Trimin1|352793|estExt_Genemark1.C_Ctg_1320004 (polypeptide) Tribonema minus UTEX_B_3156

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
Namejgi.p|Trimin1|352793
Unique NameTrimin1|352793|estExt_Genemark1.C_Ctg_1320004
Typepolypeptide
OrganismTribonema minus UTEX_B_3156 (Tribonema minus UTEX_B_3156 )
Sequence length237
Homology
BLAST of jgi.p|Trimin1|352793 vs. uniprot
Match: A0A835ZDG0_9STRA (CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZDG0_9STRA)

HSP 1 Score: 469 bits (1206), Expect = 5.110e-167
Identity = 236/236 (100.00%), Postives = 236/236 (100.00%), Query Frame = 0
Query:    1 MRGGGADEGVNSRKHRTISRTAPGLLVVGEGSLAEVEGVNTPTLWNVPNILTLARLICVPILGFLFYAPIANRNIWCAALFAGAAITDWLDGWWARKFNIASPFGAFLDPVADKLIVAVAMILLSERLGEWMTVCTSIILCREIAVSALREWMAQIGARGVVKVGMAGKCKTAAQMVALTTLLLLQPSAAPAILPPVAFDAGKWLMIFSAVLTVTSGTGYLQAAWPALMGKDAHGK 236
            MRGGGADEGVNSRKHRTISRTAPGLLVVGEGSLAEVEGVNTPTLWNVPNILTLARLICVPILGFLFYAPIANRNIWCAALFAGAAITDWLDGWWARKFNIASPFGAFLDPVADKLIVAVAMILLSERLGEWMTVCTSIILCREIAVSALREWMAQIGARGVVKVGMAGKCKTAAQMVALTTLLLLQPSAAPAILPPVAFDAGKWLMIFSAVLTVTSGTGYLQAAWPALMGKDAHGK
Sbjct:    1 MRGGGADEGVNSRKHRTISRTAPGLLVVGEGSLAEVEGVNTPTLWNVPNILTLARLICVPILGFLFYAPIANRNIWCAALFAGAAITDWLDGWWARKFNIASPFGAFLDPVADKLIVAVAMILLSERLGEWMTVCTSIILCREIAVSALREWMAQIGARGVVKVGMAGKCKTAAQMVALTTLLLLQPSAAPAILPPVAFDAGKWLMIFSAVLTVTSGTGYLQAAWPALMGKDAHGK 236          
BLAST of jgi.p|Trimin1|352793 vs. uniprot
Match: A0A6H5L2F5_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5L2F5_9PHAE)

HSP 1 Score: 258 bits (660), Expect = 2.130e-82
Identity = 128/200 (64.00%), Postives = 160/200 (80.00%), Query Frame = 0
Query:   33 LAEVEGVNTPTLWNVPNILTLARLICVPILGFLFYAPIANRNIWCAALFAGAAITDWLDGWWARKFNIASPFGAFLDPVADKLIVAVAMILLSERLGEWMTVCTSIILCREIAVSALREWMAQIGARGVVKVGMAGKCKTAAQMVALTTLLLLQPSAAPAIL-PPVAFDAGKWLMIFSAVLTVTSGTGYLQAAWPALMGK 231
            +A++E     TLWNVPNILT+AR++ +P+   +FYA +  RNIWC+A+FAGAA TDWLDG+ AR+  I +PFG+FLDPVADKL+V+ A+ILLSERLG WMTVC++IILCRE+A+SALREWMAQ+G R  VKVG AGK KTA QM+A+T LLLL+P AA  ++ P  A    K L+  S VLTVTSG+GYL+AAWPALMGK
Sbjct:  144 VAKLESAAATTLWNVPNILTMARVMAIPVFATIFYASLPRRNIWCSAIFAGAAFTDWLDGYIARRQGIVTPFGSFLDPVADKLLVSTALILLSERLGPWMTVCSAIILCRELAISALREWMAQLGLRETVKVGNAGKWKTATQMMAITMLLLLEPGAAVTLVNPATAMPIAKSLLYVSTVLTVTSGSGYLKAAWPALMGK 343          
BLAST of jgi.p|Trimin1|352793 vs. uniprot
Match: A0A7S2V0D2_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2V0D2_9STRA)

