Trimin1|352961|estExt_Genemark1.C_Ctg_1380007 (polypeptide) Tribonema minus UTEX_B_3156

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
Namejgi.p|Trimin1|352961
Unique NameTrimin1|352961|estExt_Genemark1.C_Ctg_1380007
Typepolypeptide
OrganismTribonema minus UTEX_B_3156 (Tribonema minus UTEX_B_3156 )
Sequence length654
Homology
BLAST of jgi.p|Trimin1|352961 vs. uniprot
Match: A0A835Z9R8_9STRA (PIH1 domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z9R8_9STRA)

HSP 1 Score: 1066 bits (2758), Expect = 0.000e+0
Identity = 653/653 (100.00%), Postives = 653/653 (100.00%), Query Frame = 0
Query:    1 MARSMGIDIGQYGKQADGFWKMLDDLHASDPGAYDAYIKDTMEKAKAEEEARARPSFLPVPGYAIETTLRKXXXXXXXXXXXXXXXXXXXXXXXEAEHCSSLDACAAGTRVYVNVTSHVGIEPAQDVLRNALGDETPLRDSADGLQVPLLVSPLRPATSGGGGGVAVDVVVHPWVLRCCLASGTFLAMLTELALQWVEAERGGAAAASTLDHKGPDAAQLDRRWRVVEGRAYVHGGGGDGGEPLRFPLEGAAAQSRPPSQRSAAXXXXXXXXXXXXXXXXXXXXXRSIDTPAGLLAAMACDGSXXXXXXXXXXXXRSGEGSVLQSLGLQNVGSSGGKSAMEVRMPGQRARSEGDKGAKGRSGPIIEEVGAGAGKGGGAKRAGNGKPVVKKGFLTRTVKEELYPQGSSEGQPVGTYEKFMSRCKTKRATAAAAPPADDPEFNALLEAADPDLQQLFSSKDDDDSADPLFGHLQQLAGILGGLGGXXXXXXXXXXXXXXXXXVASGARTGSTGTERAPLREHNSGDGNTRASAXXXXXXXXXAPSAVLSTAGGGETAVAAEGHAIERLENRPAQLRLLSHSLREGPAGLVVSVALGEAAQRSSEAQLDISEQCLRLQMPGCAALEVPFPFAVNAAAAKAKFSAKRRELRVEAPRS 653
            MARSMGIDIGQYGKQADGFWKMLDDLHASDPGAYDAYIKDTMEKAKAEEEARARPSFLPVPGYAIETTLRKXXXXXXXXXXXXXXXXXXXXXXXEAEHCSSLDACAAGTRVYVNVTSHVGIEPAQDVLRNALGDETPLRDSADGLQVPLLVSPLRPATSGGGGGVAVDVVVHPWVLRCCLASGTFLAMLTELALQWVEAERGGAAAASTLDHKGPDAAQLDRRWRVVEGRAYVHGGGGDGGEPLRFPLEGAAAQSRPPSQRSAAXXXXXXXXXXXXXXXXXXXXXRSIDTPAGLLAAMACDGSXXXXXXXXXXXXRSGEGSVLQSLGLQNVGSSGGKSAMEVRMPGQRARSEGDKGAKGRSGPIIEEVGAGAGKGGGAKRAGNGKPVVKKGFLTRTVKEELYPQGSSEGQPVGTYEKFMSRCKTKRATAAAAPPADDPEFNALLEAADPDLQQLFSSKDDDDSADPLFGHLQQLAGILGGLGGXXXXXXXXXXXXXXXXXVASGARTGSTGTERAPLREHNSGDGNTRASAXXXXXXXXXAPSAVLSTAGGGETAVAAEGHAIERLENRPAQLRLLSHSLREGPAGLVVSVALGEAAQRSSEAQLDISEQCLRLQMPGCAALEVPFPFAVNAAAAKAKFSAKRRELRVEAPRS
Sbjct:    1 MARSMGIDIGQYGKQADGFWKMLDDLHASDPGAYDAYIKDTMEKAKAEEEARARPSFLPVPGYAIETTLRKXXXXXXXXXXXXXXXXXXXXXXXEAEHCSSLDACAAGTRVYVNVTSHVGIEPAQDVLRNALGDETPLRDSADGLQVPLLVSPLRPATSGGGGGVAVDVVVHPWVLRCCLASGTFLAMLTELALQWVEAERGGAAAASTLDHKGPDAAQLDRRWRVVEGRAYVHGGGGDGGEPLRFPLEGAAAQSRPPSQRSAAXXXXXXXXXXXXXXXXXXXXXRSIDTPAGLLAAMACDGSXXXXXXXXXXXXRSGEGSVLQSLGLQNVGSSGGKSAMEVRMPGQRARSEGDKGAKGRSGPIIEEVGAGAGKGGGAKRAGNGKPVVKKGFLTRTVKEELYPQGSSEGQPVGTYEKFMSRCKTKRATAAAAPPADDPEFNALLEAADPDLQQLFSSKDDDDSADPLFGHLQQLAGILGGLGGXXXXXXXXXXXXXXXXXVASGARTGSTGTERAPLREHNSGDGNTRASAXXXXXXXXXAPSAVLSTAGGGETAVAAEGHAIERLENRPAQLRLLSHSLREGPAGLVVSVALGEAAQRSSEAQLDISEQCLRLQMPGCAALEVPFPFAVNAAAAKAKFSAKRRELRVEAPRS 653          
BLAST of jgi.p|Trimin1|352961 vs. uniprot
Match: D7FKB5_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FKB5_ECTSI)

