Trimin1|352684|estExt_Genemark1.C_Ctg_1280022 (polypeptide) Tribonema minus UTEX_B_3156

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
Namejgi.p|Trimin1|352684
Unique NameTrimin1|352684|estExt_Genemark1.C_Ctg_1280022
Typepolypeptide
OrganismTribonema minus UTEX_B_3156 (Tribonema minus UTEX_B_3156 )
Sequence length271
Homology
BLAST of jgi.p|Trimin1|352684 vs. uniprot
Match: A0A835ZA29_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZA29_9STRA)

HSP 1 Score: 519 bits (1337), Expect = 7.510e-186
Identity = 270/270 (100.00%), Postives = 270/270 (100.00%), Query Frame = 0
Query:    1 MDCPEPVNEPLEGQDQVERAMEFGLDVIQQALLEREDTEAFSWFFVHYVKMVGGHYPSMFRSLMQRASRAPTEASFQGAWKGLLDALLDAGASDDDVMKYLNDTIYPIRERWAFCYRLGVLTLGINSTQRCEGYFGILKAELLKVTTLCHLKQTLENITASTTLVEWAVLNKLQPELALRTCIRYGNLDSFRWLFSQFDLPLRDDYCWRAARGGHLKLLQLLRQNGFPWSEYXXXXXXXXXXXXXXXWLVRTVGSCERVSLERGYVRIRR 270
            MDCPEPVNEPLEGQDQVERAMEFGLDVIQQALLEREDTEAFSWFFVHYVKMVGGHYPSMFRSLMQRASRAPTEASFQGAWKGLLDALLDAGASDDDVMKYLNDTIYPIRERWAFCYRLGVLTLGINSTQRCEGYFGILKAELLKVTTLCHLKQTLENITASTTLVEWAVLNKLQPELALRTCIRYGNLDSFRWLFSQFDLPLRDDYCWRAARGGHLKLLQLLRQNGFPWSEYXXXXXXXXXXXXXXXWLVRTVGSCERVSLERGYVRIRR
Sbjct:    1 MDCPEPVNEPLEGQDQVERAMEFGLDVIQQALLEREDTEAFSWFFVHYVKMVGGHYPSMFRSLMQRASRAPTEASFQGAWKGLLDALLDAGASDDDVMKYLNDTIYPIRERWAFCYRLGVLTLGINSTQRCEGYFGILKAELLKVTTLCHLKQTLENITASTTLVEWAVLNKLQPELALRTCIRYGNLDSFRWLFSQFDLPLRDDYCWRAARGGHLKLLQLLRQNGFPWSEYXXXXXXXXXXXXXXXWLVRTVGSCERVSLERGYVRIRR 270          
BLAST of jgi.p|Trimin1|352684 vs. uniprot
Match: A0A835ZD50_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZD50_9STRA)

HSP 1 Score: 296 bits (759), Expect = 3.690e-98
Identity = 146/147 (99.32%), Postives = 147/147 (100.00%), Query Frame = 0
Query:   14 QDQVERAMEFGLDVIQQALLEREDTEAFSWFFVHYVKMVGGHYPSMFRSLMQRASRAPTEASFQGAWKGLLDALLDAGASDDDVMKYLNDTIYPIRERWAFCYRLGVLTLGINSTQRCEGYFGILKAELLKVTTLCHLKQTLENITA 160
            QDQVERAMEFGLDVIQQALLEREDTEAFSWFFVHYVKMVGGHYPSMFRSLMQRASRAPTEASFQGAWKGLLDAL+DAGASDDDVMKYLNDTIYPIRERWAFCYRLGVLTLGINSTQRCEGYFGILKAELLKVTTLCHLKQTLENITA
Sbjct:  104 QDQVERAMEFGLDVIQQALLEREDTEAFSWFFVHYVKMVGGHYPSMFRSLMQRASRAPTEASFQGAWKGLLDALVDAGASDDDVMKYLNDTIYPIRERWAFCYRLGVLTLGINSTQRCEGYFGILKAELLKVTTLCHLKQTLENITA 250          
BLAST of jgi.p|Trimin1|352684 vs. uniprot
Match: A0A835Z0Q7_9STRA (SWIM-type domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z0Q7_9STRA)

