Trimin1|352665|estExt_Genemark1.C_Ctg_1270042 (polypeptide) Tribonema minus UTEX_B_3156

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
Namejgi.p|Trimin1|352665
Unique NameTrimin1|352665|estExt_Genemark1.C_Ctg_1270042
Typepolypeptide
OrganismTribonema minus UTEX_B_3156 (Tribonema minus UTEX_B_3156 )
Sequence length510
Homology
BLAST of jgi.p|Trimin1|352665 vs. uniprot
Match: A0A835ZKC7_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZKC7_9STRA)

HSP 1 Score: 723 bits (1865), Expect = 2.480e-258
Identity = 509/509 (100.00%), Postives = 509/509 (100.00%), Query Frame = 0
Query:    1 MSHATNFPAYVEIWSLSVAQMVGLQTTAAFGYRYFTKHKAVINLTGLLASVLTLFFSTWAITLWFTGLGSISCMAIQVVNGLCLSSSNALAFVHLFLKADASNKLNPRWPVWRTAAIMSIVANWIILVVVHALITTKEAPNPNLGGEARCKWTFEEYTFKLKCGTAAGXXXXXXXXXXXXXXXXXXXXXXXXXXAFSASTMRRHRVDRGGGEVAAPLAVLCWLVQLFNHLLCVSMFASLLLNNLRSLLLXXXXXXXXXXXXXXXXXXXHLCLPPYSPELXXXXXXXXXXXXXXXXXXXXLQSLRTARHPRGSFTNGTATGALTTTGVTNDSVKLYKALVTRAVVAMIVSSAYCVXXXXXXXXXXXXXXXXXSAVQXXXXXXXXXXXXXXXXXPSQLAPANNGAVRAPHTTLMTILAIIKYDIXXXXXXXXXXXXNPTSLIPVFPLAVLDNACTLESIYFAIDLSGSAGAQQRLSISQLEAALAMSGSVNLSGTDQAEGAPKSTIVSAQV 509
            MSHATNFPAYVEIWSLSVAQMVGLQTTAAFGYRYFTKHKAVINLTGLLASVLTLFFSTWAITLWFTGLGSISCMAIQVVNGLCLSSSNALAFVHLFLKADASNKLNPRWPVWRTAAIMSIVANWIILVVVHALITTKEAPNPNLGGEARCKWTFEEYTFKLKCGTAAGXXXXXXXXXXXXXXXXXXXXXXXXXXAFSASTMRRHRVDRGGGEVAAPLAVLCWLVQLFNHLLCVSMFASLLLNNLRSLLLXXXXXXXXXXXXXXXXXXXHLCLPPYSPELXXXXXXXXXXXXXXXXXXXXLQSLRTARHPRGSFTNGTATGALTTTGVTNDSVKLYKALVTRAVVAMIVSSAYCVXXXXXXXXXXXXXXXXXSAVQXXXXXXXXXXXXXXXXXPSQLAPANNGAVRAPHTTLMTILAIIKYDIXXXXXXXXXXXXNPTSLIPVFPLAVLDNACTLESIYFAIDLSGSAGAQQRLSISQLEAALAMSGSVNLSGTDQAEGAPKSTIVSAQV
Sbjct:    1 MSHATNFPAYVEIWSLSVAQMVGLQTTAAFGYRYFTKHKAVINLTGLLASVLTLFFSTWAITLWFTGLGSISCMAIQVVNGLCLSSSNALAFVHLFLKADASNKLNPRWPVWRTAAIMSIVANWIILVVVHALITTKEAPNPNLGGEARCKWTFEEYTFKLKCGTAAGXXXXXXXXXXXXXXXXXXXXXXXXXXAFSASTMRRHRVDRGGGEVAAPLAVLCWLVQLFNHLLCVSMFASLLLNNLRSLLLXXXXXXXXXXXXXXXXXXXHLCLPPYSPELXXXXXXXXXXXXXXXXXXXXLQSLRTARHPRGSFTNGTATGALTTTGVTNDSVKLYKALVTRAVVAMIVSSAYCVXXXXXXXXXXXXXXXXXSAVQXXXXXXXXXXXXXXXXXPSQLAPANNGAVRAPHTTLMTILAIIKYDIXXXXXXXXXXXXNPTSLIPVFPLAVLDNACTLESIYFAIDLSGSAGAQQRLSISQLEAALAMSGSVNLSGTDQAEGAPKSTIVSAQV 509          
BLAST of jgi.p|Trimin1|352665 vs. uniprot
Match: A0A835Z900_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z900_9STRA)

