Trimin1|352778|estExt_Genemark1.C_Ctg_1310038 (polypeptide) Tribonema minus UTEX_B_3156

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
Namejgi.p|Trimin1|352778
Unique NameTrimin1|352778|estExt_Genemark1.C_Ctg_1310038
Typepolypeptide
OrganismTribonema minus UTEX_B_3156 (Tribonema minus UTEX_B_3156 )
Sequence length332
Homology
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BLAST of jgi.p|Trimin1|352778 vs. uniprot
Match: A0A835ZAT6_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZAT6_9STRA)

HSP 1 Score: 216 bits (550), Expect = 1.430e-64
Identity = 289/289 (100.00%), Postives = 289/289 (100.00%), Query Frame = 0 
Query:   43 RGVCLRGVRIRGLRRCCSXXXXXXXXXXXXXXXXXXXXXWLRGRRRRXXXCGXXXXXXXXXXXXXXXXXXXXHCDRLRRRDRVCIHVLLLLLXRXXXXXRHSCRLXXXXXXXXXXXXXXXXXTVDLRXXXXXXXXXXXXXXXWHRRWXCXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGSCGRGIRGVDGARGGRGRGPTGHRRGGGAGDWGRGASRRSWRGAARGRGRGRCAAXXXXXXXXXXXXXXEAHSWGGCLRPR 331
            RGVCLRGVRIRGLRRCCSXXXXXXXXXXXXXXXXXXXXXWLRGRRRRXXXCGXXXXXXXXXXXXXXXXXXXXHCDRLRRRDRVCIHVLLLLLXRXXXXXRHSCRLXXXXXXXXXXXXXXXXXTVDLRXXXXXXXXXXXXXXXWHRRWXCXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGSCGRGIRGVDGARGGRGRGPTGHRRGGGAGDWGRGASRRSWRGAARGRGRGRCAAXXXXXXXXXXXXXXEAHSWGGCLRPR
Sbjct:   43 RGVCLRGVRIRGLRRCCSXXXXXXXXXXXXXXXXXXXXXWLRGRRRRXXXCGXXXXXXXXXXXXXXXXXXXXHCDRLRRRDRVCIHVLLLLLXRXXXXXRHSCRLXXXXXXXXXXXXXXXXXTVDLRXXXXXXXXXXXXXXXWHRRWXCXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGSCGRGIRGVDGARGGRGRGPTGHRRGGGAGDWGRGASRRSWRGAARGRGRGRCAAXXXXXXXXXXXXXXEAHSWGGCLRPR 331
The following BLAST results are available for this feature:
BLAST of jgi.p|Trimin1|352778 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A835ZAT6_9STRA1.430e-64100.00Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 250..294

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Contig_131contigContig_131:270941..271936 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Tribonema minus UTEX_B_31562021-06-17
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
jgi.p|Trimin1|352778mRNA_13633Tribonema minus UTEX_B_3156 mRNAContig_131 269662..271936 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Trimin1|352778|estExt_Genemark1.C_Ctg_1310038 ID=Trimin1|352778|estExt_Genemark1.C_Ctg_1310038|Name=jgi.p|Trimin1|352778|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=332bp
RGGGGSVHRLLLLLLHGRSIRRLRRRERGLLLHHDDGLRRRRRGVCLRGV
RIRGLRRCCSHNGDRLRRRRRRVLLNRVRVRWLRGRRRRRRRCGRLLLLR
GRHRHRLSCWRRRRHCDRLRRRDRVCIHVLLLLLLRWRRRRRHSCRLWRR
RRRRLLRYWRRRRRTVDLRRRRRNRVCKGGLRRRWHRRWRCRVAVRRCGG
RRRRQHGGRGRRRWCSWLLVQRRRRGPLGRCRRRRWRRCIGRPRGRGRGG
SCGRGIRGVDGARGGRGRGPTGHRRGGGAGDWGRGASRRSWRGAARGRGR
GRCAAWGRRRGHLPRRGRREAHSWGGCLRPR*
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