HSP 1 Score: 275 bits (702), Expect = 1.960e-84
Identity = 143/177 (80.79%), Postives = 145/177 (81.92%), Query Frame = 0
Query:   14 QDQVERAMEFGLDVIQQ------------------------------ALLEREDTEAFSWFFVHYVKMVGGHYPSMFRSLMQRASRAPTEASFQGAWKGLLDALLDAGASDDDVMKYLNDTIYPIRERWAFCYRLGVLTLGINSTQRCEGYFGILKAELLKVTTLCHLKQTLENITA 160
            QDQVERAMEFGLDVIQQ                              ALLEREDTEAFSWFFVHYVKMVGGHYPSMFRSLMQRA RAPTEASFQGAWKGLLDAL+DAGASDDDVMKYLNDTIYPIRERWAFCYRLGVLTLGINSTQRCEGYFGILKAELLKVTT C+LKQTLENITA
Sbjct:   84 QDQVERAMEFGLDVIQQDCTFGTNKYGLALSIIVGVNGDSKTRMFCQALLEREDTEAFSWFFVHYVKMVGGHYPSMFRSLMQRALRAPTEASFQGAWKGLLDALVDAGASDDDVMKYLNDTIYPIRERWAFCYRLGVLTLGINSTQRCEGYFGILKAELLKVTTFCYLKQTLENITA 260          
BLAST of jgi.p|Trimin1|352684 vs. uniprot
Match: A0A836CA74_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CA74_9STRA)

HSP 1 Score: 279 bits (714), Expect = 8.350e-84
Identity = 145/177 (81.92%), Postives = 147/177 (83.05%), Query Frame = 0
Query:   14 QDQVERAMEFGLDVIQQ------------------------------ALLEREDTEAFSWFFVHYVKMVGGHYPSMFRSLMQRASRAPTEASFQGAWKGLLDALLDAGASDDDVMKYLNDTIYPIRERWAFCYRLGVLTLGINSTQRCEGYFGILKAELLKVTTLCHLKQTLENITA 160
            QDQVERAMEFGLDVIQQ                              ALLEREDTEAFSWFFVHYVKMVGGHYPSMFRSLMQRASRAPTEASFQGAWKGLLDAL+DAGASDDDVMKYLNDTIYPIRERWAFCYRLGVLTLGINST+RCEGYFGILKAELLKVTTLCHLKQTLENITA
Sbjct:  209 QDQVERAMEFGLDVIQQDCTFGTNKYGLALSIIVGVNGDSKTRMFCQALLEREDTEAFSWFFVHYVKMVGGHYPSMFRSLMQRASRAPTEASFQGAWKGLLDALVDAGASDDDVMKYLNDTIYPIRERWAFCYRLGVLTLGINSTRRCEGYFGILKAELLKVTTLCHLKQTLENITA 385          
BLAST of jgi.p|Trimin1|352684 vs. uniprot
Match: A0A835Z7W2_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z7W2_9STRA)

HSP 1 Score: 257 bits (656), Expect = 6.870e-75
Identity = 144/220 (65.45%), Postives = 146/220 (66.36%), Query Frame = 0
Query:   14 QDQVERAMEFGLDVIQQ------------------------------ALLEREDTEAFSWFFVHYVKMVGGHYP-------------------------------------------SMFRSLMQRASRAPTEASFQGAWKGLLDALLDAGASDDDVMKYLNDTIYPIRERWAFCYRLGVLTLGINSTQRCEGYFGILKAELLKVTTLCHLKQTLENITA 160
            QDQVERAMEFGLDVIQQ                              ALLEREDTEAFSWFFVHYVKMVGGHYP                                            MFRSLMQRASRAPTEASFQGAWKGLLDAL+DAGASDDDVMKYLNDTIYPIRERWAFCYRLGVLTLGINST+RCEGYFGILKAELLKVTTLCHLKQTLENITA
Sbjct:  261 QDQVERAMEFGLDVIQQDCTLGTNKYGLALSIIVGVNGDSKTRMFCQALLEREDTEAFSWFFVHYVKMVGGHYPFVCFTDRLSSQAIGVKAQACERNQQCKYAGYKLYQEARHIAAQEMFRSLMQRASRAPTEASFQGAWKGLLDALVDAGASDDDVMKYLNDTIYPIRERWAFCYRLGVLTLGINSTRRCEGYFGILKAELLKVTTLCHLKQTLENITA 480          
BLAST of jgi.p|Trimin1|352684 vs. uniprot
Match: A0A835ZEP9_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZEP9_9STRA)

