Trimin1|353427|estExt_Genemark1.C_Ctg_1620009 (polypeptide) Tribonema minus UTEX_B_3156

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
Namejgi.p|Trimin1|353427
Unique NameTrimin1|353427|estExt_Genemark1.C_Ctg_1620009
Typepolypeptide
OrganismTribonema minus UTEX_B_3156 (Tribonema minus UTEX_B_3156 )
Sequence length1199
Homology
BLAST of jgi.p|Trimin1|353427 vs. uniprot
Match: A0A836CIY7_9STRA (SMP-LTD domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CIY7_9STRA)

HSP 1 Score: 2032 bits (5265), Expect = 0.000e+0
Identity = 1155/1155 (100.00%), Postives = 1155/1155 (100.00%), Query Frame = 0
Query:    1 MLRRLLSLSLLWIPCSKASSLPSFAPRLPVAANLTLVLADSVAAGDNADVTQVSKARLLFDTDDDLSQRXXXXXXRSELGTAPAGKSQLQREGKVVFGKLFKVSRHASHGVCRAVNVTGTTAATVAGSLFKLAGAAVMDASQGLEYAQARACAAAPMKVPVLDKGVTLVAKSLKKSGDFVYRLGELAENATTEAVGMAEDAVRYLMEGTIDNVEDTTSLLLQLDDEDEEYDAFFRSVDARIIEHVVETSQPRRGARAGWRRRLRSAVKASMTAGATPSMRLQSFLACAGVLGVSARLYLKAVEGVYAEALGESIMQGIRYEAVARYXXXXXXXXXXXXAGVPERARWLNTLADTIWQPILEPALSGVLQRRLNIVMARSLPSNITWAGITKFTLGTRPPRLHYILLQSYDQMVAGMGSNSVKRSIAAAVACGDVAAKDIVYLEAGVHVCDREAYXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXWDFVSQDSKVTVKLALPRKHSHWWSVFLSSYMPAYRVKASALQIQGKVAMGFQVRPGPPFLRRIWLTFLETPPRVRFAVEAVRGMDLSSVPILRRALQHTVYKGLAPLCDPSASXXXXXXXXXXXXXXXXXXXXXXXXXKREWEEQQAQLGHRNHQVGRHKHPPDPGDASQSPLQLVPADASDXXXXXXXXXXXXXXXEEVESGVAFHLIEQEDLVAAFAALGADLPNRKALAGTMLNKEHDRVSRDVWEAIDALHLGGSYFVTTEPARGVCKNAEWIEELHMRWAKKVTRGNLDRLLGMVMDNTKANRKALDLMKQKHPTWLLLGCQAHALALLIKDLHGEKNARCDWSKKAYGKALMMSNTINGSETIHSALREQQKFKYGKVKAVRSHCPTRFAILHFICSDLLDSEEAIKLMVGDRSWGKVSEGTTHAAAFTTAATVEPARGRAAAYXXXDEAAALKKLVQPVSDAIHQVESDKPLLSQMLPIWKQLLQHAADFDDHIDNVERSPVLPLFERRYNTHFDKSWPAAYVLDPVYAYKGTDTRQAESALSACHGHVGYAVQLLTLQEGGADEQALMALEHAMMLEAVQASIEHPPTDLEVAAAVEHCSGDEEQARILLRSDPLELAAAVVMANTDVSDAVCRALTAKHGIPVVRIYEPGASASNISSSIG 1155
            MLRRLLSLSLLWIPCSKASSLPSFAPRLPVAANLTLVLADSVAAGDNADVTQVSKARLLFDTDDDLSQRXXXXXXRSELGTAPAGKSQLQREGKVVFGKLFKVSRHASHGVCRAVNVTGTTAATVAGSLFKLAGAAVMDASQGLEYAQARACAAAPMKVPVLDKGVTLVAKSLKKSGDFVYRLGELAENATTEAVGMAEDAVRYLMEGTIDNVEDTTSLLLQLDDEDEEYDAFFRSVDARIIEHVVETSQPRRGARAGWRRRLRSAVKASMTAGATPSMRLQSFLACAGVLGVSARLYLKAVEGVYAEALGESIMQGIRYEAVARYXXXXXXXXXXXXAGVPERARWLNTLADTIWQPILEPALSGVLQRRLNIVMARSLPSNITWAGITKFTLGTRPPRLHYILLQSYDQMVAGMGSNSVKRSIAAAVACGDVAAKDIVYLEAGVHVCDREAYXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXWDFVSQDSKVTVKLALPRKHSHWWSVFLSSYMPAYRVKASALQIQGKVAMGFQVRPGPPFLRRIWLTFLETPPRVRFAVEAVRGMDLSSVPILRRALQHTVYKGLAPLCDPSASXXXXXXXXXXXXXXXXXXXXXXXXXKREWEEQQAQLGHRNHQVGRHKHPPDPGDASQSPLQLVPADASDXXXXXXXXXXXXXXXEEVESGVAFHLIEQEDLVAAFAALGADLPNRKALAGTMLNKEHDRVSRDVWEAIDALHLGGSYFVTTEPARGVCKNAEWIEELHMRWAKKVTRGNLDRLLGMVMDNTKANRKALDLMKQKHPTWLLLGCQAHALALLIKDLHGEKNARCDWSKKAYGKALMMSNTINGSETIHSALREQQKFKYGKVKAVRSHCPTRFAILHFICSDLLDSEEAIKLMVGDRSWGKVSEGTTHAAAFTTAATVEPARGRAAAYXXXDEAAALKKLVQPVSDAIHQVESDKPLLSQMLPIWKQLLQHAADFDDHIDNVERSPVLPLFERRYNTHFDKSWPAAYVLDPVYAYKGTDTRQAESALSACHGHVGYAVQLLTLQEGGADEQALMALEHAMMLEAVQASIEHPPTDLEVAAAVEHCSGDEEQARILLRSDPLELAAAVVMANTDVSDAVCRALTAKHGIPVVRIYEPGASASNISSSIG
Sbjct:    1 MLRRLLSLSLLWIPCSKASSLPSFAPRLPVAANLTLVLADSVAAGDNADVTQVSKARLLFDTDDDLSQRXXXXXXRSELGTAPAGKSQLQREGKVVFGKLFKVSRHASHGVCRAVNVTGTTAATVAGSLFKLAGAAVMDASQGLEYAQARACAAAPMKVPVLDKGVTLVAKSLKKSGDFVYRLGELAENATTEAVGMAEDAVRYLMEGTIDNVEDTTSLLLQLDDEDEEYDAFFRSVDARIIEHVVETSQPRRGARAGWRRRLRSAVKASMTAGATPSMRLQSFLACAGVLGVSARLYLKAVEGVYAEALGESIMQGIRYEAVARYXXXXXXXXXXXXAGVPERARWLNTLADTIWQPILEPALSGVLQRRLNIVMARSLPSNITWAGITKFTLGTRPPRLHYILLQSYDQMVAGMGSNSVKRSIAAAVACGDVAAKDIVYLEAGVHVCDREAYXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXWDFVSQDSKVTVKLALPRKHSHWWSVFLSSYMPAYRVKASALQIQGKVAMGFQVRPGPPFLRRIWLTFLETPPRVRFAVEAVRGMDLSSVPILRRALQHTVYKGLAPLCDPSASXXXXXXXXXXXXXXXXXXXXXXXXXKREWEEQQAQLGHRNHQVGRHKHPPDPGDASQSPLQLVPADASDXXXXXXXXXXXXXXXEEVESGVAFHLIEQEDLVAAFAALGADLPNRKALAGTMLNKEHDRVSRDVWEAIDALHLGGSYFVTTEPARGVCKNAEWIEELHMRWAKKVTRGNLDRLLGMVMDNTKANRKALDLMKQKHPTWLLLGCQAHALALLIKDLHGEKNARCDWSKKAYGKALMMSNTINGSETIHSALREQQKFKYGKVKAVRSHCPTRFAILHFICSDLLDSEEAIKLMVGDRSWGKVSEGTTHAAAFTTAATVEPARGRAAAYXXXDEAAALKKLVQPVSDAIHQVESDKPLLSQMLPIWKQLLQHAADFDDHIDNVERSPVLPLFERRYNTHFDKSWPAAYVLDPVYAYKGTDTRQAESALSACHGHVGYAVQLLTLQEGGADEQALMALEHAMMLEAVQASIEHPPTDLEVAAAVEHCSGDEEQARILLRSDPLELAAAVVMANTDVSDAVCRALTAKHGIPVVRIYEPGASASNISSSIG 1155          
BLAST of jgi.p|Trimin1|353427 vs. uniprot
Match: A0A836CL52_9STRA (Major facilitator superfamily domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CL52_9STRA)

HSP 1 Score: 651 bits (1679), Expect = 2.510e-211
Identity = 327/327 (100.00%), Postives = 327/327 (100.00%), Query Frame = 0
Query:  683 EEVESGVAFHLIEQEDLVAAFAALGADLPNRKALAGTMLNKEHDRVSRDVWEAIDALHLGGSYFVTTEPARGVCKNAEWIEELHMRWAKKVTRGNLDRLLGMVMDNTKANRKALDLMKQKHPTWLLLGCQAHALALLIKDLHGEKNARCDWSKKAYGKALMMSNTINGSETIHSALREQQKFKYGKVKAVRSHCPTRFAILHFICSDLLDSEEAIKLMVGDRSWGKVSEGTTHAAAFTTAATVEPARGRAAAYXXXDEAAALKKLVQPVSDAIHQVESDKPLLSQMLPIWKQLLQHAADFDDHIDNVERSPVLPLFERRYNTHFDKS 1009