HSP 1 Score: 203 bits (517), Expect = 1.720e-62
Identity = 113/195 (57.95%), Postives = 136/195 (69.74%), Query Frame = 0
Query:   39 VNTPTLWNVPNILTLARLICVPILGFLFYAPIANRNIWCAALFAGAAITDWLDGWWARKFNIASPFGAFLDPVADKLIVAVAMILLSERLGEWMT-VCTSIILCREIAVSALREWMAQIGARGVVKVGMAGKCKTAAQMVALTTLLLLQPSAAPAILPPVAFDAGKWLMIFSAVLTVTSGTGYLQAAWPALMGKD 232
            V    LWN+PNILT+ R++ +PI  F+FY P+  RN   AA+FA A+ TDWLDG+ ARK+ I SPFGAFLDPVADKL+VA A++LL+   G W+  V  +IIL REI VSALREWMA  G R  V+VGMAGK KTA QMV+L  LLL Q  A   +   +   A   L+  S VLTVTSG GYLQAAWPAL GK+
Sbjct:   22 VQIDNLWNIPNILTMLRVVAIPIFAFVFYLPVPWRNKATAAIFAVASATDWLDGYLARKWKITSPFGAFLDPVADKLMVASALVLLAGSEGGWVVAVPAAIILAREITVSALREWMAGRGERSKVQVGMAGKVKTACQMVSLILLLLAQKGADCPLPVSLLHPAALALLYLSTVLTVTSGWGYLQAAWPALSGKE 216          
BLAST of jgi.p|Trimin1|352793 vs. uniprot
Match: W7TJV8_9STRA (Cdp-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7TJV8_9STRA)

HSP 1 Score: 207 bits (528), Expect = 1.830e-62
Identity = 115/207 (55.56%), Postives = 147/207 (71.01%), Query Frame = 0
Query:   27 VVGEGSLAEVEGVNTPTLWNVPNILTLARLICVPILGFLFYAPIANRNIWCAALFAGAAITDWLDGWWARKFNIASPFGAFLDPVADKLIVAVAMILLSERLGE-WMTVCTSIILCREIAVSALREWMAQIGARGVVKVGMAGKCKTAAQMVALTTLLLLQPS-AAPAILPPVAFDAGKWLMIFSAVLTVTSGTGYLQAAWPALMGK 231
            + G G+ A   G N P+LWN+PNILTL R+I +P+L  ++Y   + RN  C+ LF  AA+TDWLDG+ AR+ N++SP GAFLDPVADKL+VA A++L+++RL    +TV T+II+CREI VSALREWMA  GAR  V VG  GK KTA QM+AL+ LL +QP  A+   L     + G  L+ FSAVLTV S  GY+QAAWPAL GK
Sbjct:  140 MAGGGNAASNRG-NEPSLWNLPNILTLLRVISIPVLIIIYYTSASWRNAACSGLFVFAAMTDWLDGYLARRMNLSSPLGAFLDPVADKLMVATALVLMADRLNSPVVTVSTAIIICREIGVSALREWMASQGARDTVAVGWWGKFKTATQMLALSVLLYVQPPLASHDALAHKLLEVGVGLLAFSAVLTVYSAVGYVQAAWPALTGK 345          
BLAST of jgi.p|Trimin1|352793 vs. uniprot
Match: A0A7S2UZN3_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2UZN3_9STRA)

