Trimin1|352880|estExt_Genemark1.C_Ctg_1350012 (polypeptide) Tribonema minus UTEX_B_3156

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
Namejgi.p|Trimin1|352880
Unique NameTrimin1|352880|estExt_Genemark1.C_Ctg_1350012
Typepolypeptide
OrganismTribonema minus UTEX_B_3156 (Tribonema minus UTEX_B_3156 )
Sequence length404
Homology
BLAST of jgi.p|Trimin1|352880 vs. uniprot
Match: A0A835ZD48_9STRA (Rad51-like protein c n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZD48_9STRA)

HSP 1 Score: 707 bits (1824), Expect = 1.330e-255
Identity = 403/403 (100.00%), Postives = 403/403 (100.00%), Query Frame = 0
Query:    1 MAPAANQHSFASRRQLGTLGIAPSLLEKLNRAGFKLVGDVLDSRPDELSTEAGMTPQEALECMQLVSAACGDAGGQXXXXXXXXXXXXXTSASDLLAQERATRGIVCFSRKIDDMFGGGVPRGELTEIMGTPGIGKTQFGMQLAVDVQIPVLFGGVGGEAVYIDTEGSFTPERVAQMADALVSHLARVSAAHRKKQTPAQAEQWAAAAALVTREYLLRRIHVFRVHDHAEQLAAVRALPAFVASRSGXXXXXXXXXXXXXXXVVLDSVAFHFRHACADMALRARMLATMGQQLNQLAREQSLAVVLTNQMTKRYDSGRNGEEKLVAALGDTWAHAATNRLMLFWKENQRFASLLKSSRREPATVPFIVDRVGIRDVPTPKVRPPSSDSAQQSSADDAKRIRLS 403
            MAPAANQHSFASRRQLGTLGIAPSLLEKLNRAGFKLVGDVLDSRPDELSTEAGMTPQEALECMQLVSAACGDAGGQXXXXXXXXXXXXXTSASDLLAQERATRGIVCFSRKIDDMFGGGVPRGELTEIMGTPGIGKTQFGMQLAVDVQIPVLFGGVGGEAVYIDTEGSFTPERVAQMADALVSHLARVSAAHRKKQTPAQAEQWAAAAALVTREYLLRRIHVFRVHDHAEQLAAVRALPAFVASRSGXXXXXXXXXXXXXXXVVLDSVAFHFRHACADMALRARMLATMGQQLNQLAREQSLAVVLTNQMTKRYDSGRNGEEKLVAALGDTWAHAATNRLMLFWKENQRFASLLKSSRREPATVPFIVDRVGIRDVPTPKVRPPSSDSAQQSSADDAKRIRLS
Sbjct:    1 MAPAANQHSFASRRQLGTLGIAPSLLEKLNRAGFKLVGDVLDSRPDELSTEAGMTPQEALECMQLVSAACGDAGGQXXXXXXXXXXXXXTSASDLLAQERATRGIVCFSRKIDDMFGGGVPRGELTEIMGTPGIGKTQFGMQLAVDVQIPVLFGGVGGEAVYIDTEGSFTPERVAQMADALVSHLARVSAAHRKKQTPAQAEQWAAAAALVTREYLLRRIHVFRVHDHAEQLAAVRALPAFVASRSGXXXXXXXXXXXXXXXVVLDSVAFHFRHACADMALRARMLATMGQQLNQLAREQSLAVVLTNQMTKRYDSGRNGEEKLVAALGDTWAHAATNRLMLFWKENQRFASLLKSSRREPATVPFIVDRVGIRDVPTPKVRPPSSDSAQQSSADDAKRIRLS 403          
BLAST of jgi.p|Trimin1|352880 vs. uniprot
Match: D7G8V6_ECTSI (Rad51 homolog C n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G8V6_ECTSI)

HSP 1 Score: 289 bits (739), Expect = 8.860e-92
Identity = 160/285 (56.14%), Postives = 197/285 (69.12%), Query Frame = 0
