Trimin1|352706|estExt_Genemark1.C_Ctg_1290017 (polypeptide) Tribonema minus UTEX_B_3156

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
Namejgi.p|Trimin1|352706
Unique NameTrimin1|352706|estExt_Genemark1.C_Ctg_1290017
Typepolypeptide
OrganismTribonema minus UTEX_B_3156 (Tribonema minus UTEX_B_3156 )
Sequence length292
Homology
BLAST of jgi.p|Trimin1|352706 vs. uniprot
Match: A0A835ZFQ3_9STRA (SGF29 tudor-like domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZFQ3_9STRA)

HSP 1 Score: 551 bits (1421), Expect = 5.970e-198
Identity = 291/291 (100.00%), Postives = 291/291 (100.00%), Query Frame = 0
Query:    1 MAHIEDFLDAISTIPNEVKRSLYLIRSLDKSNKDGSAELAEAERNFISVSLLLDEKGTREAKRKLRERTDRDRDVEPAKLVEDPVALADIAAKRAKCQQIADEKVAIADQMHDYVAAHLRRLTRDLAVMDEMLETSGLRTGTAAAASLGGSGGSGSGSRFDEPIAMKGEEVAVKPERHEDLWVLGRVKEYDANSGLYLVMDEDDNSKDYKVDEVDVVVLGSGTKLSKGESVMAVYPDTTSFYKAVISVPPRRGSQIHSTTASVQFEDDADDSGMTPHRVILTKHIMPLPNT 291
            MAHIEDFLDAISTIPNEVKRSLYLIRSLDKSNKDGSAELAEAERNFISVSLLLDEKGTREAKRKLRERTDRDRDVEPAKLVEDPVALADIAAKRAKCQQIADEKVAIADQMHDYVAAHLRRLTRDLAVMDEMLETSGLRTGTAAAASLGGSGGSGSGSRFDEPIAMKGEEVAVKPERHEDLWVLGRVKEYDANSGLYLVMDEDDNSKDYKVDEVDVVVLGSGTKLSKGESVMAVYPDTTSFYKAVISVPPRRGSQIHSTTASVQFEDDADDSGMTPHRVILTKHIMPLPNT
Sbjct:    1 MAHIEDFLDAISTIPNEVKRSLYLIRSLDKSNKDGSAELAEAERNFISVSLLLDEKGTREAKRKLRERTDRDRDVEPAKLVEDPVALADIAAKRAKCQQIADEKVAIADQMHDYVAAHLRRLTRDLAVMDEMLETSGLRTGTAAAASLGGSGGSGSGSRFDEPIAMKGEEVAVKPERHEDLWVLGRVKEYDANSGLYLVMDEDDNSKDYKVDEVDVVVLGSGTKLSKGESVMAVYPDTTSFYKAVISVPPRRGSQIHSTTASVQFEDDADDSGMTPHRVILTKHIMPLPNT 291          
BLAST of jgi.p|Trimin1|352706 vs. uniprot
Match: D7FYG8_ECTSI (SGF29 C-terminal domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FYG8_ECTSI)

HSP 1 Score: 188 bits (478), Expect = 4.190e-55
Identity = 119/288 (41.32%), Postives = 169/288 (58.68%), Query Frame = 0
Query:    4 IEDFLDAISTIPNEVKRSLYLIRSLDKSNKDGSAELAEAERNFISVSLLLDEKGTREAKRKLRERTDRDRDVEPAKLVEDPVALADIAAKRAKCQQIADEKVAIADQMHDYVAAHLRRLTRDLAVMDEMLETSGLRTGTAAAASLGGSGGSGSGSRFDEPIAMKGEEVAVKPERHEDLWVLGRVKEYDANSGLYLVMDEDDNSKDYKVDEVDVVVL-GSGTKLSKGESVMAVYPDTTSFYKAVISVPPRRGSQI-HSTTASVQFEDDADDSGMTPHRVILTKHIMPLP 289
            ++DF+D ++T+PNE++R+  L+R+LDK     S+EL      F+            +A+ K++ R D  ++++P  LV+DP  +A+I +  ++ +QI DEKVAIADQ H  VA  L+RLT DLA  ++ L + G                      FD   A  G++VA + +   D WVLGRV  +   +G Y VMDEDDNSK   +DE  V+ L G   +LSKG+ V+AVY DTTSFY A I++PPR   QI +  TA VQF DDAD+ G+TPHR +   HI+ LP
Sbjct:   14 VDDFMDGMTTMPNEIRRNSQLMRTLDKDAHGLSSELEALHNKFLG-----------QAREKMKARGD-SQELDPKVLVDDPPLMAEIDSLFSRTKQIVDEKVAIADQTHQMVADRLKRLTTDLASFEQTLHSQG---------------------EFDVGAAQPGDQVAFQEDPEAD-WVLGRVLSWMHETGQYEVMDEDDNSKKLTMDEHQVIPLEGRTERLSKGDDVLAVYVDTTSFYHATIAIPPRGRGQIGNGGTAHVQFVDDADEHGVTPHRAVPIIHIIKLP 267          
BLAST of jgi.p|Trimin1|352706 vs. uniprot
Match: A0A7S2W6R2_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2W6R2_9STRA)

