALAVRAPCPEKRIGHQAVAIGRKLFIFGGR 518
            ++P +RWGH+AVA DG L ++GGS    CFA+ W +      + G     WTLL                          G  PP R G +A+L+G  +++FGG  +   +ND+W+   + +P  + RWE   V    P  R+GH AV +G ++ + GGR
Sbjct:  411 RIPDARWGHSAVAFDGKLLLFGGSNTTHCFADTWLLE--ISQEQGRFIATWTLLIDGAHHGI------------------GSCPPPRAGQTASLVGSSLFIFGGCHISEVFNDVWKLDVVGVPKEKLRWEEFKVTGIPPSPRVGHAAVVLGDRIILCGGR 550          
BLAST of jgi.p|Trimin1|353729 vs. uniprot
Match: A0A8J6CK61_DIALT (Uncharacterized protein n=2 Tax=Diacronema lutheri TaxID=2081491 RepID=A0A8J6CK61_DIALT)

HSP 1 Score: 88.6 bits (218), Expect = 4.950e-15
Identity = 63/217 (29.03%), Postives = 86/217 (39.63%), Query Frame = 0
Query:  356 PLPQSGAQVPGSRWGHTAVALDGT-LYVYGGSMPGECFAELWAMTPGTDADTGAAAVRWTLLAXXXXXXXXXXXXXXXXXXXXXXXVPGDAPPRRGGHSATLLGGHMYVFGGNTVQTCYNDLWRIALPAARRWEALAVRAPCPEKRIGHQAVAIGRKLFIFGGRSFSTNQFAKDASCYDVDEGRFVAAGEGWRQAGGCRTGHAAILCDRGMLVFGGL 571
            P P +  + P  RW H+AV    T + V+GGS PG CF ++++++  T        V                               G  PP R GHS  ++ G MY                         +     +P    R+GH  +  G +L +FGGR FS N F     C+D+   R+     G  Q    RTGHAAI C+ G LVFGGL
Sbjct:  219 PQPSASCKRPDGRWAHSAVTHGSTEVIVFGGSAPGRCFNDIFSLSMPTHQWVEHECV-------------------------------GTRPPPRSGHSVCVVQGSMYXXXXXXXXXXXXXXXXXXXXXXXXTQVRTKASP--SARVGHALIPFGNRLMLFGGRKFSENTFDSALHCFDLQARRWSELAVGGLQPR-VRTGHAAIPCNGGFLVFGGL 401          
BLAST of jgi.p|Trimin1|353729 vs. uniprot
Match: UPI0014256A60 (kelch domain-containing protein 3-like isoform X1 n=2 Tax=Anneissia japonica TaxID=1529436 RepID=UPI0014256A60)

HSP 1 Score: 80.5 bits (197), Expect = 1.560e-12
Identity = 66/217 (30.41%), Postives = 98/217 (45.16%), Query Frame = 0
Query:  364 VPGSRWGHTAVALDGTLYVYGG-SMPGECFAELWAMTPGTDADTGAAAVRWTLLAXXXXXXXXXXXXXXXXXXXXXXXVPGDAPPRRGGHSATLLGGHMYVFGG-NTVQTCY-NDLWRIALPAARRWEALAVRAPCPEKRIGHQAVAIGRKLFIFGGRS------FSTNQFAKDASCYDVDEGRFVAAGEGWRQAGGCRTGHAA-ILCDRGMLVFGG 570
            +P  R+GH+AVA +  +Y++GG + P     EL+            A+++W L                           GD PP R GHS  L+   MY+FGG   +  C+ N + R+ +   + W+ L  R      R  H AVAIG+ +FIFGGRS      FS N+F  +       + +  +A E W+     R  H+A + CD  M +FGG
Sbjct:   72 IPFMRYGHSAVAYNDNIYIFGGRNDPDGACNELFCFQ--------TASLKWCL-----------------------PKPTGDIPPARDGHSVCLVKNKMYIFGGYEDLSQCFSNSIHRLNIDKMK-WKRLTCRGNAAYWRDFHSAVAIGQYMFIFGGRSDKNGQWFSDNEFYSNKLEVFDTKSKTWSAPETWKSVPVGRRSHSAFVYCDN-MYIFGG 255          
BLAST of jgi.p|Trimin1|353729 vs. uniprot
Match: A0A7S2V798_9STRA (Hypothetical protein (Fragment) n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2V798_9STRA)