Query:   91 SASDLLAQERATRGIVCFSRKIDDMFGGGVPRGELTEIMGTPGIGKTQFGMQLAVDVQIPVLFGGVGGEAVYIDTEGSFTPERVAQMADALVSHLARVSAAHRKKQTPAQAEQWAAAAALVTREYLLRRIHVFRVHDHAEQLAAVRALPAFVASRSGXXXXXXXXXXXXXXXVVLDSVAFHFRHACADMALRARMLATMGQQLNQLAREQSLAVVLTNQMTKRYDSGRNGEEKLVAALGDTWAHAATNRLMLFWKENQRFASLLKSSRREPATVPFIVDRVGIRD 375
            SA +L+ + R  + I+ F R+ID M GGGVPRGELTE+ GTPG+GKTQFGMQLAVDVQIP  FGGVGG A+YIDTEGS T ER++Q+  A+V HL +++   RK+  P         +A+ T+E  L  IHV+R+HDHAEQLAAVR LP F+ +                  VV+DSVAFHFRHA  DM++R RML+ M QQLN++A+  SLAVVL NQMT +  +G  GE  LV ALG++WAHAATNRL+L WK  +RFA LLKS R    TVPF V  VGIRD
Sbjct:   25 SARELIVRGRHKKPIITFCREIDGMMGGGVPRGELTEVCGTPGVGKTQFGMQLAVDVQIPHQFGGVGGGALYIDTEGSLTVERLSQLCSAVVEHLQKIARNKRKQGVPDLE------SAVPTQEAFLGGIHVWRLHDHAEQLAAVRTLPEFLVAHP------------EVKLVVMDSVAFHFRHAFQDMSVRTRMLSRMAQQLNEVAQAHSLAVVLVNQMTTKVMTGHRGESSLVPALGESWAHAATNRLLLLWKGQERFAELLKSPRLRRKTVPFSVVGVGIRD 291          
BLAST of jgi.p|Trimin1|352880 vs. uniprot
Match: A0A7S1SLP5_9CHLO (Hypothetical protein n=2 Tax=Tetraselmis chuii TaxID=63592 RepID=A0A7S1SLP5_9CHLO)

HSP 1 Score: 275 bits (702), Expect = 9.930e-86
Identity = 169/376 (44.95%), Postives = 220/376 (58.51%), Query Frame = 0
Query:   14 RQLGTLGIAPSLLEKLNRAGFKLVGDVLDSRPDELSTEAGMTPQEALECMQLV-SAACGDAGGQXXXXXXXXXXXXXTSASDLLAQERATRGIVCFSRKIDDMFGGGVPRGELTEIMGTPGIGKTQFGMQLAVDVQIPVLFGGVGGEAVYIDTEGSFTPERVAQMADALVSHLARVSAAHRKKQTPAQAEQWAAAAALVTREYLLRRIHVFRVHDHAEQLAAVRALPAFVASRSGXXXXXXXXXXXXXXXVVLDSVAFHFRHACADMALRARMLATMGQQLNQLAREQSLAVVLTNQMTKRYDSGRNGE--EKLVAALGDTWAHAATNRLMLFWKENQRFASLLKSSRREPATVPFIVDRVGIRDV-PTPKVRPPS 385
            R + TL +AP++  KL   GF+ VGD+    P +L+ EAG+T QEAL  +++  SA  GD G                SA  + A+E+A+RGIV F  K+D M GGG+P   +TE  G PG+GKTQ GMQ+AVD QIP   GG+ GEAVYIDTEGSF  ER+  + DA+V H+  +      ++   QAE++       +RE +L  IH FRVHD AEQ+A    LP F+ +                  +++DS+ F FR    DMA R R+LA M QQL QLA  + +AVVL NQ+T +    R G    +LV ALGD+WAHAAT+R++LFW E QRFA L KS  R   TVP+ V   GIRDV P P   PPS
Sbjct:    6 RLIATLELAPTVRHKLQATGFRNVGDLRGCGPIDLAREAGITHQEALFVLKVAFSADHGDEG-----------IAGAISAEQVYAEEQASRGIVTFCEKVDRMLGGGIPARAITEFCGVPGVGKTQLGMQIAVDAQIPECMGGLQGEAVYIDTEGSFMMERLLDITDAVVDHVHNLGRRATSEECKTQAERF-------SRESVLHGIHYFRVHDAAEQIAVTNTLPQFMDNHP------------KVCAIIVDSITFQFRQGFQDMAQRTRLLAQMAQQLMQLAESKGIAVVLINQVTTKVRQERTGGGGSRLVPALGDSWAHAATSRVILFWHEGQRFAHLHKSPSRPSTTVPYAVTAAGIRDVAPAP---PPS 348          
BLAST of jgi.p|Trimin1|352880 vs. uniprot