HSP 1 Score: 152 bits (384), Expect = 3.510e-41
Identity = 101/290 (34.83%), Postives = 155/290 (53.45%), Query Frame = 0
Query:    4 IEDFLDAISTIPNEVKRSLYLIRSLDKSNKDGSAELAEAERNFISVSLLLDEKGTREAKRKLRERTDRDRDVEPAKLVEDPVALADIAAKRAKCQQIADEKVAIADQMHDYVAAHLRRLTRDLAVMDEMLETSGLRTGTAAAASLGGSGGSGSGSRFDEPIAMKGEEVAVKPERHEDLWVLGRVKEYDANSGLYLVMDEDDNSKDYKVDEVDVVVLGSGTKLSKGESVMAVYPDTTSFYKAVI-SVPPRRGSQI--HSTTASVQFEDDADDSGMTPHRVILTKHIMPLPN 290
            +ED++D++S +PN+++R + L+R LDK     S EL + E+  +S           E K++ R+            L +      DIAAKR + +Q+ DEKV +++QM D    HL RL +D+   ++ L  +G                      +   +A  G++VAV+ E     W+LGRV EYD  +G+Y V DED+  K ++V +  ++ L    KLSKGE V+AVYPDTTSFY A++ SV  + G  +   S+  +VQF DD DDSG+ P R +   HI+  P+
Sbjct:   13 LEDYVDSLSGLPNDLRRLVELMRDLDKEGTSVSKELEDTEKKVLS-----------ELKKRQRQ---------TGNLGDYTAVKEDIAAKRRRAEQMVDEKVQVSEQMVDLCDVHLTRLQQDIRRFEDYLRANG---------------------EYSAGVASAGDQVAVQVEEE---WILGRVWEYDIAAGVYTVGDEDEAEKTFQVSDAHIIRLEQ-LKLSKGEEVLAVYPDTTSFYPAIVTSVSRKMGGALAGDSSFCTVQFHDDEDDSGINPDRSVKILHIIRPPD 257          
BLAST of jgi.p|Trimin1|352706 vs. uniprot
Match: A0A7S2G351_9STRA (Hypothetical protein n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2G351_9STRA)

HSP 1 Score: 131 bits (330), Expect = 5.710e-34
Identity = 77/202 (38.12%), Postives = 114/202 (56.44%), Query Frame = 0
Query:   90 IAAKRAKCQQIADEKVAIADQMHDYVAAHLRRLTRDLAVMDEMLETSGLRTGTAAAASLGGSGGSGSGSRFDEPIAMKGEEVAVKPERHEDLWVLGRVKEYDANSGLYLVMDEDDNSKDYKVDEVDVVVLGSGTKLSKGESVMAVYPDTTSFYKAVISVPPRRGSQIHS--TTASVQFEDDADDSGMTPHRVILTKHIMPLP 289
            +A+KR +  Q+A EKV I++Q ++    ++ +L  +L   +E L TSG                      F    A  G++VA KP+     W+L RV+EYD NSG Y ++DEDD +K Y V E  VV+L  G +L++GE V A+YPDTTSFY AV++  PRR +   +     +VQF DDAD++G  P R I  ++++  P
Sbjct:    9 LASKRQRAHQMAGEKVQISEQAYNLAENYINKLDLELGKFEEHLRTSG---------------------EFSASGASPGDQVAAKPDEE---WILARVQEYDINSGFYTLLDEDDQNKTYSVSESFVVML-EGARLTRGEEVYAIYPDTTSFYPAVVTSAPRRSASAANGPVFCTVQFHDDADETGNNPDRQIALQYVIRPP 185          
BLAST of jgi.p|Trimin1|352706 vs. uniprot
Match: A0A7S2UAL2_9STRA (Hypothetical protein n=1 Tax=Attheya septentrionalis TaxID=420275 RepID=A0A7S2UAL2_9STRA)

