Trimin1|352677|estExt_Genemark1.C_Ctg_1280013 (polypeptide) Tribonema minus UTEX_B_3156

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
Namejgi.p|Trimin1|352677
Unique NameTrimin1|352677|estExt_Genemark1.C_Ctg_1280013
Typepolypeptide
OrganismTribonema minus UTEX_B_3156 (Tribonema minus UTEX_B_3156 )
Sequence length537
Homology
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BLAST of jgi.p|Trimin1|352677 vs. uniprot
Match: A0A836CL35_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CL35_9STRA)

HSP 1 Score: 1070 bits (2767), Expect = 0.000e+0
Identity = 536/536 (100.00%), Postives = 536/536 (100.00%), Query Frame = 0 
Query:    1 MSSSTGRHPRLEGSMLEDDGLMMRVLEYLEDWAHTRVSKDFRRTYLQIHHPSEDALAMAVDLGTMQCVADFLDARQSGPGSSVHGTPSPGLLAHAVHHAKRDIACLLKERGADEHHVLVAIAAASVGDVAALRDAVPIMPPRDAFHTKSLDYIASAALASPRPIDTMAAVIECGFPVHVPQTAGVAALDAHNMDAYRAVLMTRTPGVEHPVDTVQAAVARGFQLRSALCSMAFAVGSGSLPLCEWLAQHTRMTKFPKGCVPGSGLVEKSAMCSGAMFACIADAADAAGVSWSCSEALERALRTKNFAVAKQLVRWRNMSPAMWTVAMQTGDTSVLSFLHELDPMPAHVAQEALCRYCASFVLSHEATMLWLVAHGGTLNEHMILSLREGAAESAMRRRNGPRNAAHLTHAALPDWLAAIVVRCIGATQVSEEDRIAAARHACKTNDMGLLALCGEVTFTGEESADDRRIATLATQDGPHMLLIPATRKTHADAANRNISARMPELSAEYPGWDGLYTAHYRRWYAATVEGGGNSGL 536
            MSSSTGRHPRLEGSMLEDDGLMMRVLEYLEDWAHTRVSKDFRRTYLQIHHPSEDALAMAVDLGTMQCVADFLDARQSGPGSSVHGTPSPGLLAHAVHHAKRDIACLLKERGADEHHVLVAIAAASVGDVAALRDAVPIMPPRDAFHTKSLDYIASAALASPRPIDTMAAVIECGFPVHVPQTAGVAALDAHNMDAYRAVLMTRTPGVEHPVDTVQAAVARGFQLRSALCSMAFAVGSGSLPLCEWLAQHTRMTKFPKGCVPGSGLVEKSAMCSGAMFACIADAADAAGVSWSCSEALERALRTKNFAVAKQLVRWRNMSPAMWTVAMQTGDTSVLSFLHELDPMPAHVAQEALCRYCASFVLSHEATMLWLVAHGGTLNEHMILSLREGAAESAMRRRNGPRNAAHLTHAALPDWLAAIVVRCIGATQVSEEDRIAAARHACKTNDMGLLALCGEVTFTGEESADDRRIATLATQDGPHMLLIPATRKTHADAANRNISARMPELSAEYPGWDGLYTAHYRRWYAATVEGGGNSGL
Sbjct:    1 MSSSTGRHPRLEGSMLEDDGLMMRVLEYLEDWAHTRVSKDFRRTYLQIHHPSEDALAMAVDLGTMQCVADFLDARQSGPGSSVHGTPSPGLLAHAVHHAKRDIACLLKERGADEHHVLVAIAAASVGDVAALRDAVPIMPPRDAFHTKSLDYIASAALASPRPIDTMAAVIECGFPVHVPQTAGVAALDAHNMDAYRAVLMTRTPGVEHPVDTVQAAVARGFQLRSALCSMAFAVGSGSLPLCEWLAQHTRMTKFPKGCVPGSGLVEKSAMCSGAMFACIADAADAAGVSWSCSEALERALRTKNFAVAKQLVRWRNMSPAMWTVAMQTGDTSVLSFLHELDPMPAHVAQEALCRYCASFVLSHEATMLWLVAHGGTLNEHMILSLREGAAESAMRRRNGPRNAAHLTHAALPDWLAAIVVRCIGATQVSEEDRIAAARHACKTNDMGLLALCGEVTFTGEESADDRRIATLATQDGPHMLLIPATRKTHADAANRNISARMPELSAEYPGWDGLYTAHYRRWYAATVEGGGNSGL 536
The following BLAST results are available for this feature:
BLAST of jgi.p|Trimin1|352677 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A836CL35_9STRA0.000e+0100.00Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Contig_128contigContig_128:105595..108186 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Tribonema minus UTEX_B_31562021-06-17
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
jgi.p|Trimin1|352677mRNA_15292Tribonema minus UTEX_B_3156 mRNAContig_128 105595..108186 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Trimin1|352677|estExt_Genemark1.C_Ctg_1280013 ID=Trimin1|352677|estExt_Genemark1.C_Ctg_1280013|Name=jgi.p|Trimin1|352677|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=537bp
MSSSTGRHPRLEGSMLEDDGLMMRVLEYLEDWAHTRVSKDFRRTYLQIHH
PSEDALAMAVDLGTMQCVADFLDARQSGPGSSVHGTPSPGLLAHAVHHAK
RDIACLLKERGADEHHVLVAIAAASVGDVAALRDAVPIMPPRDAFHTKSL
DYIASAALASPRPIDTMAAVIECGFPVHVPQTAGVAALDAHNMDAYRAVL
MTRTPGVEHPVDTVQAAVARGFQLRSALCSMAFAVGSGSLPLCEWLAQHT
RMTKFPKGCVPGSGLVEKSAMCSGAMFACIADAADAAGVSWSCSEALERA
LRTKNFAVAKQLVRWRNMSPAMWTVAMQTGDTSVLSFLHELDPMPAHVAQ
EALCRYCASFVLSHEATMLWLVAHGGTLNEHMILSLREGAAESAMRRRNG
PRNAAHLTHAALPDWLAAIVVRCIGATQVSEEDRIAAARHACKTNDMGLL
ALCGEVTFTGEESADDRRIATLATQDGPHMLLIPATRKTHADAANRNISA
RMPELSAEYPGWDGLYTAHYRRWYAATVEGGGNSGL*
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