Match: A0A6P7WT84_9AMPH (DNA repair protein RAD51 homolog 3-like n=2 Tax=Microcaecilia unicolor TaxID=1415580 RepID=A0A6P7WT84_9AMPH)

HSP 1 Score: 264 bits (674), Expect = 1.060e-81
Identity = 162/390 (41.54%), Postives = 227/390 (58.21%), Query Frame = 0
Query:   13 RRQLGTLGIAPSLLEKLNRAGFKLVGDVLDSRPDELSTEAGMTPQEALECMQLVSAACGDAGGQXXXXXXXXXXXXXTSASDLLAQERATRGIVCFSRKIDDMFGGGVPRGELTEIMGTPGIGKTQFGMQLAVDVQIPVLFGGVGGEAVYIDTEGSFTPERVAQMADALVSHLARVSAAHRKKQTPAQAEQWAAAAALVTREYLLRRIHVFRVHDHAEQLAAVRALPAFVASRSGXXXXXXXXXXXXXXXVVLDSVAFHFRHACADMALRARMLATMGQQLNQLAREQSLAVVLTNQMTKRYDSGRNGEEKLVAALGDTWAHAATNRLMLFWKENQRFASLLKSSRREPATVPFIVDRVGIRDVPTPKVRPPSSDSAQQSSADDAKRIRL 402
            +R +G+  +AP++  KL  AGF    DV++ +P ELS EAG++ +EALE +Q+V      + G+              +A +LL +E+A   I+ F   +DDM GGGVP  ++TE+ G PG+GKTQ  +QLAVDVQIP  FGG+ GEA+YIDTEGSF  +RV  +A+A V H   +S +H       Q +++    A  + + +L RI+ FR HD+ E LA V  LP F                     V++DS+AF FRH   D++LR R+L  + QQL  LA +  LAV+LTNQMT R    ++    LV ALG++W HAAT RL+L W+  QRFA+L KS  ++ +TVPF +  +G RDVP P     SS    QS  +  KR R+
Sbjct:    2 QRDVGSFPLAPTVKTKLISAGFLTAHDVVEMKPLELSKEAGISKEEALETLQIVRRK---SLGEKTCFSEASSIIRKYTALELLEKEQAQGAIITFCSVLDDMLGGGVPLTKITEVCGAPGVGKTQLCIQLAVDVQIPECFGGIAGEAIYIDTEGSFMVDRVVNIAEACVQHCKLISESH-------QQDEYEEGMANFSLDSILSRIYYFRCHDYVELLAQVHLLPDFFFQHP------------KVRLVIIDSIAFPFRHDFDDLSLRTRLLNGLAQQLISLANDHKLAVILTNQMTTRIGQSQS---MLVPALGESWGHAATIRLILHWQCQQRFATLYKSPSQKESTVPFHISPLGFRDVPVPSPHLSSS----QSQTNPRKRPRV 362          
BLAST of jgi.p|Trimin1|352880 vs. uniprot
Match: A0A6P8PBN3_GEOSA (DNA repair protein RAD51 homolog 3 n=2 Tax=Gymnophiona TaxID=8445 RepID=A0A6P8PBN3_GEOSA)

HSP 1 Score: 262 bits (669), Expect = 5.970e-81
Identity = 157/365 (43.01%), Postives = 218/365 (59.73%), Query Frame = 0
Query:   13 RRQLGTLGIAPSLLEKLNRAGFKLVGDVLDSRPDELSTEAGMTPQEALECMQLVSAACGDAGGQXXXXXXXXXXXXXTSASDLLAQERATRGIVCFSRKIDDMFGGGVPRGELTEIMGTPGIGKTQFGMQLAVDVQIPVLFGGVGGEAVYIDTEGSFTPERVAQMADALVSHLARVSAAHRKKQTPAQAEQWAAAAALVTREYLLRRIHVFRVHDHAEQLAAVRALPAFVASRSGXXXXXXXXXXXXXXXVVLDSVAFHFRHACADMALRARMLATMGQQLNQLAREQSLAVVLTNQMTKRYDSGRNGEEKLVAALGDTWAHAATNRLMLFWKENQRFASLLKSSRREPATVPFIVDRVGIRDVP 377