            EEVESGVAFHLIEQEDLVAAFAALGADLPNRKALAGTMLNKEHDRVSRDVWEAIDALHLGGSYFVTTEPARGVCKNAEWIEELHMRWAKKVTRGNLDRLLGMVMDNTKANRKALDLMKQKHPTWLLLGCQAHALALLIKDLHGEKNARCDWSKKAYGKALMMSNTINGSETIHSALREQQKFKYGKVKAVRSHCPTRFAILHFICSDLLDSEEAIKLMVGDRSWGKVSEGTTHAAAFTTAATVEPARGRAAAYXXXDEAAALKKLVQPVSDAIHQVESDKPLLSQMLPIWKQLLQHAADFDDHIDNVERSPVLPLFERRYNTHFDKS
Sbjct:  225 EEVESGVAFHLIEQEDLVAAFAALGADLPNRKALAGTMLNKEHDRVSRDVWEAIDALHLGGSYFVTTEPARGVCKNAEWIEELHMRWAKKVTRGNLDRLLGMVMDNTKANRKALDLMKQKHPTWLLLGCQAHALALLIKDLHGEKNARCDWSKKAYGKALMMSNTINGSETIHSALREQQKFKYGKVKAVRSHCPTRFAILHFICSDLLDSEEAIKLMVGDRSWGKVSEGTTHAAAFTTAATVEPARGRAAAYXXXDEAAALKKLVQPVSDAIHQVESDKPLLSQMLPIWKQLLQHAADFDDHIDNVERSPVLPLFERRYNTHFDKS 551          
BLAST of jgi.p|Trimin1|353427 vs. uniprot
Match: A0A835Z0G7_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z0G7_9STRA)

HSP 1 Score: 459 bits (1182), Expect = 7.010e-147
Identity = 224/225 (99.56%), Postives = 225/225 (100.00%), Query Frame = 0
Query:  683 EEVESGVAFHLIEQEDLVAAFAALGADLPNRKALAGTMLNKEHDRVSRDVWEAIDALHLGGSYFVTTEPARGVCKNAEWIEELHMRWAKKVTRGNLDRLLGMVMDNTKANRKALDLMKQKHPTWLLLGCQAHALALLIKDLHGEKNARCDWSKKAYGKALMMSNTINGSETIHSALREQQKFKYGKVKAVRSHCPTRFAILHFICSDLLDSEEAIKLMVGDRSWG 907
            EEVESGVAFHLIEQEDLVAAFAALGADLPNRKALAGTMLNKEHDRVSRDVWEAIDALHLGGSYFVTTEPARGVCKNAEWIEELHMRWAKKVTRGNLDRLLGMVMDNTKANRKALDLMKQKHPTWLLLGCQAHALALLIKDLHGEKNARCDWS+KAYGKALMMSNTINGSETIHSALREQQKFKYGKVKAVRSHCPTRFAILHFICSDLLDSEEAIKLMVGDRSWG
Sbjct:   40 EEVESGVAFHLIEQEDLVAAFAALGADLPNRKALAGTMLNKEHDRVSRDVWEAIDALHLGGSYFVTTEPARGVCKNAEWIEELHMRWAKKVTRGNLDRLLGMVMDNTKANRKALDLMKQKHPTWLLLGCQAHALALLIKDLHGEKNARCDWSRKAYGKALMMSNTINGSETIHSALREQQKFKYGKVKAVRSHCPTRFAILHFICSDLLDSEEAIKLMVGDRSWG 264          
BLAST of jgi.p|Trimin1|353427 vs. uniprot
Match: A0A835ZKJ1_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZKJ1_9STRA)

HSP 1 Score: 461 bits (1185), Expect = 4.530e-144
Identity = 225/225 (100.00%), Postives = 225/225 (100.00%), Query Frame = 0
Query:  683 EEVESGVAFHLIEQEDLVAAFAALGADLPNRKALAGTMLNKEHDRVSRDVWEAIDALHLGGSYFVTTEPARGVCKNAEWIEELHMRWAKKVTRGNLDRLLGMVMDNTKANRKALDLMKQKHPTWLLLGCQAHALALLIKDLHGEKNARCDWSKKAYGKALMMSNTINGSETIHSALREQQKFKYGKVKAVRSHCPTRFAILHFICSDLLDSEEAIKLMVGDRSWG 907
            EEVESGVAFHLIEQEDLVAAFAALGADLPNRKALAGTMLNKEHDRVSRDVWEAIDALHLGGSYFVTTEPARGVCKNAEWIEELHMRWAKKVTRGNLDRLLGMVMDNTKANRKALDLMKQKHPTWLLLGCQAHALALLIKDLHGEKNARCDWSKKAYGKALMMSNTINGSETIHSALREQQKFKYGKVKAVRSHCPTRFAILHFICSDLLDSEEAIKLMVGDRSWG
