Trimin1|353282|estExt_Genemark1.C_Ctg_1540004 (polypeptide) Tribonema minus UTEX_B_3156

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
Namejgi.p|Trimin1|353282
Unique NameTrimin1|353282|estExt_Genemark1.C_Ctg_1540004
Typepolypeptide
OrganismTribonema minus UTEX_B_3156 (Tribonema minus UTEX_B_3156 )
Sequence length424
Homology
BLAST of jgi.p|Trimin1|353282 vs. uniprot
Match: A0A836CJV4_9STRA (Regulator of Vps4 activity in the MVB pathway-domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CJV4_9STRA)

HSP 1 Score: 706 bits (1822), Expect = 1.250e-254
Identity = 423/423 (100.00%), Postives = 423/423 (100.00%), Query Frame = 0
Query:    1 MTSILKAVGIGFDGPKTKAYLKMSMQRLQMHINKKTNSVEMCKREVARLLGEGKEDKARIRVEQIIRDDATRGAYEILELQCDLLVQRMRYIESQSTLPTDLLEAISTIIWAADRTEAEELSKVKDQFAKKYGRETMQRAMRNEIEMXXXXXXXXXXXXECGCMNPKYGXXXPKVAEQLSVEPPSNFLVQSYLVEIAKEFSVDWKPAAEAVDLRTGLTSSAMAAKQAASSQVFASERQQGMPVEAQLAAAADCGAAEEDAEAETEALRTKNVPQPQRALAAPQRRQAAAYAPPASELQQQPQXXXXYXXXXXXXXXXXXXXXXXXXXXXEGNGANAGYLPQQGSAYLGTAAGYPTHQLGPVHPRPASGREVPMDEPMAPPAKEAYSLPSQGLNGDADGGMSPPAEGKIVQEGTLHFTSGRSAE 423
            MTSILKAVGIGFDGPKTKAYLKMSMQRLQMHINKKTNSVEMCKREVARLLGEGKEDKARIRVEQIIRDDATRGAYEILELQCDLLVQRMRYIESQSTLPTDLLEAISTIIWAADRTEAEELSKVKDQFAKKYGRETMQRAMRNEIEMXXXXXXXXXXXXECGCMNPKYGXXXPKVAEQLSVEPPSNFLVQSYLVEIAKEFSVDWKPAAEAVDLRTGLTSSAMAAKQAASSQVFASERQQGMPVEAQLAAAADCGAAEEDAEAETEALRTKNVPQPQRALAAPQRRQAAAYAPPASELQQQPQXXXXYXXXXXXXXXXXXXXXXXXXXXXEGNGANAGYLPQQGSAYLGTAAGYPTHQLGPVHPRPASGREVPMDEPMAPPAKEAYSLPSQGLNGDADGGMSPPAEGKIVQEGTLHFTSGRSAE
Sbjct:    1 MTSILKAVGIGFDGPKTKAYLKMSMQRLQMHINKKTNSVEMCKREVARLLGEGKEDKARIRVEQIIRDDATRGAYEILELQCDLLVQRMRYIESQSTLPTDLLEAISTIIWAADRTEAEELSKVKDQFAKKYGRETMQRAMRNEIEMXXXXXXXXXXXXECGCMNPKYGXXXPKVAEQLSVEPPSNFLVQSYLVEIAKEFSVDWKPAAEAVDLRTGLTSSAMAAKQAASSQVFASERQQGMPVEAQLAAAADCGAAEEDAEAETEALRTKNVPQPQRALAAPQRRQAAAYAPPASELQQQPQXXXXYXXXXXXXXXXXXXXXXXXXXXXEGNGANAGYLPQQGSAYLGTAAGYPTHQLGPVHPRPASGREVPMDEPMAPPAKEAYSLPSQGLNGDADGGMSPPAEGKIVQEGTLHFTSGRSAE 423          
BLAST of jgi.p|Trimin1|353282 vs. uniprot
Match: D8LKW4_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LKW4_ECTSI)

