Trimin1|353507|estExt_Genemark1.C_Ctg_1670009 (polypeptide) Tribonema minus UTEX_B_3156

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	jgi.p\|Trimin1\|353507
Unique Name	Trimin1\|353507\|estExt_Genemark1.C_Ctg_1670009
Type	polypeptide
Organism	Tribonema minus UTEX_B_3156 (Tribonema minus UTEX_B_3156 )
Sequence length	1055

Homology

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BLAST of jgi.p|Trimin1|353507 vs. uniprot
Match: A0A835Z9I0_9STRA (BTB domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z9I0_9STRA)

HSP 1 Score: 1578 bits (4085), Expect = 0.000e+0
Identity = 1054/1054 (100.00%), Postives = 1054/1054 (100.00%), Query Frame = 0

Query:    1 MTAVPAAATAATTDIAAASHASGDAPTPTAAAAGLSDYKLSTASALSDALKQRWKERWFLLASQRYAARQQQQRELAIMRSHDKPPXXXXPLTPPTKPQHNGRSQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAAWFAAVAAGGIQHVSAMLRMGAVLDWRLEDCRSSTSGTLSLNGGGQDASGNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAHSVAGDSYPEAXXXXXXXXXXXXXXXXXXXXXXXXXXXSLSAVAANFGGVTALHIAAAAGDAAMVQVLVDAAGVGLVSAKDKARRTPLHHAAAAAGAARSDVAALRTWLLAPLRADVVSCEERSEGVGLSQAGGDLQRRGSSCGLRTGAHAAAPALSAXXXXXXXXXXXXXXXXXXXXXTEPDTLSAEAEADASLEPAACMANAGECVAALLRHGARADAKDRSGRTPLHVAAALGNADAARALLGARGAAAKPVKGGHREVVAVLLGAGGLVDAPDERGVTPLTAAAVGGDAELLMTLLAANQAKCWAASKPQQXXXXRAPQRTSTAAKRSRVGGVGGCGLSALHEAAAAGQTACVAALLHYGMNPCAKEPGPEGNTPLGRALLAPNGPHLDICAALLDHAGPPVLAVENAALETPLVLAARVPSDNPAAVRLLLRHCGGDAADAKAVVNARSGHAETLTALSAALAAGNVRVTAALLQLGATMSLRALRSAQLTPPAGXXXXXXXXXXSSNLLDLLDEPDRDSGGTSDVTLELQGGQQLRCHSAILVAFSGYFARTLTAAEGAAAVDEPVVVPCYGWEAATVVTLVRCMYAGMLVEPLRQASTDELVDLLHASHALGCSRTFVQVQHALGTWGHVTDATVVDLFQLAAAVTLSETFRDHAEHRPTAIMLSGSTTAAAVACDETAGLGLALGLQADSKAAILEAYCVAHVQRQALLGSGNSAKQQALRRRLQQIPVLNMADVSLKESELSCTAYLGTGLCHQWLSGQTGNKELQLKAKQQRISTSLDVTLGRTV 1054