            +R +G+  +AP++  KL  AGF    D+   +P ELS EAG++ +EALE +Q+V     ++ G               +A +LL QE+A   I+ F   +DDM GGGVP  ++TE+ G PG+GKTQ  +QLAVDVQIPV FGG+ GE VYIDTEGSF  +RV  +A+A V H   +S +H       Q +++    A  + + +L RI+ FR HD+ E LA V  LP FV                    +++DS+AF FRH   D++LR R+L  + QQL  LA +  LAV+LTNQMT R   G+N +  LV ALG++W HAAT RL+L W+  QRFA+L KS  ++ +TVPF +  +G RDVP
Sbjct:    2 QRDVGSYPLAPTVKVKLIGAGFLTAQDIAGMKPLELSREAGISKEEALETLQIVRH---ESLGAKTCFSEAAYVIRKCTALELLEQEQAQGAIITFCSVLDDMLGGGVPLTKITEVCGAPGVGKTQLCIQLAVDVQIPVCFGGIAGEVVYIDTEGSFMIDRVVDIAEACVQHCKLISESH-------QQDEYKEGIANFSLDSILSRIYYFRCHDYVELLAQVHLLPDFVFQHQ------------EVRLIIIDSIAFPFRHDFDDLSLRTRLLNGLAQQLISLANDHKLAVILTNQMTTRI--GQN-QSMLVPALGESWGHAATIRLILHWQCQQRFATLYKSPSQKESTVPFHISALGFRDVP 341          
BLAST of jgi.p|Trimin1|352880 vs. uniprot
Match: A0A6P4XU31_BRABE (DNA repair protein RAD51 homolog 3-like n=3 Tax=Branchiostoma TaxID=7737 RepID=A0A6P4XU31_BRABE)

HSP 1 Score: 256 bits (654), Expect = 1.260e-78
Identity = 159/393 (40.46%), Postives = 221/393 (56.23%), Query Frame = 0
Query:   14 RQLGTLGIAPSLLEKLNRAGFKLVGDVLDSRPDELSTEAGMTPQEALECMQLVSAACGDAGGQXXXXXXXXXXXXXTSASDLLAQERATRGIVCFSRKIDDMFGGGVPRGELTEIMGTPGIGKTQFGMQLAVDVQIPVLFGGVGGEAVYIDTEGSFTPERVAQMADALVSHLARVSAA-HRKKQTPAQAEQWAAAAALVTREYLLRRIHVFRVHDHAEQLAAVRALPAFVASRSGXXXXXXXXXXXXXXXVVLDSVAFHFRHACADMALRARMLATMGQQLNQLAREQSLAVVLTNQMTKRYDSGRNGEEKLVAALGDTWAHAATNRLMLFWKENQRFASLLKSSRREPATVPFIVDRVGIRDVPTPK-VRPPSSDSAQQ---SSADDAKRIR 401
            R +G+  + P L  KL   GF  V D+ D +P ELS E  ++P+EALE +++V     DA                 +A DLL +ER    I+ F   +D++ GGGVP  ++TE  G PG+GKTQ GMQLA+DVQIP +FGG+GGEAVY+DTEGSF   R+  MA A V H   ++   + ++Q  A ++         T E++L RIH +RVHD  E +A +  LP F+                    VV+DS+AF FRH   D++LR R+L  + Q   +LA     AVVL NQMT +     +G+  LV ALG++W HA+T R++LFW+   R+A L KS  RE ATVP+ V   GIRDV  P   +  +SD +Q+   S  D ++R R
Sbjct:    3 RHVGSYPLPPYLKTKLLAGGFSTVEDLEDLKPVELSKELKISPEEALEILRVVQGVQNDASSPSSSDEAVK------TALDLLQEERHQGCIITFCSALDELLGGGVPLTKITEFCGAPGVGKTQMGMQLAIDVQIPCVFGGLGGEAVYVDTEGSFMVHRLEDMAKAAVEHCRHIATVENNREQLEAMSD--------FTVEHILSRIHFYRVHDWVELVALINILPEFLQQHP------------KIRLVVMDSIAFPFRHDFEDLSLRTRLLNGLAQNCIRLADSHKAAVVLVNQMTTKMGHSGDGQAHLVPALGESWGHASTIRVLLFWEAGYRYARLYKSPTREEATVPYQVTMAGIRDVCIPNSTQDVTSDMSQEEGTSHGDHSQRKR 369          
BLAST of jgi.p|Trimin1|352880 vs. uniprot