HSP 1 Score: 184 bits (468), Expect = 3.270e-50
Identity = 101/208 (48.56%), Postives = 139/208 (66.83%), Query Frame = 0
Query:    1 MTSILKAVGIGFDGPKTKAYLKMSMQRLQMHINKKTNSVEMCKREVARLLGEGKEDKARIRVEQIIRDDATRGAYEILELQCDLLVQRMRYIESQSTLPTDLLEAISTIIWAADRTEAEELSKVKDQFAKKYGRETMQRAMRNEIEMXXXXXXXXXXXXECGCMNPKYGXXXPKVAEQLSVEPPSNFLVQSYLVEIAKEFSVDWKPAA 208
            MTS+LK  G+ FD  K K +LKMS+ RL + +NKK N +++ K+E+ARLL +GKE+KARI+VEQ+IR+D T  AY++LEL C+L+ +RMR + SQ  +P D+ +A+ TIIWAADR E  ELS VK QF KKYG E ++ A  NE                 GC+NPK       V E+L  +PPS+F+V  YL+ IA+E+ V++ PAA
Sbjct:    1 MTSLLKKAGLVFDENKVKPFLKMSITRLNLLVNKKANHIKISKKEIARLLADGKEEKARIKVEQVIREDFTIEAYDVLELHCELVAERMRLVASQKDVPPDMEQAVCTIIWAADRAEVSELSTVKSQFVKKYGSEYVRLAELNEG----------------GCVNPK-------VVEKLDCQPPSSFVVTEYLLGIAEEYDVEYTPAA 185          
BLAST of jgi.p|Trimin1|353282 vs. uniprot
Match: A0A8J4SI40_9STRA (Uncharacterized protein n=2 Tax=Phytophthora kernoviae TaxID=325452 RepID=A0A8J4SI40_9STRA)

HSP 1 Score: 162 bits (409), Expect = 1.020e-43
Identity = 95/196 (48.47%), Postives = 126/196 (64.29%), Query Frame = 0
Query:   11 GFDGPKTKAYLKMSMQRLQMHINKKTNSVEMCKREVARLLGEGKEDKARIRVEQIIRDDATRGAYEILELQCDLLVQRMRYIESQSTLPTDLLEAISTIIWAADRTEAEELSKVKDQFAKKYGRETMQRAMRNEIEMXXXXXXXXXXXXECGCMNPKYGXXXPKVAEQLSVEPPSNFLVQSYLVEIAKEFSVDWKP 206
            GF+  K K  LKM++ R+ +  NKK N+    ++EVARLLG+GKE+KARIRVE IIRDD T   YEILEL C+LL +R   I+++S  P D+ EA+ T+IWAA RTE  EL++VK Q  KKYG++    A+RN                  GC+N +       V ++LSV+PPS FLV +Y+ EIAKEF VDW+P
Sbjct:    3 GFNVNKLKPNLKMAVHRIGIVKNKKANAAVAQRKEVARLLGDGKEEKARIRVEGIIRDDFTMEGYEILELLCELLAERANLIKTESDCPYDMREAVCTLIWAASRTEIPELAEVKKQLTKKYGQDFEAAAIRNVD----------------GCVNER-------VIQKLSVQPPSAFLVVNYMKEIAKEFKVDWEP 175          
BLAST of jgi.p|Trimin1|353282 vs. uniprot
Match: A0A7S1XZY1_9STRA (Hypothetical protein (Fragment) n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1XZY1_9STRA)

HSP 1 Score: 162 bits (411), Expect = 1.050e-42
Identity = 99/224 (44.20%), Postives = 136/224 (60.71%), Query Frame = 0
Query:    1 MTSILKAVGIGFDGPKTKAYLKMSMQRLQMHINKKTNSVEMCKREVARLLGEGKEDKARIRVEQIIRDDATRGAYEILELQCDLLVQRMRYIESQSTLPTDLLEAISTIIWAADRTEAEELSKVKDQFAKKYGRETMQRAMRNEIEMXXXXXXXXXXXXECGCMNPKYGXXXPKVAEQLSVEPPSNFLVQSYLVEIAKEFSVDWKPA-AEAVDLRTGLTSSAMA 223
            M+S + A+G+GF+  K K  L+M + RL ++INKKTN V+  +REV  LL E KE+KARIRVE +IR+D T  AYEIL L C+LL +R+R ++++   P DL+EA+ T+IWA DR E  EL  ++ QF KKYG E ++ A  N                   C+N +       V  +L V PPS  LV++YL EIAKE+ V+W P  AE  D+ T  T +A A
Sbjct:   49 MSSFMAAIGLGFNVNKAKPALQMCVSRLNININKKTNQVKAKRREVGMLLREQKEEKARIRVEAVIREDFTIEAYEILALLCELLTERIRLVDAKEECPPDLMEAVCTLIWATDRAEISELEVIRSQFRKKYGAEFVKDAQDNIGS----------------CVNDR-------VVVKLGVNPPSALLVEAYLREIAKEYGVEWAPPEAELADIETLATQAAPA 249          
BLAST of jgi.p|Trimin1|353282 vs. uniprot
Match: A0A6V2VRX8_HETAK (Hypothetical protein (Fragment) n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6V2VRX8_HETAK)