HSP 1 Score: 121 bits (304), Expect = 5.370e-29
Identity = 98/309 (31.72%), Postives = 160/309 (51.78%), Query Frame = 0
Query:    4 IEDFLDAISTIPNEVKRSLYLIRSLDKSNKDGSAELAEAERNFISVS---------LLLDEKGTREAKRKLRERTD---------RDRDV----EPAKLVEDPVALADIAAKRAKCQQIADEKVAIADQMHDYVAAHLRRLTRDLAVMDEMLETSGLRTGTAAAASLGGSGGSGSGSRFDEPIAMKGEEVAVKPERHEDLWVLGRVKEYDANSGLYLVMDED-DNSKDYKVDEVDVVVLGSGTKLSKGESVMAVYPDTTSFYKAVISVPPRRGSQIHSTTASVQFEDDADDSGMTPHRVILTKHIMPLP 289
            +E F++ IST+P+E++R+L L++ LDKS     +EL +A+  +++ +         LL ++        K +   D         R RD+    E    VEDP  L  I+  R +  Q+ +EKVAIADQ +  + + ++RL +D+A  + +L+     TG    A +GG        + D+  A     V V P   +  W+L +V  ++  +G Y + DED +++K + + E  VVVL    +LS+G+ + AVYPDTTSFY A +    R+      T   V F+DD D+ G+T  + +L KH+M  P
Sbjct:    9 LESFIENISTLPHELRRNLELMKDLDKSCSAVVSELQQAQVEYVTAARAKIDALPVLLQNDNXXXXXXXKSQGTGDEQPNNNTKGRKRDLPTTEELVAYVEDPPPLWHISKLRRQASQLVEEKVAIADQAYSLIQSTVQRLDKDIAEFETLLKG----TGEFEVAVVGGG-------KPDDLAA-----VQVTPSSPD--WILAKVISHNRETGTYKLSDEDVESNKIFTLPESQVVVLNILERLSRGDMIYAVYPDTTSFYPATVVQSARK------TFVMVNFKDDGDEHGVTHDKAVLLKHVMRPP 293          
BLAST of jgi.p|Trimin1|352706 vs. uniprot
Match: A0A1Z5KGC0_FISSO (SAGA-associated factor 29 n=2 Tax=Fistulifera solaris TaxID=1519565 RepID=A0A1Z5KGC0_FISSO)

HSP 1 Score: 120 bits (301), Expect = 1.090e-28
Identity = 91/307 (29.64%), Postives = 152/307 (49.51%), Query Frame = 0
Query:    3 HIEDFLDAISTIPNEVKRSLYLIRSLDKSNKDGSAELAE--------AERNFISVSLLLDEKGTREAKRKLRERTDRDRDVEPAKLV-----------EDPVALADIAAKRAKCQQIADEKVAIADQMHDYVAAHLRRLTRDLAVMDEMLETSGLRTGTAAAASLGGSGGSGSGSRFDEPIAMKGEEVAVKPERHEDLWVLGRVKEYDANSGLYLVMDED-DNSKDYKVDEVDVVVLGSGTKLSKGESVMAVYPDTTSFYKAVISVPPRRGSQIHSTTASVQFEDDADDSGMTPHRVILTKHIMPLP 289
            ++E F+++++T+P +V+R+L L++ LD+S +   A+L E        AE   + + +   E G          R  R  D E A ++            D  A+  I A +A C Q ADEKV +A Q ++++ A + RL  DL  + ++L+  G                      F +    +  ++A      E  W+L +V E+D  +  Y ++DED ++ K + + E  VV+L    +LSKG++V AVYPDTTSFY+A +   PR+ +   S    V F DD+D+ G+T  + +  +HIM  P
Sbjct:    8 YLESFVESLTTLPYQVRRNLELVQDLDRSYQSDLAKLQELYTAYLQQAEEKVLQLEVAPMETGKGV-------RVIRKEDAEKAPIIIPTTAELMAYTYDADAMRQIEALQADCLQKADEKVCVARQAYEWIDAVVERLDDDLQALSKILQAQG---------------------EFQQEEVAQPNDLAACQLGTE--WILAKVLEFDTKTRTYKLVDEDVESHKVFHLPEDQVVILRGVDRLSKGDTVFAVYPDTTSFYQATVVQVPRKTAGQSSPFVIVSFMDDSDEFGVTHDKTVQLQHIMVPP 284          
BLAST of jgi.p|Trimin1|352706 vs. uniprot
Match: B7G1U2_PHATC (Predicted protein n=1 Tax=Phaeodactylum tricornutum (strain CCAP 1055/1) TaxID=556484 RepID=B7G1U2_PHATC)