HSP 1 Score: 77.4 bits (189), Expect = 2.190e-12
Identity = 53/147 (36.05%), Postives = 71/147 (48.30%), Query Frame = 0
Query:  445 APPRRGGHSATLLGGHMYVFGGNTVQTCYNDLWRIALPAARRWEALAVRAPC--PEKRIGHQAVAI--------------GRKLFIFGGRSFSTNQFAKDASCYDVDEGRF--VAAGEGWRQAGGCR--TGHAAILCDRGMLVFGGL 571
            AP  RGGH+A L+G  MY+FGGNT++  YNDLWR+ L     WE +     C  P  RIGH    I              G  L + GGR++ T ++      ++     +  V  G G R+ G  R  TG A+     G+LV GGL
Sbjct:   79 APGPRGGHAAALVGSTMYIFGGNTLEETYNDLWRLDLDQLDAWEQVCPPQGCSAPTARIGHTLTWIPSLSPKGGAASEGKGHCLMLIGGRNYLTREYQHQIWLFNTQSSEWQRVRPGNGGRR-GLDRPVTGLASAAWADGVLVLGGL 224          
BLAST of jgi.p|Trimin1|353729 vs. uniprot
Match: UPI00143CD2D1 (host cell factor 2-like n=3 Tax=Cynipoidea TaxID=40307 RepID=UPI00143CD2D1)

HSP 1 Score: 75.1 bits (183), Expect = 2.230e-10
Identity = 51/130 (39.23%), Postives = 63/130 (48.46%), Query Frame = 0
Query:  443 GDAPPRRGGHSATLLGGHMYVFGGNTVQTCYNDLWRIALPAARRWEALAVRAPCPEKRIGHQAVAIGRKLFIFGGRSFSTNQFAKDASCYDV--DEGRFVAAGEGWRQAGGCRTGHAAILCDRGMLVFGG 570
            G APP R  HSATLLGGH+Y+ GG        DLWR +L A  RWE L      P     H AVA    L++FGG    +        CY V  +  R + A  G     G R GH A++    ML++GG
Sbjct:   13 GPAPPSRSKHSATLLGGHVYLLGGRNGNLPLKDLWRYSL-AESRWEELHPGGERPPALQEHSAVAYKDCLYVFGGELGFSAGVETPLWCYAVKTNSWRKIRAQRGCAVPRG-RRGHTALVHRGQMLIYGG 140          
BLAST of jgi.p|Trimin1|353729 vs. uniprot
Match: UPI00158B5220 (tip elongation aberrant protein 1-like isoform X2 n=1 Tax=Chelonus insularis TaxID=460826 RepID=UPI00158B5220)

HSP 1 Score: 73.6 bits (179), Expect = 6.500e-10
Identity = 51/139 (36.69%), Postives = 65/139 (46.76%), Query Frame = 0
Query:  443 GDAPPRRGGHSATLLGGHMYVFGGNTVQTCYNDLWRIALPAARRWEALAVRAPCPEKRIGHQAVAIGRKLFIFGGRSFSTNQFAKDASCYDV--DEGRFVAAGEGWRQAGGCRTGHAAILCDRGMLVFGGLLEPMAAPP 579
            G APP R  HSATLLGGH+Y+ GG        DLWR +L A  RWE L      P     H AVA    L++FGG    +         Y V  +  R + A  G     G R GH A++    ML++GG  +   + P
Sbjct:   13 GPAPPSRSKHSATLLGGHVYLLGGRNGNLPLKDLWRYSL-AESRWEELHPSGERPPALQEHSAVAYKDCLYVFGGELGFSAGIETPLWIYTVKTNSWRKIRAQRGCAVPRG-RRGHTALVHRGQMLIYGGYQDLRGSSP 149          
BLAST of jgi.p|Trimin1|353729 vs. uniprot
Match: A0A0C9RWE8_9HYME (Tea1_0 protein n=3 Tax=Braconidae TaxID=7402 RepID=A0A0C9RWE8_9HYME)

HSP 1 Score: 72.4 bits (176), Expect = 1.600e-9
Identity = 51/130 (39.23%), Postives = 61/130 (46.92%), Query Frame = 0
Query:  443 GDAPPRRGGHSATLLGGHMYVFGGNTVQTCYNDLWRIALPAARRWEALAVRAPCPEKRIGHQAVAIGRKLFIFGGRSFSTNQFAKDASCYDVDEG--RFVAAGEGWRQAGGCRTGHAAILCDRGMLVFGG 570
            G APP R  HSATLLGGH+Y+ GG        DLWR +L A  RWE L      P     H AV+    L++FGG    +         Y V     R V A  G     G R GH A++    MLV+GG
Sbjct:   13 GPAPPSRSKHSATLLGGHVYLLGGRNGNLPLRDLWRYSL-AESRWEELHPSGERPPALQEHSAVSYKDSLYVFGGELGFSAGTETPLWVYSVKTNTWRKVRAQRGCAVPRG-RRGHTALVHRGQMLVYGG 140          
BLAST of jgi.p|Trimin1|353729 vs. uniprot
Match: UPI001888DE52 (uncharacterized protein LOC119168464 n=1 Tax=Rhipicephalus microplus TaxID=6941 RepID=UPI001888DE52)