HSP 1 Score: 145 bits (366), Expect = 8.690e-36
Identity = 76/162 (46.91%), Postives = 100/162 (61.73%), Query Frame = 0
Query:    1 MSHATNFPAYVEIWSLSVAQMVGLQTTAAFGYRYFTKHKAVINLTGLLASVLTLFFSTWAITLWFTGLGSISCMAIQVVNGLCLSSSNALAFVHLFLKADASNKLNPRWPVWRTAAIMSIVANWIILVVVHALITTKEAPNPNLGGEARCKWTFEEYTFKLK 162
            M  +T F    E+++L+V  M+ LQTT AFG RY ++++A++NLTGLLAS L+LF++ WA+T+WF G+G +SC  IQVVNG+CLSSSNALA                                 ++LV VH L++   APN  LGGE RC WTFEE TFKLK
Sbjct:    1 MGTSTAFVPLFEVFALTVTLMIALQTTVAFGKRYLSRNRALLNLTGLLASFLSLFYTLWALTIWFCGIGGLSCTVIQVVNGMCLSSSNALA---------------------------------VVLVAVHTLLSGYAAPNTALGGEERCVWTFEEATFKLK 129          
BLAST of jgi.p|Trimin1|352665 vs. uniprot
Match: D7FXM9_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FXM9_ECTSI)

HSP 1 Score: 121 bits (304), Expect = 9.370e-28
Identity = 69/158 (43.67%), Postives = 97/158 (61.39%), Query Frame = 0
Query:    7 FPAYVEIWSLSVAQMVGLQTTAAFGYRYFTKHKAVINLTGLLASVLTLFFSTWAITLWFTGLGSI-SCMAIQVVNGLCLSSSNALAFVHLFLKADASNKLNPRW-PVWRTAAIMSIVANWIILVVVHALITTKEAPNPNLGGEARCKWTFEEYTFKLK 162
            F  + EI+S  V   V L T+  FG R + K  A +N+TGL AS++ + +S +A+  WF GLG +  C  +  VNG C+S+SNA  F+HLF+KADASN+ NP+W   +R   + +   NW+ L VVHAL+   E     L G  RCK+TFE  +F+LK
Sbjct:    6 FGLFFEIFSEGVVFTVALITSVCFGERCW-KRSAPLNITGLAASLIAVSYSVFALEYWFNGLGDLYDCATLAAVNGTCMSASNAFTFLHLFVKADASNQRNPKWRKFYRWVGVATTAFNWVTLAVVHALLQGTEIDG--LDGP-RCKFTFEMNSFRLK 159          
BLAST of jgi.p|Trimin1|352665 vs. uniprot
Match: A0A835Z0T7_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z0T7_9STRA)

HSP 1 Score: 107 bits (266), Expect = 2.990e-21
Identity = 58/153 (37.91%), Postives = 86/153 (56.21%), Query Frame = 0
Query:   10 YVEIWSLSVAQMVGLQTTAAFGYRYFTKHKAVINLTGLLASVLTLFFSTWAITLWFTGLGSISCMAIQVVNGLCLSSSNALAFVHLFLKADASNKLNPRWPVWRTAAIMSIVANWIILVVVHALITTKEAPNPNLGGEARCKWTFEEYTFKLK 162
            Y EI+ L++   +GLQ T  FG R+ T  + ++N TG LA+++   ++       F+G+G   C A+++  GL    SN  AF+HLFL+ADA N +NP+WP WR   I+  VANW+  + V  L   K +     G E RC + FEE +   K
Sbjct:   22 YFEIFCLAITFTIGLQVTFFFGERWLTMRRNMMNATGFLAAIIAAVYTLVKALHLFSGIGLSECNALRISLGLGQGLSNGFAFLHLFLRADAINAINPKWPPWRAVGIVLTVANWVCFLAVSFL--RKGSAIDQFGAE-RCVFYFEEISSNFK 171          
BLAST of jgi.p|Trimin1|352665 vs. uniprot
Match: A0A835ZCN3_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZCN3_9STRA)