            MTAVPAAATAATTDIAAASHASGDAPTPTAAAAGLSDYKLSTASALSDALKQRWKERWFLLASQRYAARQQQQRELAIMRSHDKPPXXXXPLTPPTKPQHNGRSQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAAWFAAVAAGGIQHVSAMLRMGAVLDWRLEDCRSSTSGTLSLNGGGQDASGNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAHSVAGDSYPEAXXXXXXXXXXXXXXXXXXXXXXXXXXXSLSAVAANFGGVTALHIAAAAGDAAMVQVLVDAAGVGLVSAKDKARRTPLHHAAAAAGAARSDVAALRTWLLAPLRADVVSCEERSEGVGLSQAGGDLQRRGSSCGLRTGAHAAAPALSAXXXXXXXXXXXXXXXXXXXXXTEPDTLSAEAEADASLEPAACMANAGECVAALLRHGARADAKDRSGRTPLHVAAALGNADAARALLGARGAAAKPVKGGHREVVAVLLGAGGLVDAPDERGVTPLTAAAVGGDAELLMTLLAANQAKCWAASKPQQXXXXRAPQRTSTAAKRSRVGGVGGCGLSALHEAAAAGQTACVAALLHYGMNPCAKEPGPEGNTPLGRALLAPNGPHLDICAALLDHAGPPVLAVENAALETPLVLAARVPSDNPAAVRLLLRHCGGDAADAKAVVNARSGHAETLTALSAALAAGNVRVTAALLQLGATMSLRALRSAQLTPPAGXXXXXXXXXXSSNLLDLLDEPDRDSGGTSDVTLELQGGQQLRCHSAILVAFSGYFARTLTAAEGAAAVDEPVVVPCYGWEAATVVTLVRCMYAGMLVEPLRQASTDELVDLLHASHALGCSRTFVQVQHALGTWGHVTDATVVDLFQLAAAVTLSETFRDHAEHRPTAIMLSGSTTAAAVACDETAGLGLALGLQADSKAAILEAYCVAHVQRQALLGSGNSAKQQALRRRLQQIPVLNMADVSLKESELSCTAYLGTGLCHQWLSGQTGNKELQLKAKQQRISTSLDVTLGRTV
Sbjct:    1 MTAVPAAATAATTDIAAASHASGDAPTPTAAAAGLSDYKLSTASALSDALKQRWKERWFLLASQRYAARQQQQRELAIMRSHDKPPXXXXPLTPPTKPQHNGRSQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAAWFAAVAAGGIQHVSAMLRMGAVLDWRLEDCRSSTSGTLSLNGGGQDASGNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAHSVAGDSYPEAXXXXXXXXXXXXXXXXXXXXXXXXXXXSLSAVAANFGGVTALHIAAAAGDAAMVQVLVDAAGVGLVSAKDKARRTPLHHAAAAAGAARSDVAALRTWLLAPLRADVVSCEERSEGVGLSQAGGDLQRRGSSCGLRTGAHAAAPALSAXXXXXXXXXXXXXXXXXXXXXTEPDTLSAEAEADASLEPAACMANAGECVAALLRHGARADAKDRSGRTPLHVAAALGNADAARALLGARGAAAKPVKGGHREVVAVLLGAGGLVDAPDERGVTPLTAAAVGGDAELLMTLLAANQAKCWAASKPQQXXXXRAPQRTSTAAKRSRVGGVGGCGLSALHEAAAAGQTACVAALLHYGMNPCAKEPGPEGNTPLGRALLAPNGPHLDICAALLDHAGPPVLAVENAALETPLVLAARVPSDNPAAVRLLLRHCGGDAADAKAVVNARSGHAETLTALSAALAAGNVRVTAALLQLGATMSLRALRSAQLTPPAGXXXXXXXXXXSSNLLDLLDEPDRDSGGTSDVTLELQGGQQLRCHSAILVAFSGYFARTLTAAEGAAAVDEPVVVPCYGWEAATVVTLVRCMYAGMLVEPLRQASTDELVDLLHASHALGCSRTFVQVQHALGTWGHVTDATVVDLFQLAAAVTLSETFRDHAEHRPTAIMLSGSTTAAAVACDETAGLGLALGLQADSKAAILEAYCVAHVQRQALLGSGNSAKQQALRRRLQQIPVLNMADVSLKESELSCTAYLGTGLCHQWLSGQTGNKELQLKAKQQRISTSLDVTLGRTV 1054