HSP 1 Score: 71.6 bits (174), Expect = 3.060e-9
Identity = 51/136 (37.50%), Postives = 67/136 (49.26%), Query Frame = 0
Query:  443 GDAPPRRGGHSATLLGGHMYVFGG--NTVQTCYNDLWRIALPAARRWEALAVRAPCPEKRIGHQAVAIGRKLFIFGGRSFSTNQFAKDASC-----YDVDEGRFV-AAGEGWRQAGGCRTGHAAILCDRGMLVFGG 570
            G+ P  R GHSA ++G  MYVFGG  +       D+  + L     W  LA R   PE R  H AVAIGR+++++GGR  ST+   + A C      D   G +V    +G    G C   HAA +    M VFGG
Sbjct:  114 GETPAAREGHSACVVGSRMYVFGGIDDEADRMSQDVHVLDLDTMH-WRFLATRGNAPEWRSFHTAVAIGRRMYVWGGRRSSTDLHDEVAYCDRLAYLDTTNGAWVHPVTKGMTPLGRCS--HAAFVYKGEMYVFGG 246          
The following BLAST results are available for this feature:
BLAST of jgi.p|Trimin1|353729 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A835Z6C5_9STRA0.000e+0100.00Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A7S2NPE1_9EUKA4.040e-1830.96Hypothetical protein n=1 Tax=Haptolina brevifila T... [more]
A0A6U0DS94_9CHLO1.500e-1732.50Hypothetical protein n=1 Tax=Ostreococcus mediterr... [more]
A0A8J6CK61_DIALT4.950e-1529.03Uncharacterized protein n=2 Tax=Diacronema lutheri... [more]
UPI0014256A601.560e-1230.41kelch domain-containing protein 3-like isoform X1 ... [more]
A0A7S2V798_9STRA2.190e-1236.05Hypothetical protein (Fragment) n=1 Tax=Fibrocapsa... [more]
UPI00143CD2D12.230e-1039.23host cell factor 2-like n=3 Tax=Cynipoidea TaxID=4... [more]
UPI00158B52206.500e-1036.69tip elongation aberrant protein 1-like isoform X2 ... [more]
A0A0C9RWE8_9HYME1.600e-939.23Tea1_0 protein n=3 Tax=Braconidae TaxID=7402 RepID... [more]
UPI001888DE523.060e-937.50uncharacterized protein LOC119168464 n=1 Tax=Rhipi... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePFAMPF13418Kelch_4coord: 254..283
e-value: 1.5E-5
score: 24.8
coord: 103..147
e-value: 5.5E-6
score: 26.2
NoneNo IPR availablePFAMPF13415Kelch_3coord: 459..508
e-value: 4.6E-7
score: 30.0
NoneNo IPR availablePANTHERPTHR23244KELCH REPEAT DOMAINcoord: 81..175
coord: 251..575
IPR015915Kelch-type beta propellerGENE3D2.120.10.80coord: 221..301
e-value: 7.6E-7
score: 30.8
coord: 68..162
e-value: 2.2E-8
score: 35.8
IPR015915Kelch-type beta propellerGENE3D2.120.10.80coord: 304..583
e-value: 3.5E-37
score: 129.9
IPR015915Kelch-type beta propellerSUPERFAMILY117281Kelch motifcoord: 75..547
IPR036047F-box-like domain superfamilySUPERFAMILY81383F-box domaincoord: 12..73

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Contig_179contigContig_179:283027..288870 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Tribonema minus UTEX_B_31562021-06-17
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
jgi.p|Trimin1|353729mRNA_15411Tribonema minus UTEX_B_3156 mRNAContig_179 283027..288931 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Trimin1|353729|estExt_Genemark1.C_Ctg_1790047 ID=Trimin1|353729|estExt_Genemark1.C_Ctg_1790047|Name=jgi.p|Trimin1|353729|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=632bp
MATEASRQAFQGFLPVDLLEQVITFLDPRSLHDLLSLSTTYRQLSVAHIW
RQFVLDNMKGLHNLDAIAVDDRDWEQQLWTWTYSAFTWRRVACGGTGDPG
PEPRYLHRMAVDDDNVAWLFGGWGEPVLLNDLWKLDLTKPALRWEQVDAG
AAHGDGGGGGHGGSGGELGFAIPQQAGAAAPAVAADNAVDGVPEADGAAG
DDALMGDYEAAAAAEAVAAPQQQQQAAAVVAADAARPAARCAASWTHMPG
TRHAYLFGGMGEDGEFYADLWRFDMRRGAWEERPVVAARKGARASDGVVR
CWDDARRRDAREAVSDAVRLNVVAAWTRLEALRVPSVLASLITTVPEARR
IEQCLPLPQSGAQVPGSRWGHTAVALDGTLYVYGGSMPGECFAELWAMTP
GTDADTGAAAVRWTLLALWAMTPATDADTGAPAARWTLLAVPGDAPPRRG
GHSATLLGGHMYVFGGNTVQTCYNDLWRIALPAARRWEALAVRAPCPEKR
IGHQAVAIGRKLFIFGGRSFSTNQFAKDASCYDVDEGRFVAAGEGWRQAG
GCRTGHAAILCDRGMLVFGGLLEPMAAPPRAGLLLLDMSGQAHRRRRGAA
AAEDADSGTGCKSGNADGAPGMSVAGEGSCC*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR015915Kelch-typ_b-propeller
IPR036047F-box-like_dom_sf