Trimin1|353168|estExt_Genemark1.C_Ctg_1470021 (polypeptide) Tribonema minus UTEX_B_3156

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
Namejgi.p|Trimin1|353168
Unique NameTrimin1|353168|estExt_Genemark1.C_Ctg_1470021
Typepolypeptide
OrganismTribonema minus UTEX_B_3156 (Tribonema minus UTEX_B_3156 )
Sequence length249
Homology
BLAST of jgi.p|Trimin1|353168 vs. uniprot
Match: A0A835Z7S8_9STRA (Thioredoxin-like protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z7S8_9STRA)

HSP 1 Score: 494 bits (1271), Expect = 1.580e-176
Identity = 248/248 (100.00%), Postives = 248/248 (100.00%), Query Frame = 0
Query:    1 MLRVFLLTVVFATYVQSSAGFIAGAKGAAAVWLRRPAVISRQHRLSMMAPNLPPAPLGYTMPHSSASPKVQVDFFFDLACPFAGRMYLTLQKVLPLYEGKGVLWKMYHVPQPWHPQSTLMHEAALAVNTVKPEAFFDFCHAVWTQREEKFIDDVTVDKTRNQIYDVLAEIAAEVGVEKEAVRQKLELKALGNMGTHMTQGIKFATQYHRKRGVHVTPTVFMNGIENGAISSSATVDEWKETLDALVAA 248
            MLRVFLLTVVFATYVQSSAGFIAGAKGAAAVWLRRPAVISRQHRLSMMAPNLPPAPLGYTMPHSSASPKVQVDFFFDLACPFAGRMYLTLQKVLPLYEGKGVLWKMYHVPQPWHPQSTLMHEAALAVNTVKPEAFFDFCHAVWTQREEKFIDDVTVDKTRNQIYDVLAEIAAEVGVEKEAVRQKLELKALGNMGTHMTQGIKFATQYHRKRGVHVTPTVFMNGIENGAISSSATVDEWKETLDALVAA
Sbjct:    1 MLRVFLLTVVFATYVQSSAGFIAGAKGAAAVWLRRPAVISRQHRLSMMAPNLPPAPLGYTMPHSSASPKVQVDFFFDLACPFAGRMYLTLQKVLPLYEGKGVLWKMYHVPQPWHPQSTLMHEAALAVNTVKPEAFFDFCHAVWTQREEKFIDDVTVDKTRNQIYDVLAEIAAEVGVEKEAVRQKLELKALGNMGTHMTQGIKFATQYHRKRGVHVTPTVFMNGIENGAISSSATVDEWKETLDALVAA 248          
BLAST of jgi.p|Trimin1|353168 vs. uniprot
Match: A0A7S4VHI0_9DINO (Hypothetical protein n=1 Tax=Alexandrium monilatum TaxID=311494 RepID=A0A7S4VHI0_9DINO)

HSP 1 Score: 172 bits (436), Expect = 3.270e-50
Identity = 93/205 (45.37%), Postives = 125/205 (60.98%), Query Frame = 0
Query:   48 MAPNLPPAPLGYTMPHSSASPKVQVDFFFDLACPFAGRMYLTLQKVLPLYEGKG---VLWKMYHVPQPWHPQSTLMHEAALAVNTVKPEAFFDFCHAVWTQREEKFIDDVTVDKTRNQIYDVLAEIAAE-VGVEKEAVRQKLELKALGNMGTHMTQGIKFATQYHRKRGVHVTPTVFMNGIENGAISSSATVDEWKETLDALVAA 248
            M P LPP PLG+    +   P++ V+ F DL CPF  +M   L+ V P  E      V W   +V QPWHPQS +MHEA LAV+T KPEA + +  AV   ++E F DD  +DK+R Q+Y+ LA +A E VG+ K  V   L L+  GN G+  TQ +K+ T+ HR RGVHVTPTVF+NG E   + S  + +EWK  L+ ++AA
Sbjct:    1 MGPPLPPGPLGHPYKAAEKPPRIVVELFLDLCCPFCKKMMTALKDVAPAVEASHPGQVQWLFCNVIQPWHPQSCMMHEAFLAVSTKKPEAAWPYAWAV-LDKQESFFDDQVMDKSRKQLYEELASVAEESVGLPKAEVLDVLALQGAGNAGSQATQLVKWYTKMHRVRGVHVTPTVFVNGTEAPQVGSGWSAEEWKAFLEPMLAA 204          
BLAST of jgi.p|Trimin1|353168 vs. uniprot
Match: A0A7S1WTV5_ALECA (Hypothetical protein n=1 Tax=Alexandrium catenella TaxID=2925 RepID=A0A7S1WTV5_ALECA)

