Trimin1|353112|estExt_Genemark1.C_Ctg_1450006 (polypeptide) Tribonema minus UTEX_B_3156

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	jgi.p\|Trimin1\|353112
Unique Name	Trimin1\|353112\|estExt_Genemark1.C_Ctg_1450006
Type	polypeptide
Organism	Tribonema minus UTEX_B_3156 (Tribonema minus UTEX_B_3156 )
Sequence length	1088

Homology

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BLAST of jgi.p|Trimin1|353112 vs. uniprot
Match: A0A835ZBX6_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZBX6_9STRA)

HSP 1 Score: 1484 bits (3841), Expect = 0.000e+0
Identity = 1087/1087 (100.00%), Postives = 1087/1087 (100.00%), Query Frame = 0

Query:    1 MGTDIKSMIARFRNNRPTSRQERARQRERGELQELWYINSRGGGASSGRASAPASPTGARRESAADDLRGSRSPLRQSARAQAMRTGLSVSADMSADSLHGSAQWPPAGAREGASSGAPGSSAAAERRWLRPEPPPHGRDFPKPVELRPEYLRRRGAPXXXXXXPLGSVRLSPERAGARAAPFVPRVAARGGRSPVELSSDSDDGGPAPRAPAWGPLLAAPPARYTGSLELRSSFPSRIIRPPRRSPRTTAAAKQAPPGDPQPKKEGAVCNAAAAALNADATAAGVSAELDLVMATLRGATLKGGLGLGLAGDDAGGFGGRAPFADFNGEVGEGAEGEGEWGGVSALRQVGESLDGALGGYLKAARERLEADEADARALKKWQDGERKRLQEELRREAAARLFEASLAAAHGLTHSDAGARPRAAAQRRLCVVAVFGAXXXXXXXXXXXXXXXXXXDAAAWRRSWGARLDLDPDLLAIGAPLQTHTLIAAPSRTRGSLSPPRRSSGGGSXXXXXXXXXXXXAELARQVSEVTEAVARRVREIEAIERGGGSSSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAVADVAXXAAAGNCDAAAGXXXXXXXXXXXXXXXXXKSMASAAAAVPPTDEALPEGSDAQSAVTDAVAAAAPLSQTAAXXXXXXXXXXXXXXXTTPKHPEMAAVHFDEDPXXXXXXXXXXXXXRLNATVLKGDRAWRERAYGAPPPPLSQVTREITADLEVTLLCVQRRLGDSGAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXALVEQLERATESXXXXXXXXXXXXXXXXXXXXPQRADAQLDAELAARGLWEQWIHAHHPLVGGGARGPPGGALPPAIKAPFGTSPHTCCSGGSHCLAEAAAXXXXXXXXXXAYRPMPYAPAEQGRAEARGEPWGGAAQASAPPAPPPSYLIEHAALSGDAGVRCMDAALRARDDRXXXXXXXXXXXXXXXXXXXXDEHARAVAELYGARPAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDPVASGRVALPADPRLRLQELRRLRQHYAAAAAANS 1087
            MGTDIKSMIARFRNNRPTSRQERARQRERGELQELWYINSRGGGASSGRASAPASPTGARRESAADDLRGSRSPLRQSARAQAMRTGLSVSADMSADSLHGSAQWPPAGAREGASSGAPGSSAAAERRWLRPEPPPHGRDFPKPVELRPEYLRRRGAPXXXXXXPLGSVRLSPERAGARAAPFVPRVAARGGRSPVELSSDSDDGGPAPRAPAWGPLLAAPPARYTGSLELRSSFPSRIIRPPRRSPRTTAAAKQAPPGDPQPKKEGAVCNAAAAALNADATAAGVSAELDLVMATLRGATLKGGLGLGLAGDDAGGFGGRAPFADFNGEVGEGAEGEGEWGGVSALRQVGESLDGALGGYLKAARERLEADEADARALKKWQDGERKRLQEELRREAAARLFEASLAAAHGLTHSDAGARPRAAAQRRLCVVAVFGAXXXXXXXXXXXXXXXXXXDAAAWRRSWGARLDLDPDLLAIGAPLQTHTLIAAPSRTRGSLSPPRRSSGGGSXXXXXXXXXXXXAELARQVSEVTEAVARRVREIEAIERGGGSSSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAVADVAXXAAAGNCDAAAGXXXXXXXXXXXXXXXXXKSMASAAAAVPPTDEALPEGSDAQSAVTDAVAAAAPLSQTAAXXXXXXXXXXXXXXXTTPKHPEMAAVHFDEDPXXXXXXXXXXXXXRLNATVLKGDRAWRERAYGAPPPPLSQVTREITADLEVTLLCVQRRLGDSGAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXALVEQLERATESXXXXXXXXXXXXXXXXXXXXPQRADAQLDAELAARGLWEQWIHAHHPLVGGGARGPPGGALPPAIKAPFGTSPHTCCSGGSHCLAEAAAXXXXXXXXXXAYRPMPYAPAEQGRAEARGEPWGGAAQASAPPAPPPSYLIEHAALSGDAGVRCMDAALRARDDRXXXXXXXXXXXXXXXXXXXXDEHARAVAELYGARPAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDPVASGRVALPADPRLRLQELRRLRQHYAAAAAANS
Sbjct:    1 MGTDIKSMIARFRNNRPTSRQERARQRERGELQELWYINSRGGGASSGRASAPASPTGARRESAADDLRGSRSPLRQSARAQAMRTGLSVSADMSADSLHGSAQWPPAGAREGASSGAPGSSAAAERRWLRPEPPPHGRDFPKPVELRPEYLRRRGAPXXXXXXPLGSVRLSPERAGARAAPFVPRVAARGGRSPVELSSDSDDGGPAPRAPAWGPLLAAPPARYTGSLELRSSFPSRIIRPPRRSPRTTAAAKQAPPGDPQPKKEGAVCNAAAAALNADATAAGVSAELDLVMATLRGATLKGGLGLGLAGDDAGGFGGRAPFADFNGEVGEGAEGEGEWGGVSALRQVGESLDGALGGYLKAARERLEADEADARALKKWQDGERKRLQEELRREAAARLFEASLAAAHGLTHSDAGARPRAAAQRRLCVVAVFGAXXXXXXXXXXXXXXXXXXDAAAWRRSWGARLDLDPDLLAIGAPLQTHTLIAAPSRTRGSLSPPRRSSGGGSXXXXXXXXXXXXAELARQVSEVTEAVARRVREIEAIERGGGSSSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAVADVAXXAAAGNCDAAAGXXXXXXXXXXXXXXXXXKSMASAAAAVPPTDEALPEGSDAQSAVTDAVAAAAPLSQTAAXXXXXXXXXXXXXXXTTPKHPEMAAVHFDEDPXXXXXXXXXXXXXRLNATVLKGDRAWRERAYGAPPPPLSQVTREITADLEVTLLCVQRRLGDSGAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXALVEQLERATESXXXXXXXXXXXXXXXXXXXXPQRADAQLDAELAARGLWEQWIHAHHPLVGGGARGPPGGALPPAIKAPFGTSPHTCCSGGSHCLAEAAAXXXXXXXXXXAYRPMPYAPAEQGRAEARGEPWGGAAQASAPPAPPPSYLIEHAALSGDAGVRCMDAALRARDDRXXXXXXXXXXXXXXXXXXXXDEHARAVAELYGARPAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDPVASGRVALPADPRLRLQELRRLRQHYAAAAAANS 1087