HSP 1 Score: 115 bits (287), Expect = 8.020e-23
Identity = 150/502 (29.88%), Postives = 208/502 (41.43%), Query Frame = 0
Query:    1 MARSMGIDIGQ-YGKQADGFWKMLDDLHASDPGAYDAYIKDTMEKAKAEEEARARPS---FLPVPGYAIETTLRKXXXXXXXXXXXXXXXXXXXXXXXEAEHCSSLDACAAGTRVYVNVTSHVGIEPAQDVLRNALGDETPLRDSADGLQVPLLVSPLRPATSGGGG-GVAVDVVVHPWVLRCCLASGTFLAMLTELALQWVEAERGGAAAASTLDHKGPDAAQLDRRWRVVEGRAYVHGGGGDGGEPLRFPLEGAAAQSRPPSQRSAAXXXXXXXXXXXXXXXXXXXXXRSIDTPAGLLAAMAC---DGSXXXXXXXXXXXXRS---------------GEGSVLQ-SLGL-------QNVGSSGGKSAMEVRMPGQRARSEGDKGAK---------GRSGPIIEEV-------GAGAGKGGGA-------KRAGNG----------------KPVVKKGFLTR--------TVKEELYPQGSSE-GQPVGTYEKFMSRCK 423
            +A+ MG   GQ +G QA   WKMLDDL  +D  AY        E AKA   A  +P    F P+PG+ ++ +L++                              ++  A GT+V++N+  H G+ P  D   + + D T    +A GL++P+ VS +R  T       +AVDVV HPWVLRC      F   +  LA  W+  E  G                + +R ++++   Y  G G  GG P+ FP   A++Q+ P  +R+       XXXXXXXXXXXXXX    +D P  LLAA+     DG             +                GEG  +  +LGL       +  G+    +  ++ +PG  A    D G +         GR GP+I E+        A AG GG A        RA +G                 PVVKKGFL+           +  LYP G SE G     Y K MSRCK
Sbjct:   42 LAKEMGF--GQDFGPQAANMWKMLDDLAVTDSAAY-------AEMAKAGAHALRKPKGKFFTPIPGFVVKASLQRPWAPLPSAVDGGVGGGTGKV----------VENAAVGTKVFINLCEHEGVSPPIDQTDSPV-DVTKEGRNASGLRIPMFVSRVRETTDHSDERALAVDVVFHPWVLRCSKGEPRFRDQVVALAAGWITKEHPGLV--------------VSQRRKLLKLCTYKGGDGAKGGTPVPFPAGDASSQADPLEERTRGSGGGPXXXXXXXXXXXXXXL---LDDPKSLLAAIRSSEPDGESGVGGNGDSKEGKQEVATASTVDGGPTGRGEGDGIPGALGLNAHGGYRKGGGNRNASATRDILLPGALAGLASDSGDRKRTENGLNEGRRGPLISEIVPDTSTTTARAGDGGEALRQVSDDSRAVDGCQGQEPGVERKVGKKSAPVVKKGFLSSFKVGGKAGLERAPLYPPGGSENGAEPSAYAKLMSRCK 506          
BLAST of jgi.p|Trimin1|352961 vs. uniprot
Match: A0A8K1FCK2_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1FCK2_PYTOL)