Match: A0A1S3HA83_LINUN (DNA repair protein RAD51 homolog 3-like n=2 Tax=Lingula unguis TaxID=7574 RepID=A0A1S3HA83_LINUN)

HSP 1 Score: 256 bits (654), Expect = 1.340e-78
Identity = 154/390 (39.49%), Postives = 217/390 (55.64%), Query Frame = 0
Query:   14 RQLGTLGIAPSLLEKLNRAGFKLVGDVLDSRPDELSTEAGMTPQEALECMQLVSAACGDAGGQXXXXXXXXXXXXXTSASDLLAQERATRGIVCFSRKIDDMFGGGVPRGELTEIMGTPGIGKTQFGMQLAVDVQIPVLFGGVGGEAVYIDTEGSFTPERVAQMADALVSHLARVSAAHRKKQTPAQAEQWAAAAALVTREYLLRRIHVFRVHDHAEQLAAVRALPAFVASRSGXXXXXXXXXXXXXXXVVLDSVAFHFRHACADMALRARMLATMGQQLNQLAREQSLAVVLTNQMTKRYDSGRNGEEKLVAALGDTWAHAATNRLMLFWKENQRFASLLKSSRREPATVPFIVDRVGIRDVP-TPKVRPPSSDSAQQSSADDAKRIRL 402
            R+L +  + P    KL  AGF  VGD+ D RP ELS E  ++ + AL+ +Q +        G               +A D+L  E   + I+ FS ++DDM GGGVP  + TE  G PGIGKTQ   QL+VDVQIP  FGG+GGEAVYIDTEGSF  +R+  +A A V H   ++AA    +     + ++        E +L+ IH +R H++ E +A V  LP F+   S                +++DS+AFHFRH   D+ALR R+L  M Q   +LA E +LAVVLTNQMT R+   + G+  L+ ALG++W HA+T R++L+W+ +QR+A L KS  R+  T+P+ V   GIRDV  T  V  P+    Q  S    K+ ++
Sbjct:    6 RELSSFPLPPIYRSKLVAAGFITVGDIKDVRPVELSKELSISKEAALDILQTIENHSSTKPGNGHSSSCSQAR----TALDMLRDESLQQYIITFSERLDDMLGGGVPLTKTTEFCGAPGIGKTQMSFQLSVDVQIPECFGGLGGEAVYIDTEGSFIVDRLIDVAKATVEHCQHIAAAENSAEQVEALKNFSV-------ESILKGIHYYRCHNYVELIATVHLLPEFLKEHS------------QVKLIIVDSIAFHFRHDFDDLALRTRLLNGMSQSFIRLANEHTLAVVLTNQMTTRFSVDQQGQSYLIPALGESWGHASTVRVVLYWENSQRWAKLYKSPYRKEDTIPYQVTTGGIRDVQITDPVTVPTHTPLQDESQPCGKKRKI 372          
BLAST of jgi.p|Trimin1|352880 vs. uniprot
Match: A0A2B4SRJ4_STYPI (DNA repair protein RAD51-like 3 n=1 Tax=Stylophora pistillata TaxID=50429 RepID=A0A2B4SRJ4_STYPI)

HSP 1 Score: 257 bits (656), Expect = 1.530e-78
Identity = 155/368 (42.12%), Postives = 212/368 (57.61%), Query Frame = 0
Query:   13 RRQLGTLGIAPSLLEKLNRAGFKLVGDVLDSRPDELSTEAGMTPQEALECMQLV-----SAACGDAGGQXXXXXXXXXXXXXTSASDLLAQERATRGIVCFSRKIDDMFGGGVPRGELTEIMGTPGIGKTQFGMQLAVDVQIPVLFGGVGGEAVYIDTEGSFTPERVAQMADALVSHLARVSAAHRKKQTPAQAEQWAAAAALVTREYLLRRIHVFRVHDHAEQLAAVRALPAFVASRSGXXXXXXXXXXXXXXXVVLDSVAFHFRHACADMALRARMLATMGQQLNQLAREQSLAVVLTNQMTKRYDSGRNGEEKLVAALGDTWAHAATNRLMLFWKENQRFASLLKSSRREPATVPFIVDRVGIRD 375
