Trimin1|353289|estExt_Genemark1.C_Ctg_1540034 (polypeptide) Tribonema minus UTEX_B_3156

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
Namejgi.p|Trimin1|353289
Unique NameTrimin1|353289|estExt_Genemark1.C_Ctg_1540034
Typepolypeptide
OrganismTribonema minus UTEX_B_3156 (Tribonema minus UTEX_B_3156 )
Sequence length349
Homology
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BLAST of jgi.p|Trimin1|353289 vs. uniprot
Match: A0A835ZB02_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZB02_9STRA)

HSP 1 Score: 669 bits (1727), Expect = 1.130e-242
Identity = 348/348 (100.00%), Postives = 348/348 (100.00%), Query Frame = 0 
Query:    1 MPFGAPQQHGYASFPPATPFMVPPPPPMMPFARAPPVDAPAWEQSSSRARSQDAHMRTDSDEEAIAKHEIDLLTAGPSCVPYSNAGGRLGDAHPDASGLGDAAQLLIECGIKCGIIENVVQALRTDTWASAERALHASGNPAYQGHTRVQLAKLSSALQAAASKQALAAIQPSDEELNDHLGTATHTFDVVEDDLVVEQGVMVGGTSRDSHNARSDLRAIVDTLITEAISDAPTEKGPAMVTVEVDYREPVDLGSYEGKIVAERRNKKARKKAAESTAGNNQVLSGNDMDCREVENAFGQVGALQRLTLSAQLLTERHVSIERLDDDDDYLVDNSALCALEFNVAAGY 348
            MPFGAPQQHGYASFPPATPFMVPPPPPMMPFARAPPVDAPAWEQSSSRARSQDAHMRTDSDEEAIAKHEIDLLTAGPSCVPYSNAGGRLGDAHPDASGLGDAAQLLIECGIKCGIIENVVQALRTDTWASAERALHASGNPAYQGHTRVQLAKLSSALQAAASKQALAAIQPSDEELNDHLGTATHTFDVVEDDLVVEQGVMVGGTSRDSHNARSDLRAIVDTLITEAISDAPTEKGPAMVTVEVDYREPVDLGSYEGKIVAERRNKKARKKAAESTAGNNQVLSGNDMDCREVENAFGQVGALQRLTLSAQLLTERHVSIERLDDDDDYLVDNSALCALEFNVAAGY
Sbjct:    1 MPFGAPQQHGYASFPPATPFMVPPPPPMMPFARAPPVDAPAWEQSSSRARSQDAHMRTDSDEEAIAKHEIDLLTAGPSCVPYSNAGGRLGDAHPDASGLGDAAQLLIECGIKCGIIENVVQALRTDTWASAERALHASGNPAYQGHTRVQLAKLSSALQAAASKQALAAIQPSDEELNDHLGTATHTFDVVEDDLVVEQGVMVGGTSRDSHNARSDLRAIVDTLITEAISDAPTEKGPAMVTVEVDYREPVDLGSYEGKIVAERRNKKARKKAAESTAGNNQVLSGNDMDCREVENAFGQVGALQRLTLSAQLLTERHVSIERLDDDDDYLVDNSALCALEFNVAAGY 348
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BLAST of jgi.p|Trimin1|353289 vs. uniprot
Match: A0A836CG46_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CG46_9STRA)

HSP 1 Score: 125 bits (313), Expect = 8.620e-29
Identity = 66/82 (80.49%), Postives = 73/82 (89.02%), Query Frame = 0 
Query:  165 QALAAIQPSDEELNDHLGTATHTFDVVEDDLVVEQGVMVGGTSRDSHNARSDLRAIVDTLITEAISDAPTEKGPAMVTVEVD 246
            +ALAAIQPSDEEL+DH G ATHTFDVVEDDL VEQ V+VGG SRDS NARS+LRA+VDTLITEAISDAPTE  PAMVT+E +
Sbjct:  327 KALAAIQPSDEELSDHPGLATHTFDVVEDDLGVEQEVIVGGISRDSDNARSELRAVVDTLITEAISDAPTEGEPAMVTIECE 408
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BLAST of jgi.p|Trimin1|353289 vs. uniprot
Match: A0A836CBT4_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CBT4_9STRA)