HSP 1 Score: 207 bits (527), Expect = 5.590e-64
Identity = 102/102 (100.00%), Postives = 102/102 (100.00%), Query Frame = 0
Query:   59 MFRSLMQRASRAPTEASFQGAWKGLLDALLDAGASDDDVMKYLNDTIYPIRERWAFCYRLGVLTLGINSTQRCEGYFGILKAELLKVTTLCHLKQTLENITA 160
            MFRSLMQRASRAPTEASFQGAWKGLLDALLDAGASDDDVMKYLNDTIYPIRERWAFCYRLGVLTLGINSTQRCEGYFGILKAELLKVTTLCHLKQTLENITA
Sbjct:    1 MFRSLMQRASRAPTEASFQGAWKGLLDALLDAGASDDDVMKYLNDTIYPIRERWAFCYRLGVLTLGINSTQRCEGYFGILKAELLKVTTLCHLKQTLENITA 102          
BLAST of jgi.p|Trimin1|352684 vs. uniprot
Match: A0A835Z031_9STRA (Uncharacterized protein n=2 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z031_9STRA)

HSP 1 Score: 201 bits (510), Expect = 2.080e-61
Identity = 100/102 (98.04%), Postives = 101/102 (99.02%), Query Frame = 0
Query:   59 MFRSLMQRASRAPTEASFQGAWKGLLDALLDAGASDDDVMKYLNDTIYPIRERWAFCYRLGVLTLGINSTQRCEGYFGILKAELLKVTTLCHLKQTLENITA 160
            MFRSLMQRASRAPTEASFQGA KGLLDAL+DAGASDDDVMKYLNDTIYPIRERWAFCYRLGVLTLGINSTQRCEGYFGILKAELLKVTTLCHLKQTLENITA
Sbjct:    1 MFRSLMQRASRAPTEASFQGARKGLLDALVDAGASDDDVMKYLNDTIYPIRERWAFCYRLGVLTLGINSTQRCEGYFGILKAELLKVTTLCHLKQTLENITA 102          
BLAST of jgi.p|Trimin1|352684 vs. uniprot
Match: A0A835ZIG4_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZIG4_9STRA)

HSP 1 Score: 146 bits (368), Expect = 1.120e-39
Identity = 81/146 (55.48%), Postives = 97/146 (66.44%), Query Frame = 0
Query:   14 QDQVERAMEFGLDVIQQALLEREDTEAFSWFFVHYVKMVGGHYPSMFRSLMQRASRAPTEASFQGAWKGLLDALLDAGASDDDVMKYLNDTIYPIRERWAFCYRLGVLTLGINSTQRCEGYFGILKAELLKVTTLCHLKQTLENIT 159
            QDQVERA EFGLDVI Q            W   H++K V G    +  SL       PTE  F  AW  L DAL  AGA+D +V+ YL++TIYPIR RWAFC+R+G+LTLGINSTQRCEGYFG++KAEL+K+ TL HL +TL  IT
Sbjct:   26 QDQVERANEFGLDVIMQ------------W---HFMKNVKG---KLLSSLGAAWEATPTEECFDAAWDALGDALGSAGAADAEVLGYLDNTIYPIRRRWAFCFRIGILTLGINSTQRCEGYFGLIKAELVKLGTLTHLLETLARIT 153          
BLAST of jgi.p|Trimin1|352684 vs. uniprot
Match: A0A835ZDE2_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZDE2_9STRA)