HSP 1 Score: 100 bits (248), Expect = 1.530e-19
Identity = 50/134 (37.31%), Postives = 79/134 (58.96%), Query Frame = 0
Query:   11 VEIWSLSVAQMVGLQTTAAFGYRYFTKHKAVINLTGLLASVLTLFFSTWAITLWFTGLGSI-SCMAIQVVNGLCLSSSNALAFVHLFLKADASNKLNPRWPVWRTAAIMSIVANWIILVVVHALITTKEAPNPN 143
            +E+ +L +   + LQTT  FG+RYF+  +  +NL+  LAS L L ++ + +  WF G+G+  SC  + +V G+   + N++AF+HLFL+ADA N LN +W   R   ++ + ANW  L  V    T KE   P+
Sbjct:    5 LEVAALGMLLTISLQTTVFFGHRYFSYRRVWMNLSAFLASALGLIYAAYKLGYWFAGIGAFFSCRNVMMVGGIVQGACNSMAFLHLFLRADAINSLNSKWRYLRVVGMVLVAANWAALGAVIVDRTYKEVQGPD 138          
BLAST of jgi.p|Trimin1|352665 vs. uniprot
Match: A0A835Z9N7_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z9N7_9STRA)

HSP 1 Score: 98.2 bits (243), Expect = 1.290e-18
Identity = 55/156 (35.26%), Postives = 85/156 (54.49%), Query Frame = 0
Query:    7 FPAYVEIWSLSVAQMVGLQTTAAFGYRYFTKHKAVINLTGLLASVLTLFFSTWAITLWFTGLGSISCMAIQVVNGLCLSSSNALAFVHLFLKADASNKLNPRWPVWRTAAIMSIVANWIILVVVHALITTKEAPNPNLGGEARCKWTFEEYTFKLK 162
            F AY E   L+   ++ L+    FG R   +    +N+TG +AS++ + +    +  ++TG   +SC  ++++ G+   SSNALAF+HLFL+ADA NK+N  W  WR   I     NW  L+ V    T   A +    G  RCK+TF++ TF+ K
Sbjct:    6 FFAYFETTCLTTTFIIALEVGWFFGERCVLRKANAMNITGFMASLIAVTYCFLKLIYFYTGAEELSCDQLKIILGVGQGSSNALAFLHLFLRADAVNKINTHWRPWRWFGIALTALNWATLLAVCFTRTAVLATS----GSQRCKFTFDQSTFEAK 157          
BLAST of jgi.p|Trimin1|352665 vs. uniprot
Match: A0A835ZIT3_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZIT3_9STRA)

HSP 1 Score: 88.6 bits (218), Expect = 2.270e-15
Identity = 50/127 (39.37%), Postives = 76/127 (59.84%), Query Frame = 0
Query:   37 KHKAVINLTGLLASVLTLFFSTWAITLWFTGLGSISC-MAIQVVNGLCLSSSNALAFVHLFLKADASNKLNPRWPVWRTAAIMSIVANWIILVVVHALITTKEAPNPNLGGEARCKWTFEEYTFKLK 162
            +H  +I+ TG LASVLT+F+  + +  ++  + S     A+  V  +  ++SNALAF+HLFL+ADA N +NP WP WR   I  +VA  I+L+ V A  + +   NP  G   RC+ ++E  +F LK
Sbjct:   26 RHPLMIHWTGFLASVLTIFYCVYELCYYYVNMASRDAHCAVFKVWIVMRTASNALAFLHLFLRADAVNAINPNWPPWRRFGIALLVATLIMLIAVAATRSARLVRNPPFG--ERCEQSYEPVSFALK 150          
BLAST of jgi.p|Trimin1|352665 vs. uniprot
Match: A0A6H5L5W9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L5W9_9PHAE)