            +R+L T  +AP+ + KL+ AG+  V D+ D  P ELS + G+  +E+L+ +Q V     S+   +                 T+A DLL QE++   IV F  K DDM GGGV  G++TE  G PGIGKTQ GMQLAVDVQIP  FGG+ G+A+YIDTEGSF  ERV  +A A VSH+  +  +    QT       A     V  E +L RI+VFR HD+ + +A    LP F+   S                +V+DS+AFHFRH   D+ALR R+L  + Q   ++A E+ LAVV  NQMT R  + + G   L+ ALG++W HA+T R++L+W+ NQRFA+L KS  R+   VPF +   G+RD
Sbjct:    2 QRELCTFPLAPNYVHKLSSAGYVTVDDLKDVTPTELSEDLGIDKEESLKIIQTVRSIKDSSQLCNKKSTTSRKNSSSSIPGSTNAFDLLQQEQSAGSIVTFCEKFDDMLGGGVQVGKITEFCGAPGIGKTQIGMQLAVDVQIPDEFGGLDGDAIYIDTEGSFIVERVVDIATAAVSHMTNIVQSSDADQTERDLLNGALKKFHV--ESILSRIYVFRCHDYVQLIALSHVLPDFLLEHS------------KVKLIVVDSIAFHFRHDFDDLALRTRLLNGLAQSFIKMACERQLAVVFMNQMTTRVKTTQLGRSHLIPALGESWGHASTIRVVLYWEVNQRFANLYKSPSRQEMIVPFQITADGVRD 355          
BLAST of jgi.p|Trimin1|352880 vs. uniprot
Match: A0A151N5Y8_ALLMI (DNA repair RAD51-like protein 3 n=12 Tax=Crocodylia TaxID=1294634 RepID=A0A151N5Y8_ALLMI)

HSP 1 Score: 255 bits (652), Expect = 2.110e-78
Identity = 161/390 (41.28%), Postives = 220/390 (56.41%), Query Frame = 0
Query:   13 RRQLGTLGIAPSLLEKLNRAGFKLVGDVLDSRPDELSTEAGMTPQEALECMQLVSAACGDAGGQXXXXXXXXXXXXXTSASDLLAQERATRGIVCFSRKIDDMFGGGVPRGELTEIMGTPGIGKTQFGMQLAVDVQIPVLFGGVGGEAVYIDTEGSFTPERVAQMADALVSHLARVSAAHRKKQTPAQAEQWAAAAALVTREYLLRRIHVFRVHDHAEQLAAVRALPAFVASRSGXXXXXXXXXXXXXXXVVLDSVAFHFRHACADMALRARMLATMGQQLNQLAREQSLAVVLTNQMTKRYDSGRNGEEKLVAALGDTWAHAATNRLMLFWKENQRFASLLKSSRREPATVPFIVDRVGIRDVPTPKVRPPSSDSAQQSSADDAKRIRL 402
            +R LG+L +AP+L  +L  AGF    ++L+  P ELS E G++ +EALE +Q++   C     +              +A +LL QE+A   +V F   +DD+ GGGV   ++TEI G PG+GKTQ  MQLAVDVQIP  FGG+ GEAVYIDTEGSF  ERVA +A A V H   ++ AH       Q E    A    + E +L  I+ FR HD+ E LA +  LP F++  S                V +D +AF FRH   D++LR R+L  + QQL  +A +  LAV+LTNQMT R    ++    LV ALG++W HAAT RL+L W  NQR A+L KS  ++ +TVP+ +   G RDV  P    P S + + S  +  KR R+
Sbjct:    2 QRDLGSLPLAPALRARLVGAGFSTAQELLEVGPCELSKEIGISNEEALETLQVIRQECDSDAARMGGDPTSLRTC---TALELLEQEQAQGFVVTFCSVLDDILGGGVQLTKITEICGAPGVGKTQLCMQLAVDVQIPECFGGLAGEAVYIDTEGSFMVERVADIATACVQHCQLIAEAH-------QEEDHHKALETFSLESILSHIYYFRCHDYTELLAQIYLLPDFLSEHS------------KVRLVAVDGIAFPFRHDFEDLSLRTRLLNGLAQQLISIANDHKLAVILTNQMTTRIGQSQS---TLVPALGESWGHAATIRLILHWDNNQRLATLYKSPSQKESTVPYCITPHGFRDVQPP----PPSQTPEGSEMNPRKRPRI 362          
BLAST of jgi.p|Trimin1|352880 vs. uniprot
Match: UPI0016036942 (DNA repair protein RAD51 homolog 3-like isoform X1 n=2 Tax=Branchiostoma floridae TaxID=7739 RepID=UPI0016036942)