Sbjct:  368 EEVESGVAFHLIEQEDLVAAFAALGADLPNRKALAGTMLNKEHDRVSRDVWEAIDALHLGGSYFVTTEPARGVCKNAEWIEELHMRWAKKVTRGNLDRLLGMVMDNTKANRKALDLMKQKHPTWLLLGCQAHALALLIKDLHGEKNARCDWSKKAYGKALMMSNTINGSETIHSALREQQKFKYGKVKAVRSHCPTRFAILHFICSDLLDSEEAIKLMVGDRSWG 592          
BLAST of jgi.p|Trimin1|353427 vs. uniprot
Match: A0A6H5LP07_9PHAE (SMP-LTD domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5LP07_9PHAE)

HSP 1 Score: 240 bits (613), Expect = 2.340e-61
Identity = 194/622 (31.19%), Postives = 281/622 (45.18%), Query Frame = 0
Query:   76 RSELGTAPAGKSQLQREGKVVFGKLFKVSRHASHGVCRAVNVTGTTAATVAGSLFKLAGAAVMDASQGLEYAQARACAAAPMKVPVLDKGVTLVAKSLKKSGDFVYRLGELAENATTEAVGMAEDAVRYLMEGTIDNVEDTTSLLLQLDDEDEEYDAFFRSVDARIIEHVVETSQPR------------------------------------------RGARAG----------------WRR----------------------RLRSAVKASM--TAGATPSMRLQSFLACAGVLG---------------VSARLYLKAVEGVYAEALGESIMQGIRYEAVARYXXXXXXXXXXXXAGVPERARWLNTLADTIWQPILEPALSGVLQRRLNIVMARSLPSNITWAGITKFTLGTRPPRLHYILLQSYDQMVA--GMG-SNSVKRSIA--AAVACGDVAAKDIVYLEAGVHVCDREAYXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXWDFVSQDSKVTVKLALPRKHSHWWSVFLSSYMPAYRVKASALQIQGKVAMGFQVRPGPPFLRRIWLTFLETPPRVRFAVEAVRGMDLSSVPILRRALQHTVYKGLAPLCDP 595
            RS+   + +G+S+L+REG  +   L  V+   ++G+ RAVNVTGT A+ VAG  FKLAGAAV+DA     +                      VAK L+K+ + VY  G  AEN T EA  +AE+ +R ++ G++ N     S        D +   +F   + RII+++V    P                                           R AR G                W++                      R R A++ S+  T+ A P+MR    +ACA V                 V AR+YLK VE +Y E L E +   I++EAVAR              G PERARW NT    +W P+LEP LSG   R++   + RSLPSN++W G+ K TLG  PP++ Y+ +Q+   +     MG SN +  S+   A    G++A ++IVYLE GV                                       D+ S  SKV++KL    +  +WWS  LSSY+P YRVK   L I+GKV +   V  G PF++R+W+ F E PP    ++EA+ GMD++++P+LR+ L+H V + L PL +P
Sbjct:  132 RSKRTMSNSGRSRLRREGDSLLRSLKTVTTRTTNGLARAVNVTGTAASVVAGGAFKLAGAAVLDAVDTWRF----------------------VAKGLRKTAETVYDFGVAAENVTAEATEVAEETIRSVV-GSVINPASPGS--------DAQTRGYFSEEEDRIIDNMVFGMPPAXXXXXXXXXXXXXXXXXXXXXXHVSGGSNMGYSEGDLATHFGRDARRGHHHHDSGRPYAHQQHQWQQGLLTGGPGGLRRRQPRLLALAARARYAIRLSIMRTSKAVPTMRFPQMVACAMVFACRAVTKNPWCGAASFVGARMYLKFVESIYLECLKERMTSDIKFEAVARLHE-----------GSPERARWFNTAVAAMWVPMLEPLLSGWTSRQITRGIERSLPSNVSWVGLGKVTLGPTPPKIRYVQVQNVTSLAQRRNMGTSNGIIDSVLLEAGQPGGEIAGENIVYLEVGV---------------------------------------DWTSSRSKVSLKLGEQSRRRNWWS--LSSYVPTYRVKLCDLGIKGKVVVAMAVGDGRPFVKRLWVGFSE-PPLTHMSLEALSGMDIANLPVLRKHLRHVVMRCLMPLTEP 669          