[Close]

BLAST of jgi.p|Trimin1|353507 vs. uniprot
Match: A0A835Z5Q5_9STRA (Ankyrin repeat-containing domain protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z5Q5_9STRA)

HSP 1 Score: 530 bits (1365), Expect = 9.150e-177
Identity = 324/324 (100.00%), Postives = 324/324 (100.00%), Query Frame = 0

Query:  298 SLSAVAANFGGVTALHIAAAAGDAAMVQVLVDAAGVGLVSAKDKARRTPLHHAAAAAGAARSDVAALRTWLLAPLRADVVSCEERSEGVGLSQAGGDLQRRGSSCGLRTGAHAAAPALSAXXXXXXXXXXXXXXXXXXXXXTEPDTLSAEAEADASLEPAACMANAGECVAALLRHGARADAKDRSGRTPLHVAAALGNADAARALLGARGAAAKPVKGGHREVVAVLLGAGGLVDAPDERGVTPLTAAAVGGDAELLMTLLAANQAKCWAASKPQQXXXXRAPQRTSTAAKRSRVGGVGGCGLSALHEAAAAGQTACVAALLH 621
            SLSAVAANFGGVTALHIAAAAGDAAMVQVLVDAAGVGLVSAKDKARRTPLHHAAAAAGAARSDVAALRTWLLAPLRADVVSCEERSEGVGLSQAGGDLQRRGSSCGLRTGAHAAAPALSAXXXXXXXXXXXXXXXXXXXXXTEPDTLSAEAEADASLEPAACMANAGECVAALLRHGARADAKDRSGRTPLHVAAALGNADAARALLGARGAAAKPVKGGHREVVAVLLGAGGLVDAPDERGVTPLTAAAVGGDAELLMTLLAANQAKCWAASKPQQXXXXRAPQRTSTAAKRSRVGGVGGCGLSALHEAAAAGQTACVAALLH
Sbjct:   60 SLSAVAANFGGVTALHIAAAAGDAAMVQVLVDAAGVGLVSAKDKARRTPLHHAAAAAGAARSDVAALRTWLLAPLRADVVSCEERSEGVGLSQAGGDLQRRGSSCGLRTGAHAAAPALSAXXXXXXXXXXXXXXXXXXXXXTEPDTLSAEAEADASLEPAACMANAGECVAALLRHGARADAKDRSGRTPLHVAAALGNADAARALLGARGAAAKPVKGGHREVVAVLLGAGGLVDAPDERGVTPLTAAAVGGDAELLMTLLAANQAKCWAASKPQQXXXXRAPQRTSTAAKRSRVGGVGGCGLSALHEAAAAGQTACVAALLH 383

The following BLAST results are available for this feature:

BLAST of jgi.p|Trimin1|353507 vs. uniprot

BLAST of jgi.p|Trimin1|353507 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2


Match Name	E-value	Identity	Description
A0A835Z9I0_9STRA	0.000e+0	100.00	BTB domain-containing protein n=1 Tax=Tribonema mi...	[more]
A0A835Z5Q5_9STRA	9.150e-177	100.00	Ankyrin repeat-containing domain protein n=1 Tax=T...	[more]

InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR002110	Ankyrin repeat	SMART	SM00248	ANK_2a	coord: 483..512 e-value: 0.46 score: 19.5 coord: 538..567 e-value: 250.0 score: 9.4 coord: 717..746 e-value: 170.0 score: 10.7 coord: 634..666 e-value: 310.0 score: 8.8 coord: 672..704 e-value: 220.0 score: 10.0 coord: 599..628 e-value: 0.15 score: 21.2 coord: 342..376 e-value: 4600.0 score: 0.0 coord: 307..338 e-value: 1.7 score: 17.7
IPR002110	Ankyrin repeat	PFAM	PF13857	Ank_5	coord: 470..511 e-value: 1.4E-6 score: 28.4
IPR002110	Ankyrin repeat	PFAM	PF12796	Ank_2	coord: 512..629 e-value: 3.8E-6 score: 27.4
IPR002110	Ankyrin repeat	PROSITE	PS50088	ANK_REPEAT	coord: 599..631 score: 8.68292
IPR002110	Ankyrin repeat	PROSITE	PS50088	ANK_REPEAT	coord: 483..504 score: 9.93829
IPR002110	Ankyrin repeat	PROSITE	PS50088	ANK_REPEAT	coord: 307..329 score: 9.05686
IPR036770	Ankyrin repeat-containing domain superfamily	GENE3D	1.25.40.20		coord: 513..589 e-value: 2.1E-7 score: 32.7
IPR036770	Ankyrin repeat-containing domain superfamily	GENE3D	1.25.40.20		coord: 287..382 e-value: 2.2E-8 score: 35.7
IPR036770	Ankyrin repeat-containing domain superfamily	GENE3D	1.25.40.20		coord: 456..512 e-value: 1.5E-10 score: 42.7
IPR036770	Ankyrin repeat-containing domain superfamily	GENE3D	1.25.40.20		coord: 590..760 e-value: 1.5E-16 score: 62.6
IPR036770	Ankyrin repeat-containing domain superfamily	SUPERFAMILY	48403	Ankyrin repeat	coord: 301..352
IPR036770	Ankyrin repeat-containing domain superfamily	SUPERFAMILY	48403	Ankyrin repeat	coord: 457..697
IPR011333	SKP1/BTB/POZ domain superfamily	GENE3D	3.30.710.10	Potassium Channel Kv1.1; Chain A	coord: 761..922 e-value: 1.3E-13 score: 53.0
IPR011333	SKP1/BTB/POZ domain superfamily	SUPERFAMILY	54695	POZ domain	coord: 769..883
IPR000210	BTB/POZ domain	PFAM	PF00651	BTB	coord: 782..887 e-value: 5.8E-9 score: 36.2
IPR000210	BTB/POZ domain	PROSITE	PS50097	BTB	coord: 788..859 score: 11.212689
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 97..134
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 570..589
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 82..96
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 72..141
None	No IPR available	PANTHER	PTHR24124	ANKYRIN REPEAT FAMILY A	coord: 255..753
None	No IPR available	PROSITE	PS50297	ANK_REP_REGION	coord: 483..504 score: 9.914011
None	No IPR available	PROSITE	PS50297	ANK_REP_REGION	coord: 307..329 score: 9.038475
None	No IPR available	CDD	cd18186	BTB_POZ_ZBTB_KLHL-like	coord: 788..877 e-value: 4.96299E-9 score: 52.1709

