Trimin1|352678|estExt_Genemark1.C_Ctg_1280014 (polypeptide) Tribonema minus UTEX_B_3156

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
Namejgi.p|Trimin1|352678
Unique NameTrimin1|352678|estExt_Genemark1.C_Ctg_1280014
Typepolypeptide
OrganismTribonema minus UTEX_B_3156 (Tribonema minus UTEX_B_3156 )
Sequence length207
Homology
BLAST of jgi.p|Trimin1|352678 vs. uniprot
Match: A0A836CP60_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CP60_9STRA)

HSP 1 Score: 219 bits (559), Expect = 1.750e-69
Identity = 109/109 (100.00%), Postives = 109/109 (100.00%), Query Frame = 0
Query:    1 MAEQAAPSKWALRKEARSAMYSMSTDAVAPVRKTARRRLNDPDPNALCQKCLNKGHWTYQCNSNAPVYKVRPSSTALMLEGKRTFDLALPPDEAERRAHKEQQQRAANG 109
            MAEQAAPSKWALRKEARSAMYSMSTDAVAPVRKTARRRLNDPDPNALCQKCLNKGHWTYQCNSNAPVYKVRPSSTALMLEGKRTFDLALPPDEAERRAHKEQQQRAANG
Sbjct:    1 MAEQAAPSKWALRKEARSAMYSMSTDAVAPVRKTARRRLNDPDPNALCQKCLNKGHWTYQCNSNAPVYKVRPSSTALMLEGKRTFDLALPPDEAERRAHKEQQQRAANG 109          
BLAST of jgi.p|Trimin1|352678 vs. uniprot
Match: A0A2D4CDS5_PYTIN (Uncharacterized protein n=2 Tax=Pythium insidiosum TaxID=114742 RepID=A0A2D4CDS5_PYTIN)

HSP 1 Score: 75.9 bits (185), Expect = 5.370e-14
Identity = 48/105 (45.71%), Postives = 62/105 (59.05%), Query Frame = 0
Query:    3 EQAAPSKWALRKEARSAMYSMSTDAVAPVRKTARRRLND-PDPNALCQKCLNKGHWTYQCNSNAPVYKVRPSSTALMLEGK--RTFDLALPPDEAERRAHKEQQQ 104
            ++AAPSKWA RKEA+  MY  STD V   R++   R +     NA CQKCL  GHWTY+C  N PVY  R S TA + + K  + F+   PP+  E    KEQ++
Sbjct:    6 DEAAPSKWAQRKEAKRNMYLTSTDQVLVQRRSGLGRSSSHAAANARCQKCLRDGHWTYECK-NEPVYVARASRTAQLKKPKLRQPFNADKPPEMVE----KEQEE 105          
BLAST of jgi.p|Trimin1|352678 vs. uniprot
Match: A0A8K1FDP8_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1FDP8_PYTOL)

HSP 1 Score: 68.2 bits (165), Expect = 1.130e-10
Identity = 42/95 (44.21%), Postives = 53/95 (55.79%), Query Frame = 0
Query:    3 EQAAPSKWALRKEARSAMYSMSTDAVAPVRKTARRRLNDPDPNALCQKCLNKGHWTYQCNSNAPVYKVRPSSTALMLEGK--RTFDLALPPDEAE 95
            E AAPS WA+RKEA+  MY  STD V   R+            A CQKCL  GHWTY+C ++A VY  R S T+ +   K  + F+   PP+ AE
Sbjct:    6 EDAAPSAWAMRKEAKRNMYLTSTDHVRVQRRGLGGSSGGSAAAAQCQKCLQAGHWTYECKNDA-VYVKRASRTSQLKNPKLRQPFNQDKPPETAE 99          
BLAST of jgi.p|Trimin1|352678 vs. uniprot
Match: D0P073_PHYIT (Uncharacterized protein n=2 Tax=Phytophthora infestans TaxID=4787 RepID=D0P073_PHYIT)