HSP 1 Score: 156 bits (394), Expect = 1.400e-41
Identity = 92/202 (45.54%), Postives = 125/202 (61.88%), Query Frame = 0
Query:    8 VGIGFDGPKTKAYLKMSMQRLQMHINKKTNSVEMCKREVARLLGEGKEDKARIRVEQIIRDDATRGAYEILELQCDLLVQRMRYIESQSTLPTDLLEAISTIIWAADRTEAEELSKVKDQFAKKYGRETMQRAMRNEIEMXXXXXXXXXXXXECGCMNPKYGXXXPKVAEQLSVEPPSNFLVQSYLVEIAKEFSVDWKPAAE 209
            +G GF+  K K++LKM+  R+QM INKK N++++ +REVA +L EGKE+KARIRVE +IRD+ T  AYEIL L  +LL +RMR IE+ S  P DL+E +ST+I+AADR +  E  +VK Q  KKYG+     A  N                  G      G    +V  +LS++PPS FLV +YL E+A +  VDW+PA E
Sbjct:    2 LGFGFNSGKLKSHLKMANTRMQMSINKKNNAIKVGRREVAGMLAEGKEEKARIRVEPLIRDENTIEAYEILSLISELLAERMRLIEANSQCPPDLVEGVSTLIYAADRVDIPEFIEVKKQLVKKYGKTVANTAAGN-----------------IG------GVCNERVVNKLSIQPPSAFLVVNYLQELAVQHEVDWEPAGE 180          
BLAST of jgi.p|Trimin1|353282 vs. uniprot
Match: H3H3Z6_PHYRM (Uncharacterized protein n=1 Tax=Phytophthora ramorum TaxID=164328 RepID=H3H3Z6_PHYRM)

HSP 1 Score: 159 bits (402), Expect = 1.450e-41
Identity = 94/196 (47.96%), Postives = 125/196 (63.78%), Query Frame = 0
Query:   11 GFDGPKTKAYLKMSMQRLQMHINKKTNSVEMCKREVARLLGEGKEDKARIRVEQIIRDDATRGAYEILELQCDLLVQRMRYIESQSTLPTDLLEAISTIIWAADRTEAEELSKVKDQFAKKYGRETMQRAMRNEIEMXXXXXXXXXXXXECGCMNPKYGXXXPKVAEQLSVEPPSNFLVQSYLVEIAKEFSVDWKP 206
            GF+  K K  LKM++ R+ +  NKK N+    +REVARLL +GKE+KARIRVE IIRDD T   YEILEL C+LL +R   I++++  P D+ EA+ T+IWAA RTE  EL++VK Q  KKYG++    A+RN                  GC+N +       V ++LSV+PPS FLV +Y+ EIAKEF VDW+P
Sbjct:    3 GFNVNKLKPNLKMAVHRIGIVKNKKANAALAQRREVARLLADGKEEKARIRVEGIIRDDFTMEGYEILELLCELLAERANLIKTEADCPYDMREAVCTLIWAASRTEIPELAEVKKQLTKKYGQDFEAAAIRNVD----------------GCVNER-------VIQKLSVQPPSAFLVVNYMKEIAKEFKVDWEP 175          
BLAST of jgi.p|Trimin1|353282 vs. uniprot
Match: A0A3M6V913_9STRA (Uncharacterized protein n=1 Tax=Peronospora effusa TaxID=542832 RepID=A0A3M6V913_9STRA)

HSP 1 Score: 158 bits (399), Expect = 5.270e-41
Identity = 94/196 (47.96%), Postives = 123/196 (62.76%), Query Frame = 0
Query:   11 GFDGPKTKAYLKMSMQRLQMHINKKTNSVEMCKREVARLLGEGKEDKARIRVEQIIRDDATRGAYEILELQCDLLVQRMRYIESQSTLPTDLLEAISTIIWAADRTEAEELSKVKDQFAKKYGRETMQRAMRNEIEMXXXXXXXXXXXXECGCMNPKYGXXXPKVAEQLSVEPPSNFLVQSYLVEIAKEFSVDWKP 206
            GF+  K K  LKM++ R+ +  NKK N+    +REVARLLG+GKE+KARIRVE IIRDD T   YEILEL C+LL +R   ++++   P D+ EA+ T+IW+A RTE  EL +VK Q  KKYGR+    A+RN  +                C+N +       V ++LSV PPS FLV SY+ EIAKEF VDW+P
Sbjct:    3 GFNVNKLKPNLKMAVHRIGIVKNKKANAAVAQRREVARLLGDGKEEKARIRVEGIIRDDFTMEGYEILELLCELLAERANLLQTEPDCPYDMREAVCTLIWSASRTEIPELLEVKKQLTKKYGRDFEAAAIRNVDK----------------CVNER-------VIQKLSVHPPSAFLVISYMQEIAKEFKVDWEP 175          
BLAST of jgi.p|Trimin1|353282 vs. uniprot
Match: A0A662WI25_9STRA (Uncharacterized protein n=1 Tax=Nothophytophthora sp. Chile5 TaxID=2483409 RepID=A0A662WI25_9STRA)