HSP 1 Score: 255 bits (652), Expect = 2.300e-78
Identity = 154/367 (41.96%), Postives = 205/367 (55.86%), Query Frame = 0
Query:   14 RQLGTLGIAPSLLEKLNRAGFKLVGDVLDSRPDELSTEAGMTPQEALECMQLVSAACGDAGGQXXXXXXXXXXXXXTSASDLLAQERATRGIVCFSRKIDDMFGGGVPRGELTEIMGTPGIGKTQFGMQLAVDVQIPVLFGGVGGEAVYIDTEGSFTPERVAQMADALVSHLARVSAAHRKK-QTPAQAEQWAAAAALVTREYLLRRIHVFRVHDHAEQLAAVRALPAFVASRSGXXXXXXXXXXXXXXXVVLDSVAFHFRHACADMALRARMLATMGQQLNQLAREQSLAVVLTNQMTKRYDSGRNGEEKLVAALGDTWAHAATNRLMLFWKENQRFASLLKSSRREPATVPFIVDRVGIRDVPTP 379
            R +G+  I P L  KL  AGF    D+ D +P ELS E  +TP EALE +++V         Q              +A D+L +ER   GI+ F   +D++ GGGVP  ++TE  G PG+GKTQ GMQLA+DVQIP  FGG+GGEAVYIDTEGSF   R+  MA A + H   ++     + Q  A A+         T E++L RIH +RVHD  E +A +  LP F+   S                VV+DS+AF FRH   D++LR R+L  + Q   +LA     AVVL NQMT +     +G+  LV ALG++W HA+T R++LFW+   R+A L KS  RE ATVP+ V   G+RDV  P
Sbjct:    3 RHIGSYPIPPYLKNKLITAGFSTAEDLEDVKPVELSKELKITPAEALEVLRVV---------QGDQKDPPSPDEGVKTALDMLQEEREQGGIITFCSALDELLGGGVPLTKITEFCGAPGVGKTQMGMQLAIDVQIPSAFGGLGGEAVYIDTEGSFMVHRLEDMAKAAMEHCRHIATVENNRDQLEAMAD--------FTVEHILSRIHFYRVHDWVELVALINILPEFLQEHS------------KVRLVVIDSIAFPFRHDFEDLSLRTRLLNGLAQNCIRLADSHKAAVVLVNQMTTKMGHAGDGQAHLVPALGESWGHASTIRVLLFWEAGCRYARLYKSPTREEATVPYQVTVAGVRDVCVP 340          
The following BLAST results are available for this feature:
BLAST of jgi.p|Trimin1|352880 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A835ZD48_9STRA1.330e-255100.00Rad51-like protein c n=1 Tax=Tribonema minus TaxID... [more]
D7G8V6_ECTSI8.860e-9256.14Rad51 homolog C n=1 Tax=Ectocarpus siliculosus Tax... [more]
A0A7S1SLP5_9CHLO9.930e-8644.95Hypothetical protein n=2 Tax=Tetraselmis chuii Tax... [more]
A0A6P7WT84_9AMPH1.060e-8141.54DNA repair protein RAD51 homolog 3-like n=2 Tax=Mi... [more]
A0A6P8PBN3_GEOSA5.970e-8143.01DNA repair protein RAD51 homolog 3 n=2 Tax=Gymnoph... [more]
A0A6P4XU31_BRABE1.260e-7840.46DNA repair protein RAD51 homolog 3-like n=3 Tax=Br... [more]
A0A1S3HA83_LINUN1.340e-7839.49DNA repair protein RAD51 homolog 3-like n=2 Tax=Li... [more]
A0A2B4SRJ4_STYPI1.530e-7842.12DNA repair protein RAD51-like 3 n=1 Tax=Stylophora... [more]
A0A151N5Y8_ALLMI2.110e-7841.28DNA repair RAD51-like protein 3 n=12 Tax=Crocodyli... [more]