BLAST of jgi.p|Trimin1|353427 vs. uniprot
Match: D8UJ57_VOLCA (Uncharacterized protein n=1 Tax=Volvox carteri f. nagariensis TaxID=3068 RepID=D8UJ57_VOLCA)

HSP 1 Score: 202 bits (514), Expect = 7.570e-50
Identity = 129/362 (35.64%), Postives = 197/362 (54.42%), Query Frame = 0
Query:  687 SGVAFHLIEQEDLVAAFAALGADLPNRKALAGTMLNKEHDRVSRDV-----------------WEAIDA-----------LHLGGSYFVTTEPARGVCKNAEWIEELHMRW-AKKVTRGNLDRLLGMVMDNTKANRKALDLMKQKHPTWLLLGCQAHALALLIKDLHGEKNARCDWSKKAYGKALMMSNTINGSETIHSALREQQKFKYGKVKAVRSHCPTRFAILHFICSDLLDSEEAIKLMVGDR-SWGKVSEGTTHAAAFTTAATVEPARGRAAAYXXXDEAAALKKLVQPVSDAIHQVESDKPLLSQMLPIWKQLLQHAADFDDHIDNVERSPVLPLFERRYNTHFDKSWPAAYVLDP 1018
            + V  HLIE+ +L   F  LG  LPNRK L G ML++ + +V   V                 W    A           L   GS F+    A GV K+A++I+++H+   A+  T+   D  +G VMDNT  N  A+ L++ ++P WL +GC  H +AL+ KDL  EKN +  W+ K +  ++ +S  +  SE I + L   Q  KYGK  A+ ++ PTRFA+ +F+ SD+L +E+A+K MV ++ +W   S+GT+ A  F   A VE   G +       + A L +  +P+S A+H++E D+P+LSQM P+WK LL  A DFD+   N +   +  L +RRY+   +  W AA++LDP
Sbjct:  314 NNVPIHLIEKPELRNLFGLLGVTLPNRKQLMGPMLDRAYSKVKAQVAQVRQRMCGQAALCSDGWRKRAAEQGVPLINFMLLLPTGSAFLRVVRAAGVRKDAQYIKKIHLDVVAEAFTKP--DDCIGFVMDNTATNLAAIQLLRIENPRWLGVGCGVHGMALVFKDLAKEKNVK--WAAKIFNASITISTVVGDSERIRALLGVHQMEKYGKKSAITANTPTRFAVNYFVLSDVLANEDALKAMVRNKEAWAGASDGTSKAQEFK--AMVE-GEGSSRNLGLFSKGAKLAEFCEPISKALHKLECDRPMLSQMYPVWKALLATARDFDEA--NTDCPGLYDLLKRRYDKQVNACWFAAFLLDP 666          
BLAST of jgi.p|Trimin1|353427 vs. uniprot
Match: A0A835T0K3_CHLIN (Uncharacterized protein n=1 Tax=Chlamydomonas incerta TaxID=51695 RepID=A0A835T0K3_CHLIN)

HSP 1 Score: 185 bits (469), Expect = 1.690e-45
Identity = 124/369 (33.60%), Postives = 184/369 (49.86%), Query Frame = 0
Query:  685 VESGVAFHLIEQEDLVAAFAALGADLPNRKALAGTMLNKEHDRVSRDV-------------------WEA---------IDALHL---GGSYFVTTEPARGVCKNAEWIEELHMRWAKKVTRGNLDRLLGMVMDNTKANRKALDLMKQKHPTWLLLGCQAHALALLIKDLHGEKNARCDWSKKAYGKALMMSNTINGSETIHSALREQQKFKYGKVKAVRSHCPTRFAILHFICSDLLDSEEAIKLMVGDRSWG-KVSEGTTHAAAFTTAATVEPARGRAAAYXXXDEAAALKKLVQPVSDAIHQVESDKPLLSQMLPIWKQLLQHAADFDDHIDNVERSPVLPLFERRYNTHFDKSWPAAYVLDPVYA 1021
