Trimin1|352800|estExt_Genemark1.C_Ctg_1320015 (polypeptide) Tribonema minus UTEX_B_3156

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
Namejgi.p|Trimin1|352800
Unique NameTrimin1|352800|estExt_Genemark1.C_Ctg_1320015
Typepolypeptide
OrganismTribonema minus UTEX_B_3156 (Tribonema minus UTEX_B_3156 )
Sequence length133
Homology
[Close]
BLAST of jgi.p|Trimin1|352800 vs. uniprot
Match: A0A835ZBQ8_9STRA (FoP_duplication domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZBQ8_9STRA)

HSP 1 Score: 184 bits (468), Expect = 6.340e-58
Identity = 132/132 (100.00%), Postives = 132/132 (100.00%), Query Frame = 0 
Query:    1 MARPQTGVVAAGVVLVAVAAAEAAGHDQVAAVEAGGDGAAGGVAADLDAQMLQYYIKKDPAAAQKALDSSMDDYWKNKDAAAPAEGAAEGTAAEGTDAAAAVXXXXXXXXXXXXXXXXXXXXXXXEAVAEGA 132
            MARPQTGVVAAGVVLVAVAAAEAAGHDQVAAVEAGGDGAAGGVAADLDAQMLQYYIKKDPAAAQKALDSSMDDYWKNKDAAAPAEGAAEGTAAEGTDAAAAVXXXXXXXXXXXXXXXXXXXXXXXEAVAEGA
Sbjct:    1 MARPQTGVVAAGVVLVAVAAAEAAGHDQVAAVEAGGDGAAGGVAADLDAQMLQYYIKKDPAAAQKALDSSMDDYWKNKDAAAPAEGAAEGTAAEGTDAAAAVXXXXXXXXXXXXXXXXXXXXXXXEAVAEGA 132
The following BLAST results are available for this feature:
BLAST of jgi.p|Trimin1|352800 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A835ZBQ8_9STRA6.340e-58100.00FoP_duplication domain-containing protein n=1 Tax=... [more]
back to top
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR025715Chromatin target of PRMT1 protein, C-terminalPFAMPF13865FoP_duplicationcoord: 44..79
e-value: 2.7E-5
score: 24.7
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 73..132

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Contig_132contigContig_132:84144..87047 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Tribonema minus UTEX_B_31562021-06-17
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
jgi.p|Trimin1|352800mRNA_14425Tribonema minus UTEX_B_3156 mRNAContig_132 84144..87077 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Trimin1|352800|estExt_Genemark1.C_Ctg_1320015 ID=Trimin1|352800|estExt_Genemark1.C_Ctg_1320015|Name=jgi.p|Trimin1|352800|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=133bp
MARPQTGVVAAGVVLVAVAAAEAAGHDQVAAVEAGGDGAAGGVAADLDAQ
MLQYYIKKDPAAAQKALDSSMDDYWKNKDAAAPAEGAAEGTAAEGTDAAA
AVAADGTEENGGGDAAKAAAEGVEEEAVAEGA*
back to top
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR025715FoP_C