HSP 1 Score: 146 bits (368), Expect = 6.430e-38
Identity = 80/146 (54.79%), Postives = 95/146 (65.07%), Query Frame = 0
Query:   14 QDQVERAMEFGLDVIQQALLEREDTEAFSWFFVHYVKMVGGHYPSMFRSLMQRASRAPTEASFQGAWKGLLDALLDAGASDDDVMKYLNDTIYPIRERWAFCYRLGVLTLGINSTQRCEGYFGILKAELLKVTTLCHLKQTLENIT 159
            QDQVERA EFGLDVI Q              F H+               + RASRAPTE  F  AW  L DAL  AGA+D +V+ YL++TIYPIR RWAFC+R+G+L LGINSTQRCEGYFG++KAEL+K+ TL HL +TL  IT
Sbjct:  200 QDQVERANEFGLDVIMQT-------------FKHH---------------LHRASRAPTEECFDAAWDALGDALGSAGAADAEVLGYLDNTIYPIRRRWAFCFRIGILILGINSTQRCEGYFGLIKAELVKLGTLTHLLETLARIT 317          
BLAST of jgi.p|Trimin1|352684 vs. uniprot
Match: A0A836CNV1_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CNV1_9STRA)

HSP 1 Score: 147 bits (370), Expect = 3.370e-37
Identity = 80/145 (55.17%), Postives = 95/145 (65.52%), Query Frame = 0
Query:   15 DQVERAMEFGLDVIQQALLEREDTEAFSWFFVHYVKMVGGHYPSMFRSLMQRASRAPTEASFQGAWKGLLDALLDAGASDDDVMKYLNDTIYPIRERWAFCYRLGVLTLGINSTQRCEGYFGILKAELLKVTTLCHLKQTLENIT 159
            DQVERA EFGLDVI Q              F H+               + RASRAPTE  F  AW  L DAL  AGA+D +V+ YL++TIYPIR RWAFC+R+G+LTLGINSTQRCEGYFG++KAEL+K+ TL HL +TL  IT
Sbjct:  339 DQVERANEFGLDVIMQT-------------FKHH---------------LHRASRAPTEECFDAAWDALGDALGSAGAADAEVLGYLDNTIYPIRRRWAFCFRIGILTLGINSTQRCEGYFGLIKAELVKLGTLTHLLETLARIT 455          
The following BLAST results are available for this feature:
BLAST of jgi.p|Trimin1|352684 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 15
Match NameE-valueIdentityDescription
A0A835ZA29_9STRA7.510e-186100.00Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A835ZD50_9STRA3.690e-9899.32Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A835Z0Q7_9STRA1.960e-8480.79SWIM-type domain-containing protein n=1 Tax=Tribon... [more]
A0A836CA74_9STRA8.350e-8481.92Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A835Z7W2_9STRA6.870e-7565.45Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A835ZEP9_9STRA5.590e-64100.00Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A835Z031_9STRA2.080e-6198.04Uncharacterized protein n=2 Tax=Tribonema minus Ta... [more]
A0A835ZIG4_9STRA1.120e-3955.48Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A835ZDE2_9STRA6.430e-3854.79Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A836CNV1_9STRA3.370e-3755.17Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableSUPERFAMILY140860Pseudo ankyrin repeat-likecoord: 161..235

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Contig_128contigContig_128:206152..218210 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Tribonema minus UTEX_B_31562021-06-17
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
jgi.p|Trimin1|352684mRNA_15299Tribonema minus UTEX_B_3156 mRNAContig_128 206152..218210 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Trimin1|352684|estExt_Genemark1.C_Ctg_1280022 ID=Trimin1|352684|estExt_Genemark1.C_Ctg_1280022|Name=jgi.p|Trimin1|352684|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=271bp
MDCPEPVNEPLEGQDQVERAMEFGLDVIQQALLEREDTEAFSWFFVHYVK
MVGGHYPSMFRSLMQRASRAPTEASFQGAWKGLLDALLDAGASDDDVMKY
LNDTIYPIRERWAFCYRLGVLTLGINSTQRCEGYFGILKAELLKVTTLCH
LKQTLENITASTTLVEWAVLNKLQPELALRTCIRYGNLDSFRWLFSQFDL
PLRDDYCWRAARGGHLKLLQLLRQNGFPWSEYTCTEAAKGGHIAVLQWLV
RTVGSCERVSLERGYVRIRR*
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