            + S   F  +E E L  A +  G  LP+R A A T LN   ++V + V                   W+          ++A  L   GG+ F+    A GV  NA W+ E  M  A +   GN   +LG++ DNT AN  A+ +M++++P  + LGC AHALALLIKDL  EK+A      K  G A  ++N IN SE++ + L + Q     K  A+  H P+RFA + F+   +L +  AI+ MV   +W  KV++     A F   A               ++  ++ +L++PV DAIHQVE+D+PLLSQ+LP+W  ++ H  ++        R  V   F  R N HF  +W +A++LDP YA
Sbjct:   57 ITSETPFTRLENEWLKKAASIAGIQLPSRHAAATTHLNALFEKVKKKVGGELVDLAKGPSLQMSFDGWKKKAANQGEPLVNAKALKPNGGAIFLCVVRAAGVTNNAAWLAETMMEKALEAVGGNASNVLGVLCDNTSANLNAMQMMEEENPGMVNLGCVAHALALLIKDLAKEKHA--SGVAKVLGNANDVANCINDSESLRAFLHQHQVEVMAKTFAIDVHSPSRFAGIFFVLESVLRNRPAIRSMVMSEAWDEKVADNAKAKAVFADVAREN----------WSNKCQSVSRLIKPVCDAIHQVEADRPLLSQVLPVWNAIIDHVDEWHAAAPAALRLGVKARFLFRLNKHFHPAWASAHLLDPAYA 413          
BLAST of jgi.p|Trimin1|353427 vs. uniprot
Match: A8JJ05_CHLRE (Predicted protein (Fragment) n=2 Tax=Chlamydomonas reinhardtii TaxID=3055 RepID=A8JJ05_CHLRE)

HSP 1 Score: 182 bits (462), Expect = 2.410e-44
Identity = 128/365 (35.07%), Postives = 183/365 (50.14%), Query Frame = 0
Query:  689 VAFHLIEQEDLVAAFAALGADLPNRKALAGTMLNKEHD-----------------RVSRDVWEAIDALH-----------LGGSYFVTTEPARGVCKNAEWIEELHMRWAKK----VTRGNLDRLLGMVMDNTKANRKALDLMKQKHPTWLLLGCQAHALALLIKDLHGEKNARCDWSKKAYGKALMMSNTINGSETIHSALREQQKFKYGKVKAVRSHCPTRFAILHFICSDLLDSEEAIKLMVGDRSWGKVSEGTTHAAAFTTAATVEPARGRAAAYXXXDEAAALKKLVQPVSDAIHQVESDKPLLSQMLPIWKQLLQHAADFDDHIDNVERSPVLPLFERRY-NTHFDKSWPAAYVLDPVY 1020
            +A HLIE  +LVAA AA+G  LP RK LA TML++ +                   ++ D W +  AL               + F     A GV K+A WI + H++ A      V +G  D+ LG +MDNTKANRKA+         W+ +GC AH  +L  KDL  E+  +C W+       LMMS  IN +E I + L       YG+VK +  H PTRFA   FI  DLLD++ +++ +    SW   S  +T+A  F  A      R  +  +   +   A  +L QPVSD I Q+E+D  +LSQ+ P+  QL  H   F++    ++   VL LF++RY +T    +  AAY+LDP+Y
Sbjct:  133 IALHLIEHPNLVAACAAVGIILPGRKKLATTMLDEAYTDLKSELEKVEEADGGLAAIATDGWRSRVALTGTPLINVMKLLFNRAIFCKVIAAAGVVKDAPWIAQQHIKLAADAQFGVFKGCADKCLGFIMDNTKANRKAM---------WICVGCVAHGFSLFFKDLSDER--KCSWTAGVVSAMLMMSLLINSAERIRALLHTVMATVYGRVKGITVHAPTRFACQLFIARDLLDAKASLRELCLHTSWEDASASSTNADQFRNAVLAN--RPYSNLWYKME---AYVELAQPVSDTIRQLEADASMLSQVYPVATQLRAHVKAFEEKHPTLKG--VLSLFDKRYESTIRSPAMLAAYLLDPIY 479          
BLAST of jgi.p|Trimin1|353427 vs. uniprot
Match: A0A835YKE6_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YKE6_9STRA)

HSP 1 Score: 165 bits (417), Expect = 9.520e-43
Identity = 86/115 (74.78%), Postives = 87/115 (75.65%), Query Frame = 0
Query:  686 ESGVAFHLIEQEDLVAAFAALGADLPNRKALAGTMLNKEHDRVSRDVWEAIDALHL----------------------------GGSYFVTTEPARGVCKNAEWIEELHMRWAKK 772