HSP 1 Score: 203 bits (517), Expect = 5.110e-61
Identity = 113/195 (57.95%), Postives = 136/195 (69.74%), Query Frame = 0
Query:   39 VNTPTLWNVPNILTLARLICVPILGFLFYAPIANRNIWCAALFAGAAITDWLDGWWARKFNIASPFGAFLDPVADKLIVAVAMILLSERLGEWMT-VCTSIILCREIAVSALREWMAQIGARGVVKVGMAGKCKTAAQMVALTTLLLLQPSAAPAILPPVAFDAGKWLMIFSAVLTVTSGTGYLQAAWPALMGKD 232
            V    LWN+PNILT+ R++ +PI  F+FY P+  RN   AA+FA A+ TDWLDG+ ARK+ I SPFGAFLDPVADKL+VA A++LL+   G W+  V  +IIL REI VSALREWMA  G R  V+VGMAGK KTA QMV+L  LLL Q  A   +   +   A   L+  S VLTVTSG GYLQAAWPAL GK+
Sbjct:  135 VQIDNLWNIPNILTMLRVVAIPIFAFVFYLPVPWRNKATAAIFAVASATDWLDGYLARKWKITSPFGAFLDPVADKLMVASALVLLAGSEGGWVVAVPAAIILAREITVSALREWMAGRGERSKVQVGMAGKVKTACQMVSLILLLLAQKGADCPLPVSLLHPAALALLYLSTVLTVTSGWGYLQAAWPALSGKE 329          
BLAST of jgi.p|Trimin1|352793 vs. uniprot
Match: A0A7Y5D988_LYSSP (CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase n=1 Tax=Lysobacter sp. TaxID=72226 RepID=A0A7Y5D988_LYSSP)

HSP 1 Score: 179 bits (455), Expect = 3.470e-53
Identity = 101/190 (53.16%), Postives = 129/190 (67.89%), Query Frame = 0
Query:   46 NVPNILTLARLICVPILGFLFYAPIANRNIWCAALFAGAAITDWLDGWWARKFNIASPFGAFLDPVADKLIVAVAMILLSE-RLGEWMTVCTSIILCREIAVSALREWMAQIGARGVVKVGMAGKCKTAAQMVALTTLLL-LQPSAAPAILP-PVAFDAGKWLMIFSAVLTVTSGTGYLQAAWPALMGKD 232
             VP +LTLAR++ +P+L  +FY P    N   AA+FA AA+TDWLDGW AR++++ S FGAFLDPVADKL+VAVA+ L+ +     WM    ++I+ REIAVSALREWMA+IG R  VKV + GK KT AQM AL  LL  + P   PA  P  V F  G W++  +A+LT+ SG  YL AAWPALM  +
Sbjct:    4 TVPTMLTLARIVMIPVLVLVFYLPYKWSNFASAAVFALAAVTDWLDGWIARRYDLHSAFGAFLDPVADKLMVAVALFLIVQGHPTPWMAFWAAVIVGREIAVSALREWMAEIGQRATVKVAVIGKIKTMAQMFALLCLLYSVVPGVKPAPWPGDVIFHTGDWMLAAAALLTLWSGAQYLIAAWPALMADE 193          
BLAST of jgi.p|Trimin1|352793 vs. uniprot
Match: A0A521V6W3_9GAMM (CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase n=2 Tax=Xanthomonadaceae TaxID=32033 RepID=A0A521V6W3_9GAMM)

HSP 1 Score: 179 bits (453), Expect = 4.510e-53
Identity = 99/191 (51.83%), Postives = 129/191 (67.54%), Query Frame = 0
Query:   46 NVPNILTLARLICVPILGFLFYAPIANRNIWCAALFAGAAITDWLDGWWARKFNIASPFGAFLDPVADKLIVAVAMILLSE-RLGEWMTVCTSIILCREIAVSALREWMAQIGARGVVKVGMAGKCKTAAQMVALTTLLL-LQPSAAPAILP---PVAFDAGKWLMIFSAVLTVTSGTGYLQAAWPALMGK 231
             +P ILTL R+  +P+L  +++ P    N   AA+FA A+ITDWLDGW AR+F + S FGAFLDPVADKL+V+ A+ L+ +     WM +  ++I+ REIAVSALREWMA++G RG V V   GK KT AQMVALT LL  + PS  P   P    + F  G WL+  +A+LT+ SG GYL+AAWP+L GK
Sbjct:    4 TLPTILTLIRIALIPVLAAVYFLPYGWTNFAAAAVFAFASITDWLDGWIARRFGMTSAFGAFLDPVADKLMVSTALFLIVQGHPTAWMALWAAVIVGREIAVSALREWMAEVGQRGKVAVAAIGKFKTVAQMVALTCLLYSVTPSQPPHPTPWMGNLIFHIGDWLLAIAALLTLWSGLGYLRAAWPSLQGK 194          
BLAST of jgi.p|Trimin1|352793 vs. uniprot
Match: UPI001389785E (CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase n=1 Tax=Pseudoxanthomonas taiwanensis TaxID=176598 RepID=UPI001389785E)