HSP 1 Score: 65.9 bits (159), Expect = 7.320e-10
Identity = 39/88 (44.32%), Postives = 51/88 (57.95%), Query Frame = 0
Query:   10 WALRKEARSAMYSMSTDAVAPVRKTARRRLNDPDPN---ALCQKCLNKGHWTYQCNSNAPVYKVRPSSTALMLEGK--RTFDLALPPD 92
            WALRKEAR  MY  STD V    +  RR L     +   A+CQKCL +GHWTY+C + A VY  RPS +  +   K  + F+  +PP+
Sbjct:   13 WALRKEARRHMYETSTDQV----RVHRRGLGSSSSSSVAAMCQKCLRRGHWTYECKNGA-VYVQRPSRSQQLRNPKLRQPFNKEMPPE 95          
BLAST of jgi.p|Trimin1|352678 vs. uniprot
Match: A0A6H5KZ87_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KZ87_9PHAE)

HSP 1 Score: 64.7 bits (156), Expect = 1.060e-9
Identity = 39/93 (41.94%), Postives = 50/93 (53.76%), Query Frame = 0
Query:    1 MAEQAAPSKWALRKEARSAMYSMSTDAVAPVRKTARRRLNDPDPNALCQKCLNKGHWTYQCNSNAPVYKVRPSSTALMLEG--KRTFDLALPP 91
            M + A  S+WA RK+ R  MY+ S+DA+  V     R+      N +CQKCL  GHWTY+C   A  YK R S T ++     K  F L LPP
Sbjct:    1 MGDAAPVSRWAQRKQQREMMYATSSDAIQGVF----RKKQKAAKNMVCQKCLQVGHWTYECKGKA-TYKARVSRTEILENPDLKPKFHLDLPP 88          
BLAST of jgi.p|Trimin1|352678 vs. uniprot
Match: A0A0P1AIB6_PLAHL (Multidrug oligosaccharidyl-lipid polysaccharide flippase superfamily n=1 Tax=Plasmopara halstedii TaxID=4781 RepID=A0A0P1AIB6_PLAHL)

HSP 1 Score: 66.2 bits (160), Expect = 3.610e-9
Identity = 39/86 (45.35%), Postives = 50/86 (58.14%), Query Frame = 0
Query:    9 KWALRKEARSAMYSMSTDAVAPVRKTARRRLNDPDPNALCQKCLNKGHWTYQCNSNAPVYKVRPSSTALMLEGK--RTFDLALPPD 92
            KWA RKEAR  MY+ STD V  V +      + P+  ALCQKCL  GHWTY+C + A VY  RPS +  +   K  + F+   PP+
Sbjct:  522 KWAQRKEARRNMYATSTDQVR-VHRRGLGASSSPNVAALCQKCLQPGHWTYECKNEA-VYVQRPSRSQQLRNPKLRQPFNQDKPPE 605          
BLAST of jgi.p|Trimin1|352678 vs. uniprot
Match: A0A7I8KKQ7_SPIIN (Hypothetical protein n=2 Tax=Spirodela intermedia TaxID=51605 RepID=A0A7I8KKQ7_SPIIN)

HSP 1 Score: 57.8 bits (138), Expect = 1.520e-6
Identity = 33/74 (44.59%), Postives = 43/74 (58.11%), Query Frame = 0
Query:    7 PSKWALRKEARSAMYSMSTDAVAPVRKTARRRLNDPDPN-----ALCQKCLNKGHWTYQCNSNAPVYKVRPSST 75
            PS+W  RKEA+  MY MST+    + +  R+ L  P  +     A CQ+CL  GHWTY+C + A VY  RPS T
Sbjct:   52 PSRWQERKEAKRQMYLMSTEKAVTLGE--RKDLKAPSSSSGGVAAQCQRCLQPGHWTYECKNEA-VYISRPSRT 122          
BLAST of jgi.p|Trimin1|352678 vs. uniprot
Match: A0A2P4PTD7_RHIID (Zinc knuckle-domain-containing protein n=2 Tax=Rhizophagus irregularis TaxID=588596 RepID=A0A2P4PTD7_RHIID)

HSP 1 Score: 55.5 bits (132), Expect = 1.710e-6
Identity = 23/51 (45.10%), Postives = 29/51 (56.86%), Query Frame = 0
Query:   42 PDPNALCQKCLNKGHWTYQCNSNAPVYKVRPSSTALMLEGKRTFDLALPPD 92
            P  N  CQKCL  GHWTY+C  N P YK RP+ T  + +  +   L LP +
Sbjct:   18 PSANTKCQKCLETGHWTYECK-NTPTYKARPTRTQQLTKPLKPISLELPDE 67          
BLAST of jgi.p|Trimin1|352678 vs. uniprot
Match: A0A1D1XVD3_9ARAE (Zinc finger CCHC domain-containing protein 10 n=2 Tax=Anthurium amnicola TaxID=1678845 RepID=A0A1D1XVD3_9ARAE)