HSP 1 Score: 166 bits (419), Expect = 1.190e-47
Identity = 89/205 (43.41%), Postives = 126/205 (61.46%), Query Frame = 0
Query:   48 MAPNLPPAPLGYTMPHSSASPKVQVDFFFDLACPFAGRMYLTLQKVLPLYEGK---GVLWKMYHVPQPWHPQSTLMHEAALAVNTVKPEAFFDFCHAVWTQREEKFIDDVTVDKTRNQIYDVLAEIA-AEVGVEKEAVRQKLELKALGNMGTHMTQGIKFATQYHRKRGVHVTPTVFMNGIENGAISSSATVDEWKETLDALVAA 248
            M P LPP PLG+    +   PK+ V+ F DL CPF+ +M +TL++V    E      V W   +V QPWHPQS +MHE  LAV+  K EA + F  A++  ++E F DD  +DK+R Q+Y+ +A IA + VGV K  V   L L+  GN G+ +TQ +K+ T+ HR RGVHVTPTVF+NG E   + S  + +EWK  ++ ++ A
Sbjct:    1 MGPPLPPGPLGHPFKAAERPPKIVVELFLDLCCPFSKKMMMTLKEVTAAVEASCPGQVQWLFCNVIQPWHPQSCMMHEVCLAVSAKKAEATWPFIWALF-DKQESFFDDQVMDKSRKQLYEEMAAIAESAVGVPKADVLGALALQGAGNSGSQVTQLVKWYTKMHRVRGVHVTPTVFVNGTEAPQVGSGWSAEEWKAFVEPMLTA 204          
BLAST of jgi.p|Trimin1|353168 vs. uniprot
Match: A0A813KXB5_POLGL (Hypothetical protein n=2 Tax=Polarella glacialis TaxID=89957 RepID=A0A813KXB5_POLGL)

HSP 1 Score: 162 bits (411), Expect = 1.540e-46
Identity = 88/194 (45.36%), Postives = 128/194 (65.98%), Query Frame = 0
Query:   52 LPPAPLGYTMPHSSASPKVQVDFFFDLACPFAGRMYLTLQK-VLPLYEGKGVLWKMYHVPQPWHPQSTLMHEAALAV-NTVKPEAFFDFCHAVWTQREEKFIDDVTVDKTRNQIYDVLAEIAAEVGVEKEAVRQKLELKALGNMGTHMTQGIKFATQYHRKRGVHVTPTVFMNGIENGAISSSATVDEWKETLD 243
            +P  P+G   P    +  V V+ F DL CP++ +M+ T+ + V P YEG+ V +  + V QPWH QS  MHEA+LAV ++  P+ F+DF  A++ ++EE F DD+ +DKTRN++Y  LA++A EVGV    V  +L+LK  GN G+ +TQ  K+AT+ HR RGVHVTPTV +NG+E G + S  + +EW+  LD
Sbjct:    1 MPSVPVGVARPGGQKA-SVTVELFLDLCCPYSNKMFKTISEHVAPKYEGE-VKFVFHSVAQPWHAQSCYMHEASLAVLDSAGPQKFWDFAGALFCKQEE-FFDDMVMDKTRNELYSELAKVAEEVGVAPAEVLNRLQLKP-GNAGSAVTQRFKWATKLHRSRGVHVTPTVHLNGLEAGVVGSGWSPEEWQSFLD 190          
BLAST of jgi.p|Trimin1|353168 vs. uniprot
Match: A0A7S1FB44_NOCSC (Hypothetical protein n=1 Tax=Noctiluca scintillans TaxID=2966 RepID=A0A7S1FB44_NOCSC)