HSP 1 Score: 179 bits (453), Expect = 6.540e-53
Identity = 100/190 (52.63%), Postives = 125/190 (65.79%), Query Frame = 0
Query:   48 PNILTLARLICVPILGFLFYAPIANRNIWCAALFAGAAITDWLDGWWARKFNIASPFGAFLDPVADKLIVAVAMILLSE-RLGEWMTVCTSIILCREIAVSALREWMAQIGARGVVKVGMAGKCKTAAQMVALTTLLL-LQPSAAPA--ILPPVAFDAGKWLMIFSAVLTVTSGTGYLQAAWPALMGKDA 233
            P  LTLAR++ +P+L  +FY P    N   A +F  AA+TDWLDGWWAR++   S FGAFLDPVADK++VAVA+ L+ +     WM    ++I+ REIAVSALREWMA+IG R  VKV M GK KT AQMVAL  LL  + P+ AP    L    F  G WL+  +A+LT+ SG  YL AAWPAL   +A
Sbjct:    6 PTWLTLARIVMIPVLVLVFYLPYRWTNFAAAGVFILAAVTDWLDGWWARRYQQHSAFGAFLDPVADKMMVAVALFLIVQGHPTPWMAFWAAVIVGREIAVSALREWMAEIGQRATVKVAMIGKIKTTAQMVALACLLYSVSPNRAPTGIWLGEFVFHVGDWLLAIAALLTLWSGGQYLYAAWPALRADEA 195          
BLAST of jgi.p|Trimin1|352793 vs. uniprot
Match: A0A370DFG8_9GAMM (CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase n=6 Tax=Bacteria TaxID=2 RepID=A0A370DFG8_9GAMM)

HSP 1 Score: 176 bits (447), Expect = 3.210e-52
Identity = 96/189 (50.79%), Postives = 130/189 (68.78%), Query Frame = 0
Query:   44 LWNVPNILTLARLICVPILGFLFYAPIANRNIWCAALFAGAAITDWLDGWWARKFNIASPFGAFLDPVADKLIVAVAMILLSE-RLGEWMTVCTSIILCREIAVSALREWMAQIGARGVVKVGMAGKCKTAAQMVALTTLLLLQPSAAPAILPPVAFDAGKWLMIFSAVLTVTSGTGYLQAAWPALMGK 231
            +WN+PN+LTL R++ +P+   +FY P+    I CAA+FA AA+TDWLDG+ AR++   SPFGAFLDPVADKL+VAVA++LL +     W+ +  +II+ REI +SALREWMA +GAR  V V + GK KTAAQM+A+  L++ Q      I        G  L+  SA+LT+ S   YL+AAWP+LMGK
Sbjct:    1 MWNIPNLLTLLRIVLIPVFVLIFYLPVEWARIGCAAVFALAAVTDWLDGFLARRWGQVSPFGAFLDPVADKLMVAVALLLLVQSEPTPWLALPAAIIIGREITISALREWMAALGARAQVAVSVIGKFKTAAQMLAILLLIIQQDLWGLPI-----HTVGFVLLYISAILTLWSMVIYLRAAWPSLMGK 184          
BLAST of jgi.p|Trimin1|352793 vs. uniprot
Match: A0A5B2ZB81_9GAMM (CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase n=1 Tax=Arenimonas fontis TaxID=2608255 RepID=A0A5B2ZB81_9GAMM)