HSP 1 Score: 115 bits (289), Expect = 1.780e-26
Identity = 89/296 (30.07%), Postives = 146/296 (49.32%), Query Frame = 0
Query:    3 HIEDFLDAISTIPNEVKRSLYLIRSLDKSNKDGSAELAEAERNFI--------SVSLLLDEKGTREAKRKLRERTDRDRDVEPAKLVEDPVALADIAAKRAKCQQIADEKVAIADQMHDYVAAHLRRLTRDLAVMDEMLETSGLRTGTAAAASLGGSGGSGSGSRFDEPIAMKGEEVAVKPERHEDLWVLGRVKEYDANSGLYLVMDED-DNSKDYKVDEVDVVVLGSGTKLSKGESVMAVYPDTTSFYKAVISVPPRRGSQIHSTTASVQFEDDADDSGMTPHRVILTKHIMPLP 289
            ++E F++ +ST+P+EV+R++ LI+ LDK++      L + ++ +I         + L+  E GT   +             E  + V++      I   +  C Q ADEK+AIA Q  D + A  +RL  DL  M+ +L+ +G                     +  E    K  ++A      E  W+L +V  +D  +G+Y + DED +++K + + E  V++L +  KL  G+SV AVYPDTTSFY A +   PR+ S    T   V F DD+D+ G+T  + +  K+ MP P
Sbjct:   66 YLEAFIETLSTLPHEVRRNMDLIKDLDKASGVRGETLRQLQQRYIHQAEDKMMQLELVEREDGTHGVRVIDGTEVIIPTTYELVEYVQNAELERQIQQAQEDCLQKADEKIAIAQQALDRIDAVCQRLDHDLGAMELLLQNTG-------------------DFQTQETKTAKPNDLAACQITPESEWILAKVVTFDPQTGVYKLADEDVESNKLFTLPESQVIILYAIEKLRAGDSVYAVYPDTTSFYPATVVQAPRKASTPFVT---VNFVDDSDEFGVTHDKFVPLKYTMPPP 339          
BLAST of jgi.p|Trimin1|352706 vs. uniprot
Match: A0A6V2GR38_9STRA (Hypothetical protein n=2 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A6V2GR38_9STRA)

HSP 1 Score: 112 bits (280), Expect = 3.120e-25
Identity = 69/197 (35.03%), Postives = 113/197 (57.36%), Query Frame = 0
Query:   94 RAKCQQIADEKVAIADQMHDYVAAHLRRLTRDLAVMDEMLETSGLRTGTAAAASLGGSGGSGSGSRFDEPIAMKGEEVAVKPERHEDLWVLGRVKEYDANSGLYLVMDED-DNSKDYKVDEVDVVVLGSGTKLSKGESVMAVYPDTTSFYKAVISVPPRRGSQIHSTTASVQFEDDADDSGMTPHRVILTKHIMPLP 289
            + KC ++A EK+ +A+Q +  V A +RRL  DLA  + +L+     TG   A+  GG             +A   +  A++   +   W+L +V  +D  +G+Y + DED +++K + + E  VVVLG   +LS+G+ + AVYPDTTSFY+A ++  PR+ S   S    V F+DD D++G+T  + +L KH+M +P
Sbjct:  154 KQKCFKLAQEKILVANQAYSVVDAAVRRLDFDLAKFETLLKN----TGEFEASLFGG-------------VAKPNDLAAIQVNPNSTDWILAKVISHDLGTGMYKLSDEDVESNKIFNLPESQVVVLGGVDRLSRGDIIYAVYPDTTSFYQATVAQAPRKVSGGGSFVM-VNFKDDGDENGVTHDKAVLMKHVMRVP 332          
BLAST of jgi.p|Trimin1|352706 vs. uniprot
Match: A0A7S4A4V8_9STRA (Hypothetical protein n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A7S4A4V8_9STRA)