HSP 1 Score: 156 bits (395), Expect = 4.170e-44
Identity = 85/199 (42.71%), Postives = 126/199 (63.32%), Query Frame = 0
Query:   52 LPPAPLGYTMPHSSASPKVQVDFFFDLACPFAGRMY-LTLQKVLPLYEGKGVLWKMYHVPQPWHPQSTLMHEAALAVNTVKPEAFFDFCHAVWTQREEKFIDDVTVDKTRNQIYDVLAEIAAEVGVEKEAVRQKLELKALG---NMGTHMTQGIKFATQYHRKRGVHVTPTVFMNGIENGAISSSATVDEWKETLDALV 246
            +P  PLG+ +   +A  +++++ F D  CPF  + +   + +VLPLY+ +G+ ++ Y+V QPWH QS+ MHEAALAV  V  + +  F  A++  +E+ F DD   DK+R  IY  L  +AA VGV+ EAV  KL  K +    N G  +TQ +KF T++HR RG+HVTPTV +NG+   +ISS  TV++W   LDAL+
Sbjct:    3 VPSRPLGHRLGDVTA--QIEIEAFLDFCCPFCRKHWNCFVLEVLPLYKDRGLNYRHYNVAQPWHAQSSYMHEAALAVEEVDADKYTAFATALFAAQEQ-FFDDAVWDKSRATIYQELCTLAASVGVDAEAVAAKLARKVVEGSHNTGNDVTQALKFYTKFHRTRGMHVTPTVMVNGVVEDSISSGWTVEQWTGYLDALL 198          
BLAST of jgi.p|Trimin1|353168 vs. uniprot
Match: A0A813G1E7_POLGL (Hypothetical protein n=1 Tax=Polarella glacialis TaxID=89957 RepID=A0A813G1E7_POLGL)

HSP 1 Score: 156 bits (395), Expect = 2.630e-43
Identity = 89/218 (40.83%), Postives = 129/218 (59.17%), Query Frame = 0
Query:   50 PNLPPAPLGYTMPHSSASPKVQVDFFFDLACPFAGRMYLTLQK-VLPLYEGKGVLWKM----------------------YHVPQPWHPQSTLMHEAALAV-NTVKPEAFFDFCHAVWTQREEKFIDDVTVDKTRNQIYDVLAEIAAEVGVEKEAVRQKLELKALGNMGTHMTQGIKFATQYHRKRGVHVTPTVFMNGIENGAISSSATVDEWKETLD 243
            P +P  P+G   P    +  V V+ F DL CP++ +M+ T+ + V P YEG+  L  +                      + V QPWH QS  MHEA+LAV ++  P+ F+DF  A++ ++EE F DD+ +DKTRN++Y  LA++A EVGV    V  +L+LK  GN G+ +TQ  K+AT+ HR RGVHVTPTV +NG+E G + S  + +EW+  LD
Sbjct:   43 PPMPSVPVGVARPGGQKA-SVTVELFLDLCCPYSNKMFKTISEHVAPKYEGEAGLMNICSLTQATLDMNKESLSQVKFVFHSVAQPWHAQSCYMHEASLAVLDSAGPQKFWDFAGALFCKQEE-FFDDMVMDKTRNELYSELAKVAEEVGVAPAEVLNRLQLKP-GNAGSAVTQRFKWATKLHRSRGVHVTPTVHLNGLEAGVVGSGWSPEEWQSFLD 257          
BLAST of jgi.p|Trimin1|353168 vs. uniprot
Match: R1CC22_EMIHU (Thioredoxin-like_fold domain-containing protein n=1 Tax=Emiliania huxleyi TaxID=2903 RepID=R1CC22_EMIHU)

HSP 1 Score: 149 bits (377), Expect = 1.660e-40
Identity = 80/204 (39.22%), Postives = 127/204 (62.25%), Query Frame = 0
Query:   45 LSMMAPNLPPAPLGYTMPHSSASPKVQVDFFFDLACPFAGRMYLTLQKVLPLYE-GKGVLWKMYHVPQPWHPQSTLMHEAALAVNTVKPEAFFDFCHAVWTQREE-KFIDDVTVDKTRNQIYDVLAEIAAEVGVEKEAVRQKLELKALG---NMGTHMTQGIKFATQYHRKRGVHVTPTVFMNGIENGAISSSATVDEWKETLD 243
            L +M P L P  +GY +  ++A+  V+V+ F DL CPF+ +M++TL +   +   G    + ++ VPQPWH Q + +HEAALAV  V P+ + ++  A++   ++ KF D  T +K+R QI   L ++AA VGV++ A   KL ++A     N+G  +TQ +K+  ++HR RGVHVTPTV +NG+E G +SS  T ++W   L+
Sbjct:   61 LRLMGPPLSPTAIGYVLNSAAAASPVRVEMFLDLICPFSRKMFVTLTEGRVIERAGDRACFVLHQVPQPWHAQGSYVHEAALAVKEVAPDLYPNYIGAIYECFDKGKFTDRDTWEKSRTQINAELCDLAASVGVDRAATAAKLAMRASADGNNVGNEVTQAVKWICKHHRTRGVHVTPTVHVNGLEAGIVSSGWTPEQWLAFLE 264          
BLAST of jgi.p|Trimin1|353168 vs. uniprot
Match: K8Z102_NANGC (Thioredoxin-like_fold domain-containing protein (Fragment) n=3 Tax=Monodopsidaceae TaxID=425072 RepID=K8Z102_NANGC)