            +SGVAFHLIEQEDLVAAFAALGADLPNRKALAGTMLNKEHDRVSRDVWEAIDALHL                            GGSYFVTTEPARGVCKNAEWIEELHMRWAKK
Sbjct:   20 KSGVAFHLIEQEDLVAAFAALGADLPNRKALAGTMLNKEHDRVSRDVWEAIDALHLVQLASDGWRRKHCGDGTPLVNLCALLPKGGSYFVTTEPARGVCKNAEWIEELHMRWAKK 134          
BLAST of jgi.p|Trimin1|353427 vs. uniprot
Match: A0A836CDK4_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CDK4_9STRA)

HSP 1 Score: 140 bits (352), Expect = 6.940e-33
Identity = 86/219 (39.27%), Postives = 118/219 (53.88%), Query Frame = 0
Query:  791 ANRKALDLMKQKHPTWLLLGCQAHALALLIKDLHGEKNARCDWSKKAYGKALMMSNTINGSETIHSALR-EQQKFKYGKVKAVRSHCPTRFAILHFICSDLLDSEEAIKLMV-----------GDR-----SWGKVSEGTTHAAAFTTAATVEPARGRAAAYXXXDEAAALKKLVQPVSDAIHQVESDKPLLSQMLPIWKQLLQHAADFDDHIDNVERS 992
            +N  A+ L+K  HP W++LGC AH L LLIKDL   K +   W  K Y  A+ MSNTIN ++ + +AL   QQ+   GK +A+  H PTRF  +HF+C +L      IK MV           GDR     SW  VS+   H  +F  AA    A G+A  +     A AL   + P+ DAIHQ+E+DKPLLS +LP W +++     F++  D+   S
Sbjct:   82 SNPAAIKLLKADHPGWIMLGCTAHHLNLLIKDLASAKRSAHPWLVKVYDTAIEMSNTINNADKVRAALDFHQQRCGDGKARAISRHTPTRFGTMHFVCKNLYRERAPIKAMVIAGDEDGGSDEGDREELAPSWAAVSKDCEHKISFKDAAL--GAAGQAQVWLAMGLATAL---ISPMCDAIHQLEADKPLLSWLLPTWVKIVCQVRAFEEQHDDKTSS 295          
The following BLAST results are available for this feature:
BLAST of jgi.p|Trimin1|353427 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A836CIY7_9STRA0.000e+0100.00SMP-LTD domain-containing protein n=1 Tax=Tribonem... [more]
A0A836CL52_9STRA2.510e-211100.00Major facilitator superfamily domain-containing pr... [more]
A0A835Z0G7_9STRA7.010e-14799.56Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A835ZKJ1_9STRA4.530e-144100.00Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A6H5LP07_9PHAE2.340e-6131.19SMP-LTD domain-containing protein n=2 Tax=Ectocarp... [more]
D8UJ57_VOLCA7.570e-5035.64Uncharacterized protein n=1 Tax=Volvox carteri f. ... [more]
A0A835T0K3_CHLIN1.690e-4533.60Uncharacterized protein n=1 Tax=Chlamydomonas ince... [more]
A8JJ05_CHLRE2.410e-4435.07Predicted protein (Fragment) n=2 Tax=Chlamydomonas... [more]
A0A835YKE6_9STRA9.520e-4374.78Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A836CDK4_9STRA6.940e-3339.27Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1152..1171
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1152..1186