HSP 1 Score: 111 bits (277), Expect = 4.570e-25
Identity = 95/315 (30.16%), Postives = 151/315 (47.94%), Query Frame = 0
Query:    4 IEDFLDAISTIPNEVKRSLYLIRSLDKSNKDGSAELAEAERNFISVSL-LLDEKGTREAKRKLRERTDRDRDVEPAKLVEDPVA----LADIAAKRAKCQQIADEKVAIADQMHDYVAAHLRRLTRDLAVMDEMLETSGLRTGTAAAASLGGSGGSGSGSRFDEPIAMK-GEEVAVKPERHE-DLWVLGRVKEYDANSGLYLVMDEDDNSKDYKVDEVDVVVL---GSGT---------------------KLSKGESVMAVYPDTTSFYKAVISVPPRR-GSQIHSTTASVQFEDDADDSGMTPHRVILTKHIM 286
            IED L+ I+ +   VKR+L LIR L  +    ++EL   E+    V   +++E   R A  K            PAK +E+ +       + A KR +C  + +E + +A Q    VA H+  +  +LA + + L  +G                      F+   A + G+EVAV+ + ++ + WVLGRV  Y ++  LY V D DD+ K +++    V+ L   G G                      +L KG+ V  +YPDTTSFY+ V+++P RR GSQ    T   QF+DDAD++G+TP R +  K+++
Sbjct:   21 IEDLLEVITPVSGLVKRNLDLIRQLGAT---ATSELEAVEKEEAKVEKDVIEELDKRAAAAK------------PAKKLEEVIGDKKDFEERAEKRRRCDGLFEEAIEVARQTEVAVARHIDHIDGELANLSQHLHATG---------------------EFENAGAARPGDEVAVRLDDYDKEAWVLGRVVRYRSDEDLYEVADADDDRKVFELGATRVIPLTDTGRGVPPAHVLCGAQSCLVDAHDEANRLQKGDEVFGIYPDTTSFYQCVVTIPARRSGSQ--GGTCHCQFQDDADETGITPDRPVPLKYVL 297          
BLAST of jgi.p|Trimin1|352706 vs. uniprot
Match: A0A4D9CMQ3_9STRA (SGF29 C-terminal domain-containing protein n=3 Tax=Monodopsidaceae TaxID=425072 RepID=A0A4D9CMQ3_9STRA)