HSP 1 Score: 147 bits (370), Expect = 2.170e-40
Identity = 80/196 (40.82%), Postives = 119/196 (60.71%), Query Frame = 0
Query:   51 NLPPAPLGYTMPHSSASPKVQVDFFFDLACPFAGRMYLTLQK--VLPLYEGKGVLWKMYHVPQPWHPQSTLMHEAALAVNTVKPEAFFDFCHAVWTQREEKFIDDVTVDKTRNQIYDVLAEIAAEVGVEKEAVRQKLELK--ALGNMGTHMTQGIKFATQYHRKRGVHVTPTVFMNGIENGAISSSATVDEWKETL 242
            ++PP P G     +  +PKV V+ F DL CP + R + TL +  ++  Y+ K V    ++V QPWH     MHEAALAV  ++P AF+ + + V+   E +F D  T + TR ++   L  +  E GV + A+ ++L L+  + GN GT  TQ +K+A +YHR+RGVHVTPTVF+NG+E   +SS+  V+EWK  L
Sbjct:    5 SIPPMPPGAAAAPALIAPKVVVEVFLDLNCPPSRRCFKTLYEGGIIEAYKDKAVQILFHNVIQPWHAVGAWMHEAALAVKDLQPSAFYPYANKVFDAME-RFSDVNTEEMTRKEVMAALIALGVEAGVPRPALEERLALQGGSSGNKGTATTQAVKWACKYHRRRGVHVTPTVFVNGLEASEVSSAWGVEEWKRLL 199          
BLAST of jgi.p|Trimin1|353168 vs. uniprot
Match: R1FWQ6_EMIHU (SAP domain-containing protein n=1 Tax=Emiliania huxleyi TaxID=2903 RepID=R1FWQ6_EMIHU)

HSP 1 Score: 149 bits (377), Expect = 2.560e-40
Identity = 80/204 (39.22%), Postives = 127/204 (62.25%), Query Frame = 0
Query:   45 LSMMAPNLPPAPLGYTMPHSSASPKVQVDFFFDLACPFAGRMYLTLQKVLPLYE-GKGVLWKMYHVPQPWHPQSTLMHEAALAVNTVKPEAFFDFCHAVWTQREE-KFIDDVTVDKTRNQIYDVLAEIAAEVGVEKEAVRQKLELKALG---NMGTHMTQGIKFATQYHRKRGVHVTPTVFMNGIENGAISSSATVDEWKETLD 243
            L +M P L P  +GY +  ++A+  V+V+ F DL CPF+ +M++TL +   +   G    + ++ VPQPWH Q + +HEAALAV  V P+ + ++  A++   ++ KF D  T +K+R QI   L ++AA VGV++ A   KL ++A     N+G  +TQ +K+  ++HR RGVHVTPTV +NG+E G +SS  T ++W   L+
Sbjct:   78 LRLMGPPLSPTAIGYVLNSAAAASPVRVEMFLDLICPFSRKMFVTLTEGRVIERAGDRACFVLHQVPQPWHAQGSYVHEAALAVKEVAPDLYPNYIGAIYECFDKGKFTDRDTWEKSRTQINAELCDLAASVGVDRAATAAKLAMRASADGNNVGNEVTQAVKWICKHHRTRGVHVTPTVHVNGLEAGIVSSGWTPEQWLAFLE 281          
BLAST of jgi.p|Trimin1|353168 vs. uniprot
Match: A0A7S3RBP5_9SPIT (Hypothetical protein (Fragment) n=1 Tax=Strombidinopsis acuminata TaxID=141414 RepID=A0A7S3RBP5_9SPIT)