HSP 1 Score: 106 bits (264), Expect = 2.010e-21
Identity = 56/84 (66.67%), Postives = 66/84 (78.57%), Query Frame = 0 
Query:  163 SKQALAAIQPSDEELNDHLGTATHTFDVVEDDLVVEQGVMVGGTSRDSHNARSDLRAIVDTLITEAISDAPTEKGPAMVTVEVD 246
            S +AL   QPSD +L+D  G ATHTF V+EDD  V Q V++GG SRDS NARS+LRAIVDTLITE ISDAP+E GPAMVT++ D
Sbjct:  660 SAKALTGCQPSDVDLHDDPGMATHTFSVIEDDFGVAQEVIIGGASRDSDNARSELRAIVDTLITENISDAPSEGGPAMVTIKND 743
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BLAST of jgi.p|Trimin1|353289 vs. uniprot
Match: A0A835YVG1_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YVG1_9STRA)

HSP 1 Score: 55.1 bits (131), Expect = 4.530e-5
Identity = 24/42 (57.14%), Postives = 32/42 (76.19%), Query Frame = 0 
Query:  307 LTLSAQLLTERHVSIERLDDDDDYLVDNSALCALEFNVAAGY 348
            L ++  ++T+   SIERLDD +DY V+NSALCALEFN  AG+
Sbjct:   43 LPVNFAMMTDSQASIERLDDQEDYFVENSALCALEFNTVAGW 84
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BLAST of jgi.p|Trimin1|353289 vs. uniprot
Match: A0A836CFM0_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CFM0_9STRA)

HSP 1 Score: 55.5 bits (132), Expect = 7.900e-5
Identity = 34/97 (35.05%), Postives = 55/97 (56.70%), Query Frame = 0 
Query:  255 SYEGKIVAERRNKKARKKAAESTAGNNQVLSGNDMDCREVENAFGQVG---ALQRLTLSAQLLTERHVSIERLDDDDDYLVDNSALCALEFNVAAGY 348
            +Y  ++  ERR  K   +AA+      + ++ N++    V++             L +  + +++   S+ERL++DDDYLV NSALCALEFNVAAG+
Sbjct:  265 AYTQQLAEERRAAKRAAEAAKQQRSEKRGMNKNELTAGIVDSICCTQNDRCIYSGLPVKFERMSDWQASLERLNNDDDYLVGNSALCALEFNVAAGW 361
The following BLAST results are available for this feature:
BLAST of jgi.p|Trimin1|353289 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 5
Match NameE-valueIdentityDescription
A0A835ZB02_9STRA1.130e-242100.00Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A836CG46_9STRA8.620e-2980.49Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A836CBT4_9STRA2.010e-2166.67Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A835YVG1_9STRA4.530e-557.14Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A836CFM0_9STRA7.900e-535.05Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR029063S-adenosyl-L-methionine-dependent methyltransferase superfamilyGENE3D3.40.50.150Vaccinia Virus protein VP39coord: 38..160
e-value: 1.1E-10
score: 43.0
IPR029063S-adenosyl-L-methionine-dependent methyltransferase superfamilySUPERFAMILY53335S-adenosyl-L-methionine-dependent methyltransferasescoord: 65..149
IPR001525C-5 cytosine methyltransferasePFAMPF00145DNA_methylasecoord: 58..128
e-value: 1.1E-4
score: 21.7
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 35..68
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 50..68

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Contig_154contigContig_154:314709..330264 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Tribonema minus UTEX_B_31562021-06-17
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
jgi.p|Trimin1|353289mRNA_16337Tribonema minus UTEX_B_3156 mRNAContig_154 314709..334422 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Trimin1|353289|estExt_Genemark1.C_Ctg_1540034 ID=Trimin1|353289|estExt_Genemark1.C_Ctg_1540034|Name=jgi.p|Trimin1|353289|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=349bp
MPFGAPQQHGYASFPPATPFMVPPPPPMMPFARAPPVDAPAWEQSSSRAR
SQDAHMRTDSDEEAIAKHEIDLLTAGPSCVPYSNAGGRLGDAHPDASGLG
DAAQLLIECGIKCGIIENVVQALRTDTWASAERALHASGNPAYQGHTRVQ
LAKLSSALQAAASKQALAAIQPSDEELNDHLGTATHTFDVVEDDLVVEQG
VMVGGTSRDSHNARSDLRAIVDTLITEAISDAPTEKGPAMVTVEVDYREP
VDLGSYEGKIVAERRNKKARKKAAESTAGNNQVLSGNDMDCREVENAFGQ
VGALQRLTLSAQLLTERHVSIERLDDDDDYLVDNSALCALEFNVAAGY*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR029063SAM-dependent_MTases_sf
IPR001525C5_MeTfrase