HSP 1 Score: 57.4 bits (137), Expect = 2.110e-6
Identity = 32/71 (45.07%), Postives = 41/71 (57.75%), Query Frame = 0
Query:    7 PSKWALRKEARSAMYSMSTDAVAPV--RKTARRRLNDPDPNALCQKCLNKGHWTYQCNSNAPVYKVRPSST 75
            PS+W  RKEA+  MY MST+    +  RK  +   +     A CQ+CL  GHWTY+C + A VY  RPS T
Sbjct:   52 PSRWQERKEAKRQMYLMSTEKAVTLGERKDLKVSSSAGGVAAQCQRCLQAGHWTYECKNEA-VYISRPSRT 121          
BLAST of jgi.p|Trimin1|352678 vs. uniprot
Match: A0A015MX93_RHIIW (Uncharacterized protein n=8 Tax=Rhizophagus TaxID=1129544 RepID=A0A015MX93_RHIIW)

HSP 1 Score: 55.5 bits (132), Expect = 4.940e-6
Identity = 23/51 (45.10%), Postives = 29/51 (56.86%), Query Frame = 0
Query:   42 PDPNALCQKCLNKGHWTYQCNSNAPVYKVRPSSTALMLEGKRTFDLALPPD 92
            P  N  CQKCL  GHWTY+C  N P YK RP+ T  + +  +   L LP +
Sbjct:   18 PSANTKCQKCLETGHWTYECK-NTPTYKARPTRTQQLTKPLKPISLELPDE 67          
The following BLAST results are available for this feature:
BLAST of jgi.p|Trimin1|352678 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 18
Match NameE-valueIdentityDescription
A0A836CP60_9STRA1.750e-69100.00Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A2D4CDS5_PYTIN5.370e-1445.71Uncharacterized protein n=2 Tax=Pythium insidiosum... [more]
A0A8K1FDP8_PYTOL1.130e-1044.21Uncharacterized protein n=1 Tax=Pythium oligandrum... [more]
D0P073_PHYIT7.320e-1044.32Uncharacterized protein n=2 Tax=Phytophthora infes... [more]
A0A6H5KZ87_9PHAE1.060e-941.94Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A0P1AIB6_PLAHL3.610e-945.35Multidrug oligosaccharidyl-lipid polysaccharide fl... [more]
A0A7I8KKQ7_SPIIN1.520e-644.59Hypothetical protein n=2 Tax=Spirodela intermedia ... [more]
A0A2P4PTD7_RHIID1.710e-645.10Zinc knuckle-domain-containing protein n=2 Tax=Rhi... [more]
A0A1D1XVD3_9ARAE2.110e-645.07Zinc finger CCHC domain-containing protein 10 n=2 ... [more]
A0A015MX93_RHIIW4.940e-645.10Uncharacterized protein n=8 Tax=Rhizophagus TaxID=... [more]

Pages

back to top
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePFAMPF13917zf-CCHC_3coord: 45..77
e-value: 4.0E-14
score: 52.3
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 80..206
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 86..108
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 21..43
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 120..206

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Contig_128contigContig_128:112857..114659 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Tribonema minus UTEX_B_31562021-06-17
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
jgi.p|Trimin1|352678mRNA_15293Tribonema minus UTEX_B_3156 mRNAContig_128 112281..114709 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Trimin1|352678|estExt_Genemark1.C_Ctg_1280014 ID=Trimin1|352678|estExt_Genemark1.C_Ctg_1280014|Name=jgi.p|Trimin1|352678|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=207bp
MAEQAAPSKWALRKEARSAMYSMSTDAVAPVRKTARRRLNDPDPNALCQK
CLNKGHWTYQCNSNAPVYKVRPSSTALMLEGKRTFDLALPPDEAERRAHK
EQQQRAANGKDKKKRKRPSSSSSSSSSSSSSSSSSSSSGSESGSESDSSS
SSSSSSSSSSSSSSSSSSGSSSSSSSSSSSSSGSSSSSSSSSSSSSSGSS
SSSSRK*
back to top