HSP 1 Score: 77.4 bits (189), Expect = 2.890e-11
Identity = 126/530 (23.77%), Postives = 196/530 (36.98%), Query Frame = 0
Query:    1 MARSMGIDIGQYGKQADGFWKMLDDLHASDPGAYDAYI----KDTMEKAKAEEEA---RARPSFL-PVPGYAIETTLRKXXXXXXXXXXXXXXXXXXXXXXXEAEHCSSLDACAAGTRVYVNVTSHVGIEPAQDVLRNALGDETPLRDS-----ADGLQVPLLVSPLRPATSGGGGGV-AVDVVVHPWVLRCCLASGTFLAMLTELALQWVEAERGGAAAASTLDHKGPDAAQLDRRWRVVEGRAYVHGGGGDGGEPL--RFPLEGAAAQSRPPSQRSAAXXXXXXXXXXXXXXXXXXXXXRSIDTPAGLLAAMACDGSXXXXXXXXXXXXRSGEGSVLQSLG--------LQNVGSSGGKSAMEVRMPGQRARSEGDKGAKGRSGPIIEEVGAGAGKGGGAKRAGNGKPVVKKGFLTRTVKEELYPQGSSEGQPVGTYEKFMSRCKT---------------------KRATAAAAPPAD------DPEFNALLEAADPDLQQLFSSKDDDDSADPLFG-HLQQLAGIL 478
            +A+ MG+D   +GK+A   WKMLD++  +DP AY  +I    KD    A +  E     A P +  P+PG  ++                                C+ +D      +++VN+ +H  +    D+ +N   D    RD+        LQ+PL++  LR      G    AVDVV HPWVL  C     F   + +LA++W++ +       + +    P    +  R++         GG   G E +  +F ++    Q++P S +                         + ++P  LL  ++   S             +GE    Q           +++V     K  +EV  P Q  + E  +  K  S                         VVKKGFL  + K  LYP+GS+EG+P   Y   +SR K                      K  T+A     D      D EF  L   ADPDL+    S+D   S + LFG H+ + A  L
Sbjct:   33 IAKQMGLDSKDFGKEAANLWKMLDEMAENDPKAYQEFIHEQIKDGPPMAASTNETGTPSASPRYFDPLPGCVVK--------------------------------CTMVDVQQQEQKLFVNLCAHEIV----DMPKNPNSDRDVPRDTRAVPHTSNLQIPLVIGSLRKIHDVSGAACHAVDVVFHPWVLERCEWDANFKREVLKLAIEWIQQD-------AKIKLTTPTGKFIKSRYK---------GGLNVGDEIITAKFLID-PETQAKPGSNQIGQRPLSTEKPVVAKL---------ATESPTDLLKEISLRDSDERIPKDEFIIALAGEKKAQQCDSKPQVCQDEVKHVPRPISKKLIEVIEPMQDNQKEHMQKKKPSS-------------------------VVKKGFLNSS-KTSLYPKGSNEGKPASAYVNLLSRSKVVDMNEMQQQRKKTVTDEFQFLKPQTSADRKSTDGEIDHGDHEFEQLCMDADPDLKPRHGSEDKT-STEQLFGDHIDEFAKFL 473          
BLAST of jgi.p|Trimin1|352961 vs. uniprot
Match: A0A6A4DK22_9STRA (PIH1 domain-containing protein n=3 Tax=Phytophthora TaxID=4783 RepID=A0A6A4DK22_9STRA)

HSP 1 Score: 72.0 bits (175), Expect = 1.650e-9
Identity = 55/217 (25.35%), Postives = 95/217 (43.78%), Query Frame = 0
Query:    1 MARSMGIDIGQYGKQADGFWKMLDDLHASDPGAYDAYIKDTMEKA-------------KAEEEARARPSFLPVPGYAIETTLRKXXXXXXXXXXXXXXXXXXXXXXXEAEHCSSLDACAAGTRVYVNVTSHVGIE-PAQDVLRNALGDETPLRDSADGLQVPLLVSPLRPATSGGGG-GVAVDVVVHPWVLRCCLASGTFLAMLTELALQWVEAERG 202
            +A+ MG+    +G++A   W+ L+DL  SDP  Y+++I + ++               +A  +A     F P PG+ ++ T+                          +  C   +     T++++N+ +H  I+ P        + ++T    +   LQVPL+V  LR  T   G     VDVVV+PWVLR       F   + +LA+QWV+ + G
Sbjct:   31 IAKQMGLQPKDFGEEAQALWQTLNDLSTSDPKRYESFINEQLQDGPPSTPTTDASSSNQATHDASPPRFFTPDPGFVVKCTM------------------------YHSVKCQQQE-----TKLFLNICAHKLIDAPKNPNSGQEVPEDTRAVPNTSNLQVPLVVGKLREITDFNGALCCVVDVVVNPWVLRRSEWDANFKREVMKLAVQWVQQDTG 218          
BLAST of jgi.p|Trimin1|352961 vs. uniprot
Match: A0A662XWB4_9STRA (PIH1 domain-containing protein n=2 Tax=Nothophytophthora sp. Chile5 TaxID=2483409 RepID=A0A662XWB4_9STRA)