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
Contig_167	contig	Contig_167:58823..68436 +

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-09-29
Diamond blastp: OGS1.0 vs UniRef90	2022-09-16
OGS1.0 of Tribonema minus UTEX_B_3156	2021-06-17

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
jgi.p\|Trimin1\|353507	mRNA_16942	Tribonema minus UTEX_B_3156	mRNA	Contig_167 58823..68436 +

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>Trimin1|353507|estExt_Genemark1.C_Ctg_1670009 ID=Trimin1|353507|estExt_Genemark1.C_Ctg_1670009|Name=jgi.p|Trimin1|353507|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=1055bp
MTAVPAAATAATTDIAAASHASGDAPTPTAAAAGLSDYKLSTASALSDAL
KQRWKERWFLLASQRYAARQQQQRELAIMRSHDKPPPPPLPLTPPTKPQH
NGRSQQDSGSGSDDDSGSDAEQQRSTNQSTAAGAAARHRLQLGSRAGSGT
LAAAAVDLPLPKPTPAAWFAAVAAGGIQHVSAMLRMGAVLDWRLEDCRSS
TSGTLSLNGGGQDASGNAAAVGAAAGTRRRSSAAAAAAAAAVRRAAAAAA
AANTSAAAAHSVAGDSYPEASAANAAAAARGAAPGAAADERSAAAATSLS
AVAANFGGVTALHIAAAAGDAAMVQVLVDAAGVGLVSAKDKARRTPLHHA
AAAAGAARSDVAALRTWLLAPLRADVVSCEERSEGVGLSQAGGDLQRRGS
SCGLRTGAHAAAPALSAAAAAAGGGTSAGAVAAAAGEGTEPDTLSAEAEA
DASLEPAACMANAGECVAALLRHGARADAKDRSGRTPLHVAAALGNADAA
RALLGARGAAAKPVKGGHREVVAVLLGAGGLVDAPDERGVTPLTAAAVGG
DAELLMTLLAANQAKCWAASKPQQQQQQRAPQRTSTAAKRSRVGGVGGCG
LSALHEAAAAGQTACVAALLHYGMNPCAKEPGPEGNTPLGRALLAPNGPH
LDICAALLDHAGPPVLAVENAALETPLVLAARVPSDNPAAVRLLLRHCGG
DAADAKAVVNARSGHAETLTALSAALAAGNVRVTAALLQLGATMSLRALR
SAQLTPPAGAAAAPPPPLLSSNLLDLLDEPDRDSGGTSDVTLELQGGQQL
RCHSAILVAFSGYFARTLTAAEGAAAVDEPVVVPCYGWEAATVVTLVRCM
YAGMLVEPLRQASTDELVDLLHASHALGCSRTFVQVQHALGTWGHVTDAT
VVDLFQLAAAVTLSETFRDHAEHRPTAIMLSGSTTAAAVACDETAGLGLA
LGLQADSKAAILEAYCVAHVQRQALLGSGNSAKQQALRRRLQQIPVLNMA
DVSLKESELSCTAYLGTGLCHQWLSGQTGNKELQLKAKQQRISTSLDVTL
GRTV*

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR002110	Ankyrin_rpt
IPR036770	Ankyrin_rpt-contain_sf
IPR011333	SKP1/BTB/POZ_sf
IPR000210	BTB/POZ_dom