HSP 1 Score: 110 bits (274), Expect = 1.620e-24
Identity = 102/335 (30.45%), Postives = 151/335 (45.07%), Query Frame = 0
Query:    3 HIEDFLDAISTIPNEVKRSLYLIRSLDKSNKDGSAELAEAERNFISVSLLLDEKGTREAKRKLRERTDRDRDVEPAKLVEDPVALADIAAKRAKCQQIADEKVAIADQ----------------------MHDYVAAHLRRLTRDLAVMDEMLETSGLRTGTAAAASLGGSGGSGSGSRFDEPIAMKGEEVAVKPERHEDLWVLGRVKEYDANSGLYLVMDEDDNSKDYKVDEVDVVVLGSGT-----KLSKGESVMAVYPDTTSFY-----------------KAV--ISVPPRRGSQIHSTTA------SVQFEDDADDSGMTPHRVILTKHI 285
            ++EDFL+ +  +PN+++RS +L+R LDK   +    L   E+ ++            +AKR L+   +  +  E  KLVED  A A+IA  RA       EK+ + +Q                      + D +  H+R L  D+      L  +G                      +D   A K + VA K   +E  +VLG+V  Y A+SG Y V+D DD+S  Y + E  +V+L  G+     K  KG+ V AVYP+TTSFY                 +AV  I+ PPRRG   HS         +VQF+DDAD+ G TP R +  +H+
Sbjct:   13 YLEDFLERLQPLPNDIQRSFHLMRELDKDATELHVRLRGLEKQYLG-----------QAKRSLQGAKE-SKPEERLKLVEDKEASAEIADLRALIMAKQREKIDVVNQAGMGGGRDEGRRGRGKGIVGPSVSDMMKHHMRMLKVDMDNFQTELRETG---------------------EYDFLGARKDDAVAFKQNVYETHFVLGKVVNYRADSGAYEVVDVDDDSHIYTLPETQIVLLNPGSEAQRLKYQKGDEVFAVYPETTSFYLGGQGGRXXXXXXXXXXQAVGTIAQPPRRGMG-HSGLGQDVPKLAVQFQDDADEFGHTPIRWVPVQHV 313          
The following BLAST results are available for this feature:
BLAST of jgi.p|Trimin1|352706 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A835ZFQ3_9STRA5.970e-198100.00SGF29 tudor-like domain-containing protein n=1 Tax... [more]
D7FYG8_ECTSI4.190e-5541.32SGF29 C-terminal domain-containing protein n=2 Tax... [more]
A0A7S2W6R2_9STRA3.510e-4134.83Hypothetical protein n=1 Tax=Rhizochromulina marin... [more]
A0A7S2G351_9STRA5.710e-3438.12Hypothetical protein n=1 Tax=Florenciella parvula ... [more]
A0A7S2UAL2_9STRA5.370e-2931.72Hypothetical protein n=1 Tax=Attheya septentrional... [more]
A0A1Z5KGC0_FISSO1.090e-2829.64SAGA-associated factor 29 n=2 Tax=Fistulifera sola... [more]
B7G1U2_PHATC1.780e-2630.07Predicted protein n=1 Tax=Phaeodactylum tricornutu... [more]
A0A6V2GR38_9STRA3.120e-2535.03Hypothetical protein n=2 Tax=Ditylum brightwellii ... [more]
A0A7S4A4V8_9STRA4.570e-2530.16Hypothetical protein n=1 Tax=Pelagomonas calceolat... [more]
A0A4D9CMQ3_9STRA1.620e-2430.45SGF29 C-terminal domain-containing protein n=3 Tax... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 25..45
NoneNo IPR availableGENE3D2.30.30.140coord: 220..291
e-value: 3.1E-17
score: 64.3
NoneNo IPR availableGENE3D6.10.140.1740coord: 2..127
e-value: 8.7E-18
score: 66.6
NoneNo IPR availablePANTHERPTHR21539:SF0SAGA-ASSOCIATED FACTOR 29coord: 145..290
IPR024610Inhibitor of growth protein, N-terminal histone-bindingSMARTSM01408ING_2coord: 3..129
e-value: 4.7E-15
score: 66.0
IPR024610Inhibitor of growth protein, N-terminal histone-bindingPFAMPF12998INGcoord: 4..128
e-value: 1.7E-14
score: 54.2
IPR010750SGF29 tudor-like domainPFAMPF07039DUF1325coord: 167..283
e-value: 6.1E-20
score: 71.6
IPR010750SGF29 tudor-like domainPROSITEPS51518SGF29_Ccoord: 161..291
score: 32.383423
IPR037802SAGA-associated factor 29PANTHERPTHR21539UNCHARACTERIZEDcoord: 145..290

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Contig_129contigContig_129:158206..161249 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Tribonema minus UTEX_B_31562021-06-17
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
jgi.p|Trimin1|352706mRNA_9834Tribonema minus UTEX_B_3156 mRNAContig_129 158206..161297 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Trimin1|352706|estExt_Genemark1.C_Ctg_1290017 ID=Trimin1|352706|estExt_Genemark1.C_Ctg_1290017|Name=jgi.p|Trimin1|352706|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=292bp
MAHIEDFLDAISTIPNEVKRSLYLIRSLDKSNKDGSAELAEAERNFISVS
LLLDEKGTREAKRKLRERTDRDRDVEPAKLVEDPVALADIAAKRAKCQQI
ADEKVAIADQMHDYVAAHLRRLTRDLAVMDEMLETSGLRTGTAAAASLGG
SGGSGSGSRFDEPIAMKGEEVAVKPERHEDLWVLGRVKEYDANSGLYLVM
DEDDNSKDYKVDEVDVVVLGSGTKLSKGESVMAVYPDTTSFYKAVISVPP
RRGSQIHSTTASVQFEDDADDSGMTPHRVILTKHIMPLPNT*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR024610ING_N_histone-binding
IPR010750SGF29_tudor-like_dom
IPR037802SGF29