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 65..84
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 628..679
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 64..85
NoneNo IPR availablePANTHERPTHR32166OSJNBA0013A04.12 PROTEINcoord: 759..1012
NoneNo IPR availablePANTHERPTHR32166:SF92F16P17.2 PROTEINcoord: 759..1012
IPR031468Synaptotagmin-like mitochondrial-lipid-binding domainPROSITEPS51847SMPcoord: 341..603
score: 11.10744
IPR012337Ribonuclease H-like superfamilySUPERFAMILY53098Ribonuclease H-likecoord: 744..1022

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Contig_162contigContig_162:35391..59562 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Tribonema minus UTEX_B_31562021-06-17
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
jgi.p|Trimin1|353427mRNA_16454Tribonema minus UTEX_B_3156 mRNAContig_162 35391..59563 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Trimin1|353427|estExt_Genemark1.C_Ctg_1620009 ID=Trimin1|353427|estExt_Genemark1.C_Ctg_1620009|Name=jgi.p|Trimin1|353427|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=1199bp
MLRRLLSLSLLWIPCSKASSLPSFAPRLPVAANLTLVLADSVAAGDNADV
TQVSKARLLFDTDDDLSQRQQQQQQRSELGTAPAGKSQLQREGKVVFGKL
FKVSRHASHGVCRAVNVTGTTAATVAGSLFKLAGAAVMDASQGLEYAQAR
ACAAAPMKVPVLDKGVTLVAKSLKKSGDFVYRLGELAENATTEAVGMAED
AVRYLMEGTIDNVEDTTSLLLQLDDEDEEYDAFFRSVDARIIEHVVETSQ
PRRGARAGWRRRLRSAVKASMTAGATPSMRLQSFLACAGVLGVSARLYLK
AVEGVYAEALGESIMQGIRYEAVARYQGICYEAVARYQAGVPERARWLNT
LADTIWQPILEPALSGVLQRRLNIVMARSLPSNITWAGITKFTLGTRPPR
LHYILLQSYDQMVAGMGSNSVKRSIAAAVACGDVAAKDIVYLEAGVHVCD
REAYGIGATALSCAVLATIVCSGVADEDIMYMEAWDFVSQDSKVTVKLAL
PRKHSHWWSVFLSSYMPAYRVKASALQIQGKVAMGFQVRPGPPFLRRIWL
TFLETPPRVRFAVEAVRGMDLSSVPILRRALQHTVYKGLAPLCDPSASLS
SVPILRRALQHTVYKGLAPLCDPKREWEEQQAQLGHRNHQVGRHKHPPDP
GDASQSPLQLVPADASDGDSAAAAAAAAGDGEEEVESGVAFHLIEQEDLV
AAFAALGADLPNRKALAGTMLNKEHDRVSRDVWEAIDALHLGGSYFVTTE
PARGVCKNAEWIEELHMRWAKKVTRGNLDRLLGMVMDNTKANRKALDLMK
QKHPTWLLLGCQAHALALLIKDLHGEKNARCDWSKKAYGKALMMSNTING
SETIHSALREQQKFKYGKVKAVRSHCPTRFAILHFICSDLLDSEEAIKLM
VGDRSWGKVSEGTTHAAAFTTAATVEPARGRAAAYYFFDEAAALKKLVQP
VSDAIHQVESDKPLLSQMLPIWKQLLQHAADFDDHIDNVERSPVLPLFER
RYNTHFDKSWPAAYVLDPVYAYKGTDTRQAESALSACHGHVGYAVQLLTL
QEGGADEQALMALEHAMMLEAVQASIEHPPTDLEVAAAVEHCSGDEEQAR
ILLRSDPLELAAAVVMANTDVSDAVCRALTAKHGIPVVRIYEPGASASNI
SSSIGGSSDGGGTSSSKKSSSKSLLHPKRVKAAKGGAAAAAATPVGQV*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR031468SMP_LBD
IPR012337RNaseH-like_sf