HSP 1 Score: 157 bits (398), Expect = 6.540e-41
Identity = 93/195 (47.69%), Postives = 124/195 (63.59%), Query Frame = 0
Query:   11 GFDGPKTKAYLKMSMQRLQMHINKKTNSVEMCKREVARLLGEGKEDKARIRVEQIIRDDATRGAYEILELQCDLLVQRMRYIESQSTLPTDLLEAISTIIWAADRTEAEELSKVKDQFAKKYGRETMQRAMRNEIEMXXXXXXXXXXXXECGCMNPKYGXXXPKVAEQLSVEPPSNFLVQSYLVEIAKEFSVDWK 205
            GF+  K K  LKM++ R+ +  NKK N+    +REVARLLG+GKE+KARIRVE IIRDD T   YEILEL C+L+ +R   ++S+S  P D+ EA+ T+IWAA RTE  EL +VK Q  KKYG++    A+RN                  GC+N +       V ++LSV+PPS FLV +Y+ EIAK+F VDW+
Sbjct:    3 GFNVNKLKPNLKMAVHRIGIVKNKKANAAVAQRREVARLLGDGKEEKARIRVEGIIRDDFTMEGYEILELLCELIAERANLVKSESECPYDMREAVCTLIWAASRTEIPELVEVKKQLTKKYGQDFEAAAIRNVD----------------GCVNER-------VIQKLSVQPPSAFLVVNYMNEIAKQFKVDWE 174          
BLAST of jgi.p|Trimin1|353282 vs. uniprot
Match: A0A329RFB1_9STRA (Uncharacterized protein n=2 Tax=Phytophthora TaxID=4783 RepID=A0A329RFB1_9STRA)

HSP 1 Score: 157 bits (398), Expect = 6.860e-41
Identity = 93/196 (47.45%), Postives = 124/196 (63.27%), Query Frame = 0
Query:   11 GFDGPKTKAYLKMSMQRLQMHINKKTNSVEMCKREVARLLGEGKEDKARIRVEQIIRDDATRGAYEILELQCDLLVQRMRYIESQSTLPTDLLEAISTIIWAADRTEAEELSKVKDQFAKKYGRETMQRAMRNEIEMXXXXXXXXXXXXECGCMNPKYGXXXPKVAEQLSVEPPSNFLVQSYLVEIAKEFSVDWKP 206
            GF+  K K  LKM++ R+ +  NKK N+    +REV RLL +GKE+KARIRVE IIRDD T   YEILEL C+LL +R   I++++  P D+ EA+ T+IWAA RTE  EL++VK Q  KKYG++    A+RN                  GC+N +       V ++LSV+PPS FLV +Y+ EIAKEF VDW+P
Sbjct:    3 GFNVNKLKPNLKMAVHRIGIVKNKKANAALAQRREVGRLLADGKEEKARIRVEGIIRDDFTMEGYEILELLCELLAERANLIKTEADCPYDMREAVCTLIWAASRTEIPELAEVKKQLTKKYGQDFEAAAIRNVD----------------GCVNER-------VIQKLSVQPPSAFLVVNYMKEIAKEFKVDWEP 175          
BLAST of jgi.p|Trimin1|353282 vs. uniprot
Match: D0P3K3_PHYIT (Uncharacterized protein n=1 Tax=Phytophthora infestans (strain T30-4) TaxID=403677 RepID=D0P3K3_PHYIT)