UPI00160369422.300e-7841.96DNA repair protein RAD51 homolog 3-like isoform X1... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR016467DNA recombination and repair protein, RecA-likePIRSFPIRSF005856Rad51coord: 4..379
e-value: 2.3E-66
score: 221.9
IPR027417P-loop containing nucleoside triphosphate hydrolaseGENE3D3.40.50.300coord: 87..377
e-value: 1.1E-66
score: 226.9
IPR027417P-loop containing nucleoside triphosphate hydrolaseSUPERFAMILY52540P-loop containing nucleoside triphosphate hydrolasescoord: 107..376
IPR013632DNA recombination and repair protein Rad51-like, C-terminalPFAMPF08423Rad51coord: 88..180
e-value: 1.1E-22
score: 80.5
coord: 261..375
e-value: 1.3E-12
score: 47.5
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 375..403
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 383..397
NoneNo IPR availablePANTHERPTHR46239DNA REPAIR PROTEIN RAD51 HOMOLOG 3 RAD51Ccoord: 15..386
IPR020588DNA recombination and repair protein RecA-like, ATP-binding domainPROSITEPS50162RECA_2coord: 101..310
score: 38.68169
IPR033925Rad51/DMC1/RadACDDcd01123Rad51_DMC1_radAcoord: 109..374
e-value: 2.44739E-67
score: 211.673

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Contig_135contigContig_135:151101..155044 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Tribonema minus UTEX_B_31562021-06-17
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
jgi.p|Trimin1|352880mRNA_14952Tribonema minus UTEX_B_3156 mRNAContig_135 151095..155156 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Trimin1|352880|estExt_Genemark1.C_Ctg_1350012 ID=Trimin1|352880|estExt_Genemark1.C_Ctg_1350012|Name=jgi.p|Trimin1|352880|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=404bp
MAPAANQHSFASRRQLGTLGIAPSLLEKLNRAGFKLVGDVLDSRPDELST
EAGMTPQEALECMQLVSAACGDAGGQQAGGGGNVPPSGGTSASDLLAQER
ATRGIVCFSRKIDDMFGGGVPRGELTEIMGTPGIGKTQFGMQLAVDVQIP
VLFGGVGGEAVYIDTEGSFTPERVAQMADALVSHLARVSAAHRKKQTPAQ
AEQWAAAAALVTREYLLRRIHVFRVHDHAEQLAAVRALPAFVASRSGGGG
GGGGAGGGGVLLVVLDSVAFHFRHACADMALRARMLATMGQQLNQLAREQ
SLAVVLTNQMTKRYDSGRNGEEKLVAALGDTWAHAATNRLMLFWKENQRF
ASLLKSSRREPATVPFIVDRVGIRDVPTPKVRPPSSDSAQQSSADDAKRI
RLS*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR016467DNA_recomb/repair_RecA-like
IPR027417P-loop_NTPase
IPR013632DNA_recomb/repair_Rad51_C
IPR020588RecA_ATP-bd
IPR033925Rad51_DMC1_RadA