HSP 1 Score: 63.5 bits (153), Expect = 7.530e-7
Identity = 51/219 (23.29%), Postives = 85/219 (38.81%), Query Frame = 0
Query:    1 MARSMGIDIGQYGKQADGFWKMLDDLHASDPGAYDAYIKDTMEKAKAEEEARARPS---------------FLPVPGYAIETTLRKXXXXXXXXXXXXXXXXXXXXXXXEAEHCSSLDACAAGTRVYVNVTSHVGIE-PAQDVLRNALGDETPLRDSADGLQVPLLVSPLRP-ATSGGGGGVAVDVVVHPWVLRCCLASGTFLAMLTELALQWVEAERG 202
            +A+ MG+    +G +A   W  L+DL + DP  Y+A+I D ++                            F P PG+ ++  +                               S+      T++++N+  H  +  P        + ++T    +   LQ+PL+V  LR  A   G    AVDVV+HPWVLR       F   + +LA+ WV+ + G
Sbjct:   34 IAKQMGLQPSDFGDEAQALWSTLNDLSSKDPKRYEAFINDQLQDGPPXXXXXXXXXXXXXXXXXTSTPPRFFTPEPGFVVKCAMYH-----------------------------SIKCQQRETKLFLNLCGHKLVAAPTNPNNGQEVPEDTRAVPNTSNLQIPLVVGKLRELADLNGAVCCAVDVVLHPWVLRRAEWDSAFKREVLKLAVHWVQQDAG 223          
The following BLAST results are available for this feature:
BLAST of jgi.p|Trimin1|352961 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 5
Match NameE-valueIdentityDescription
A0A835Z9R8_9STRA0.000e+0100.00PIH1 domain-containing protein n=1 Tax=Tribonema m... [more]
D7FKB5_ECTSI8.020e-2329.88Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A8K1FCK2_PYTOL2.890e-1123.77Uncharacterized protein n=1 Tax=Pythium oligandrum... [more]
A0A6A4DK22_9STRA1.650e-925.35PIH1 domain-containing protein n=3 Tax=Phytophthor... [more]
A0A662XWB4_9STRA7.530e-723.29PIH1 domain-containing protein n=2 Tax=Nothophytop... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 66..89
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 238..270
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 68..95
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 502..536
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 426..468
NoneNo IPR availablePANTHERPTHR22997UNCHARACTERIZEDcoord: 33..200
coord: 583..649
IPR012981PIH1, N-terminalPFAMPF08190PIH1coord: 73..200
e-value: 1.1E-7
score: 31.5

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Contig_138contigContig_138:63618..68505 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Tribonema minus UTEX_B_31562021-06-17
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
jgi.p|Trimin1|352961mRNA_13960Tribonema minus UTEX_B_3156 mRNAContig_138 63604..68505 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Trimin1|352961|estExt_Genemark1.C_Ctg_1380007 ID=Trimin1|352961|estExt_Genemark1.C_Ctg_1380007|Name=jgi.p|Trimin1|352961|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=654bp
MARSMGIDIGQYGKQADGFWKMLDDLHASDPGAYDAYIKDTMEKAKAEEE
ARARPSFLPVPGYAIETTLRKKRQRAQQQQQQQQRQQRRQGGEEEAEHCS
SLDACAAGTRVYVNVTSHVGIEPAQDVLRNALGDETPLRDSADGLQVPLL
VSPLRPATSGGGGGVAVDVVVHPWVLRCCLASGTFLAMLTELALQWVEAE
RGGAAAASTLDHKGPDAAQLDRRWRVVEGRAYVHGGGGDGGEPLRFPLEG
AAAQSRPPSQRSAAAAAAAADADLKGSSSGSGGGGRSIDTPAGLLAAMAC
DGSGGGSAPAAAAAARSGEGSVLQSLGLQNVGSSGGKSAMEVRMPGQRAR
SEGDKGAKGRSGPIIEEVGAGAGKGGGAKRAGNGKPVVKKGFLTRTVKEE
LYPQGSSEGQPVGTYEKFMSRCKTKRATAAAAPPADDPEFNALLEAADPD
LQQLFSSKDDDDSADPLFGHLQQLAGILGGLGGGQEASSTAANTKKAAAA
VASGARTGSTGTERAPLREHNSGDGNTRASAAAAGGATNAAPSAVLSTAG
GGETAVAAEGHAIERLENRPAQLRLLSHSLREGPAGLVVSVALGEAAQRS
SEAQLDISEQCLRLQMPGCAALEVPFPFAVNAAAAKAKFSAKRRELRVEA
PRS*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR012981PIH1_N