HSP 1 Score: 157 bits (398), Expect = 7.020e-41
Identity = 92/196 (46.94%), Postives = 125/196 (63.78%), Query Frame = 0
Query:   11 GFDGPKTKAYLKMSMQRLQMHINKKTNSVEMCKREVARLLGEGKEDKARIRVEQIIRDDATRGAYEILELQCDLLVQRMRYIESQSTLPTDLLEAISTIIWAADRTEAEELSKVKDQFAKKYGRETMQRAMRNEIEMXXXXXXXXXXXXECGCMNPKYGXXXPKVAEQLSVEPPSNFLVQSYLVEIAKEFSVDWKP 206
            GF+  K K  LKM++ R+ +  +KK N+ +  +REV RLL +GKE+KARIRVE IIRDD T   YEILEL C+LL +R   I++++  P D+ EA+ T+IWAA RTE  EL++VK Q  KKYG++    A+RN                  GC+N +       V ++LSV+PPS FLV +Y+ EIAKEF VDW+P
Sbjct:    3 GFNVNKLKPNLKMAVNRIGIVKDKKANAAQAQRREVGRLLADGKEEKARIRVEGIIRDDFTMEGYEILELLCELLAERANLIKTEADCPYDMREAVCTLIWAASRTEIPELAEVKKQLTKKYGQDFEAAAIRNVD----------------GCVNER-------VIQKLSVQPPSAFLVVNYMKEIAKEFKVDWEP 175          
The following BLAST results are available for this feature:
BLAST of jgi.p|Trimin1|353282 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A836CJV4_9STRA1.250e-254100.00Regulator of Vps4 activity in the MVB pathway-doma... [more]
D8LKW4_ECTSI3.270e-5048.56Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
A0A8J4SI40_9STRA1.020e-4348.47Uncharacterized protein n=2 Tax=Phytophthora kerno... [more]
A0A7S1XZY1_9STRA1.050e-4244.20Hypothetical protein (Fragment) n=1 Tax=Phaeomonas... [more]
A0A6V2VRX8_HETAK1.400e-4145.54Hypothetical protein (Fragment) n=1 Tax=Heterosigm... [more]
H3H3Z6_PHYRM1.450e-4147.96Uncharacterized protein n=1 Tax=Phytophthora ramor... [more]
A0A3M6V913_9STRA5.270e-4147.96Uncharacterized protein n=1 Tax=Peronospora effusa... [more]
A0A662WI25_9STRA6.540e-4147.69Uncharacterized protein n=1 Tax=Nothophytophthora ... [more]
A0A329RFB1_9STRA6.860e-4147.45Uncharacterized protein n=2 Tax=Phytophthora TaxID... [more]
D0P3K3_PHYIT7.020e-4146.94Uncharacterized protein n=1 Tax=Phytophthora infes... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR005061Vacuolar protein sorting-associated protein Ist1PFAMPF03398Ist1coord: 18..151
e-value: 2.9E-41
score: 141.1
IPR005061Vacuolar protein sorting-associated protein Ist1PANTHERPTHR12161IST1 FAMILY MEMBERcoord: 147..325
IPR005061Vacuolar protein sorting-associated protein Ist1PANTHERPTHR12161IST1 FAMILY MEMBERcoord: 13..144
IPR042277Vacuolar protein sorting-associated protein IST1-likeGENE3D1.20.1260.60coord: 8..212
e-value: 3.2E-56
score: 191.8
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 293..339
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 252..423
NoneNo IPR availablePANTHERPTHR12161:SF5IST1 HOMOLOGcoord: 13..144
NoneNo IPR availablePANTHERPTHR12161:SF5IST1 HOMOLOGcoord: 147..325

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Contig_154contigContig_154:41677..55407 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Tribonema minus UTEX_B_31562021-06-17
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
jgi.p|Trimin1|353282mRNA_16311Tribonema minus UTEX_B_3156 mRNAContig_154 41677..55407 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Trimin1|353282|estExt_Genemark1.C_Ctg_1540004 ID=Trimin1|353282|estExt_Genemark1.C_Ctg_1540004|Name=jgi.p|Trimin1|353282|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=424bp
MTSILKAVGIGFDGPKTKAYLKMSMQRLQMHINKKTNSVEMCKREVARLL
GEGKEDKARIRVEQIIRDDATRGAYEILELQCDLLVQRMRYIESQSTLPT
DLLEAISTIIWAADRTEAEELSKVKDQFAKKYGRETMQRAMRNEIEMYGR
ETVQRAMRNECGCMNPKYGCVNPKVAEQLSVEPPSNFLVQSYLVEIAKEF
SVDWKPAAEAVDLRTGLTSSAMAAKQAASSQVFASERQQGMPVEAQLAAA
ADCGAAEEDAEAETEALRTKNVPQPQRALAAPQRRQAAAYAPPASELQQQ
PQQQQQYQPQYEQQYQPQYQQPQQQQQQQEGNGANAGYLPQQGSAYLGTA
AGYPTHQLGPVHPRPASGREVPMDEPMAPPAKEAYSLPSQGLNGDADGGM
SPPAEGKIVQEGTLHFTSGRSAE*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR005061Ist1
IPR042277IST1-like