The following BLAST results are available for this feature:

BLAST of jgi.p|Trimin1|353112 vs. uniprot

BLAST of jgi.p|Trimin1|353112 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1


Match Name	E-value	Identity	Description
A0A835ZBX6_9STRA	0.000e+0	100.00	Uncharacterized protein n=1 Tax=Tribonema minus Ta...	[more]

InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 783..803
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 680..709
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 487..511
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..215
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 546..579
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 130..153
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1007..1065
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 75..98
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 487..504
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 803..830
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 16..34
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 234..267
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 803..818
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 913..938
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 687..704
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 618..646

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
Contig_145	contig	Contig_145:25114..32404 +

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-09-29
Diamond blastp: OGS1.0 vs UniRef90	2022-09-16
OGS1.0 of Tribonema minus UTEX_B_3156	2021-06-17

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
jgi.p\|Trimin1\|353112	mRNA_15191	Tribonema minus UTEX_B_3156	mRNA	Contig_145 25114..32525 +

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>Trimin1|353112|estExt_Genemark1.C_Ctg_1450006 ID=Trimin1|353112|estExt_Genemark1.C_Ctg_1450006|Name=jgi.p|Trimin1|353112|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=1088bp
MGTDIKSMIARFRNNRPTSRQERARQRERGELQELWYINSRGGGASSGRA
SAPASPTGARRESAADDLRGSRSPLRQSARAQAMRTGLSVSADMSADSLH
GSAQWPPAGAREGASSGAPGSSAAAERRWLRPEPPPHGRDFPKPVELRPE
YLRRRGAPPSSPPPPLGSVRLSPERAGARAAPFVPRVAARGGRSPVELSS
DSDDGGPAPRAPAWGPLLAAPPARYTGSLELRSSFPSRIIRPPRRSPRTT
AAAKQAPPGDPQPKKEGAVCNAAAAALNADATAAGVSAELDLVMATLRGA
TLKGGLGLGLAGDDAGGFGGRAPFADFNGEVGEGAEGEGEWGGVSALRQV
GESLDGALGGYLKAARERLEADEADARALKKWQDGERKRLQEELRREAAA
RLFEASLAAAHGLTHSDAGARPRAAAQRRLCVVAVFGAADSSDSSSSSSS
GVSGGGDAAAWRRSWGARLDLDPDLLAIGAPLQTHTLIAAPSRTRGSLSP
PRRSSGGGSGGALSGAAAAVAAELARQVSEVTEAVARRVREIEAIERGGG
SSSGGGSSGGAGGGSGGGGDGGGSSGGSGGDGRGGVAVADVAAAAAAGNC
DAAAGAAADAPAAVPAEPAAEPKSMASAAAAVPPTDEALPEGSDAQSAVT
DAVAAAAPLSQTAAASGAAAAAAAVSASATTPKHPEMAAVHFDEDPEDER
RRRRSRSRTRLNATVLKGDRAWRERAYGAPPPPLSQVTREITADLEVTLL
CVQRRLGDSGAAAAEAAEAAAAAAAAAKKAAAAAAAEARRKALVEQLERA
TESDATAATAQQRSASAAAAAAPPQRADAQLDAELAARGLWEQWIHAHHP
LVGGGARGPPGGALPPAIKAPFGTSPHTCCSGGSHCLAEAAAEAAAAAAA
AAAYRPMPYAPAEQGRAEARGEPWGGAAQASAPPAPPPSYLIEHAALSGD
AGVRCMDAALRARDDRRRAAAAAAEAAQRERERRRADEHARAVAELYGAR
PAAAALSGSSSSAAAQRGGEGAPPPPPASVSALEAARRRMGGGGKGAGGG
GDPVASGRVALPADPRLRLQELRRLRQHYAAAAAANS*