HSP 1 Score: 146 bits (369), Expect = 3.340e-40
Identity = 87/177 (49.15%), Postives = 106/177 (59.89%), Query Frame = 0
Query:   50 PNLPPAPLGYTMPHSSASPKVQVDFFFDLACPFAGRMYLTLQKVLPLYEGKGVLWKMYHVP-------QPWHPQSTLMHEAALAVNTVK-PEAFFDFCHAVWTQREEKFIDDVTVDKTRNQIYDVLAEIAAEVGVEKEAVRQKLELKALGNMGTHMTQGIKFATQYHRKRGVHVTPT 218
            P +P  PLG      S  P   V+ F DL CPF+ +M+ TL        G GV+ KM  V        QPWHPQSTLMHEAALAV  V  P+ F++FC A++  ++E F DD   DK+R+QIY  L EIAA VGV+   V   L LK  GN G  +TQ IK+AT+ HR RGVHVTPT
Sbjct:   34 PPMPSRPLGVAYLRDSGRPAQVVELFLDLCCPFSKKMFNTLV-------GGGVISKMADVDFVFMPVVQPWHPQSTLMHEAALAVREVAGPQKFWEFCEALFA-KQENFFDDAVADKSRSQIYAELLEIAASVGVQTADVGALLALKGSGNAGNGVTQEIKWATKLHRVRGVHVTPT 202          
The following BLAST results are available for this feature:
BLAST of jgi.p|Trimin1|353168 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A835Z7S8_9STRA1.580e-176100.00Thioredoxin-like protein n=1 Tax=Tribonema minus T... [more]
A0A7S4VHI0_9DINO3.270e-5045.37Hypothetical protein n=1 Tax=Alexandrium monilatum... [more]
A0A7S1WTV5_ALECA1.190e-4743.41Hypothetical protein n=1 Tax=Alexandrium catenella... [more]
A0A813KXB5_POLGL1.540e-4645.36Hypothetical protein n=2 Tax=Polarella glacialis T... [more]
A0A7S1FB44_NOCSC4.170e-4442.71Hypothetical protein n=1 Tax=Noctiluca scintillans... [more]
A0A813G1E7_POLGL2.630e-4340.83Hypothetical protein n=1 Tax=Polarella glacialis T... [more]
R1CC22_EMIHU1.660e-4039.22Thioredoxin-like_fold domain-containing protein n=... [more]
K8Z102_NANGC2.170e-4040.82Thioredoxin-like_fold domain-containing protein (F... [more]
R1FWQ6_EMIHU2.560e-4039.22SAP domain-containing protein n=1 Tax=Emiliania hu... [more]
A0A7S3RBP5_9SPIT3.340e-4049.15Hypothetical protein (Fragment) n=1 Tax=Strombidin... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR012336Thioredoxin-like foldPFAMPF13462Thioredoxin_4coord: 69..243
e-value: 8.3E-9
score: 35.8
NoneNo IPR availableGENE3D3.40.30.10Glutaredoxincoord: 59..243
e-value: 1.3E-44
score: 154.4
NoneNo IPR availablePANTHERPTHR33875OS09G0542200 PROTEINcoord: 51..247
NoneNo IPR availableCDDcd02972DsbA_familycoord: 72..147
e-value: 2.5063E-6
score: 42.778
IPR036249Thioredoxin-like superfamilySUPERFAMILY52833Thioredoxin-likecoord: 67..247

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Contig_147contigContig_147:245482..251068 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Tribonema minus UTEX_B_31562021-06-17
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
jgi.p|Trimin1|353168mRNA_16829Tribonema minus UTEX_B_3156 mRNAContig_147 245445..251185 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Trimin1|353168|estExt_Genemark1.C_Ctg_1470021 ID=Trimin1|353168|estExt_Genemark1.C_Ctg_1470021|Name=jgi.p|Trimin1|353168|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=249bp
MLRVFLLTVVFATYVQSSAGFIAGAKGAAAVWLRRPAVISRQHRLSMMAP
NLPPAPLGYTMPHSSASPKVQVDFFFDLACPFAGRMYLTLQKVLPLYEGK
GVLWKMYHVPQPWHPQSTLMHEAALAVNTVKPEAFFDFCHAVWTQREEKF
IDDVTVDKTRNQIYDVLAEIAAEVGVEKEAVRQKLELKALGNMGTHMTQG
IKFATQYHRKRGVHVTPTVFMNGIENGAISSSATVDEWKETLDALVAA*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR012336Thioredoxin-like_fold
IPR036249Thioredoxin-like_sf