HSP 1 Score: 176 bits (445), Expect = 5.020e-52
Identity = 97/187 (51.87%), Postives = 126/187 (67.38%), Query Frame = 0
Query:   46 NVPNILTLARLICVPILGFLFYAPIANRNIWCAALFAGAAITDWLDGWWARKFNIASPFGAFLDPVADKLIVAVAMILLSERLGE-WMTVCTSIILCREIAVSALREWMAQIGARGVVKVGMAGKCKTAAQMVALTTLLLLQPSAAPAILPPVAFDAGKWLMIFSAVLTVTSGTGYLQAAWPALMGK 231
             +P +LTL R++ +P+L  +FY P A  NI  AA+F   A TDWLDGW AR+F + S FGAFLDPVADKL VA A++L+ ER    WM + ++II+ REI +SALREWMAQ+GA G+VKV   GK KT  QMVA+T LL  +      +L    F  G+WL+  +A LT+ SG  YL+AAWPA+  K
Sbjct:    4 TIPTLLTLFRILLIPVLVAVFYLPYAWTNIAAAAIFLLGASTDWLDGWIARRFRMFSAFGAFLDPVADKLTVAFALLLVVERHDTPWMALLSAIIIGREITISALREWMAQVGAHGLVKVAGLGKLKTIVQMVAITCLLFEED-----LLGLPVFRIGEWLLAVAATLTLWSGWDYLRAAWPAMRQK 185          
The following BLAST results are available for this feature:
BLAST of jgi.p|Trimin1|352793 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A835ZDG0_9STRA5.110e-167100.00CDP-diacylglycerol--glycerol-3-phosphate 3-phospha... [more]
A0A6H5L2F5_9PHAE2.130e-8264.00Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
A0A7S2V0D2_9STRA1.720e-6257.95Hypothetical protein n=1 Tax=Fibrocapsa japonica T... [more]
W7TJV8_9STRA1.830e-6255.56Cdp-diacylglycerol--glycerol-3-phosphate 3-phospha... [more]
A0A7S2UZN3_9STRA5.110e-6157.95Hypothetical protein n=1 Tax=Fibrocapsa japonica T... [more]
A0A7Y5D988_LYSSP3.470e-5353.16CDP-diacylglycerol--glycerol-3-phosphate 3-phospha... [more]
A0A521V6W3_9GAMM4.510e-5351.83CDP-diacylglycerol--glycerol-3-phosphate 3-phospha... [more]
UPI001389785E6.540e-5352.63CDP-diacylglycerol--glycerol-3-phosphate 3-phospha... [more]
A0A370DFG8_9GAMM3.210e-5250.79CDP-diacylglycerol--glycerol-3-phosphate 3-phospha... [more]
A0A5B2ZB81_9GAMM5.020e-5251.87CDP-diacylglycerol--glycerol-3-phosphate 3-phospha... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR043130CDP-alcohol phosphatidyltransferase, transmembrane domainGENE3D1.20.120.1760coord: 41..227
e-value: 1.8E-33
score: 118.0
IPR004570CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferaseTIGRFAMTIGR00560TIGR00560coord: 46..227
e-value: 4.0E-45
score: 152.5
IPR000462CDP-alcohol phosphatidyltransferasePFAMPF01066CDP-OH_P_transfcoord: 46..113
e-value: 2.6E-16
score: 60.1
IPR000462CDP-alcohol phosphatidyltransferasePROSITEPS00379CDP_ALCOHOL_P_TRANSFcoord: 91..113
NoneNo IPR availablePANTHERPTHR14269:SF11CARDIOLIPIN SYNTHASE (CMP-FORMING)coord: 42..224
NoneNo IPR availablePANTHERPTHR14269CDP-DIACYLGLYCEROL--GLYCEROL-3-PHOSPHATE 3-PHOSPHATIDYLTRANSFERASE-RELATEDcoord: 42..224

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Contig_132contigContig_132:13035..14906 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Tribonema minus UTEX_B_31562021-06-17
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
jgi.p|Trimin1|352793mRNA_14416Tribonema minus UTEX_B_3156 mRNAContig_132 13035..14947 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Trimin1|352793|estExt_Genemark1.C_Ctg_1320004 ID=Trimin1|352793|estExt_Genemark1.C_Ctg_1320004|Name=jgi.p|Trimin1|352793|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=237bp
MRGGGADEGVNSRKHRTISRTAPGLLVVGEGSLAEVEGVNTPTLWNVPNI
LTLARLICVPILGFLFYAPIANRNIWCAALFAGAAITDWLDGWWARKFNI
ASPFGAFLDPVADKLIVAVAMILLSERLGEWMTVCTSIILCREIAVSALR
EWMAQIGARGVVKVGMAGKCKTAAQMVALTTLLLLQPSAAPAILPPVAFD
AGKWLMIFSAVLTVTSGTGYLQAAWPALMGKDAHGK*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR043130CDP-OH_PTrfase_TM_dom
IPR004570Phosphatidylglycerol_P_synth
IPR000462CDP-OH_P_trans