HSP 1 Score: 85.1 bits (209), Expect = 4.070e-15
Identity = 43/92 (46.74%), Postives = 59/92 (64.13%), Query Frame = 0
Query:   72 SCMAIQVVNGLCLSSSNALAFVHLFLKADASNKLNPRW-PVWRTAAIMSIVANWIILVVVHALITTKEAPNPNLGGEARCKWTFEEYTFKLK 162
            SC  +  VNG C+S+SNA  F+HLF+KADASN+ NP+W   +R   + +   NW+ L VVHAL+   +     L G  RCK+TFE  +F+LK
Sbjct:    3 SCTTLAAVNGTCMSASNAFTFLHLFVKADASNQRNPKWRKFYRWVGVATTAFNWVTLAVVHALLEGTQVDG--LDGP-RCKFTFEMNSFRLK 91          
BLAST of jgi.p|Trimin1|352665 vs. uniprot
Match: A0A836CG65_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CG65_9STRA)

HSP 1 Score: 79.0 bits (193), Expect = 1.200e-12
Identity = 46/121 (38.02%), Postives = 65/121 (53.72%), Query Frame = 0
Query:   42 INLTGLLASVLTLFFSTWAITLWFTGL-GSISCMAIQVVNGLCLSSSNALAFVHLFLKADASNKLNPRWPVWRTAAIMSIVANWIILVVVHALITTKEAPNPNLGGEARCKWTFEEYTFKL 161
            I  T LLA+++ + ++TW +  ++ GL             G+  S SNALAF+HLFL+AD +N +NP W +WR   I   V NW +L+V  AL      P   LG  ARC   +E  +F L
Sbjct:   61 ITATALLAALICVVYTTWELAYFYAGLMAQPDTCKTATAWGVLRSISNALAFLHLFLRADVANSINPHWHMWRRVGIALTVINWALLIVAPALRRITLIPT-KLG--ARCSAQYESVSFTL 178          
BLAST of jgi.p|Trimin1|352665 vs. uniprot
Match: A0A835Z9W2_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z9W2_9STRA)

HSP 1 Score: 71.2 bits (173), Expect = 1.250e-9
Identity = 55/165 (33.33%), Postives = 78/165 (47.27%), Query Frame = 0
Query:    1 MSHATNFPAYVEIWSLSVAQMVGLQTTAAFGYRYFTKHKAVINLTGLLASVLTLFFSTWAITLWFTGLGSISCMAIQVVNGLCL-SSSNALAFVHLFLKADASNKLNPRWPVWRTAAIMSIVANWIILVVVHALITTKEA---PNPNLGGE------ARCKWTFE 155
            MSHAT F        LSV+  + ++T   FG R     +  +  TG LAS+ T  +    +  +F  +   +    Q      L  +SN+LAF+HLFL+A+A N LNP+WP WR A I   V    +L +V A    K     P+P+   E      A  KWT +
Sbjct:    1 MSHAT-FDDLFTTSCLSVSCTIAVETGWFFGMRLVYGVRNAMAWTGFLASLFTAIYCVHELCYYFVDVADQTASCAQFKAFFILRGASNSLAFLHLFLRANAVNSLNPKWPPWRRAGIALTVVTLGVLALVAATRGAKPTASPPHPSRCQEFIAPIPATLKWTLQ 164          
The following BLAST results are available for this feature:
BLAST of jgi.p|Trimin1|352665 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 11
Match NameE-valueIdentityDescription
A0A835ZKC7_9STRA2.480e-258100.00Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A835Z900_9STRA8.690e-3646.91Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
D7FXM9_ECTSI9.370e-2843.67Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A835Z0T7_9STRA2.990e-2137.91Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A835ZCN3_9STRA1.530e-1937.31Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A835Z9N7_9STRA1.290e-1835.26Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A835ZIT3_9STRA2.270e-1539.37Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A6H5L5W9_9PHAE4.070e-1546.74Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A836CG65_9STRA1.200e-1238.02Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A835Z9W2_9STRA1.250e-933.33Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Contig_127contigContig_127:350115..354988 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Tribonema minus UTEX_B_31562021-06-17
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
jgi.p|Trimin1|352665mRNA_14876Tribonema minus UTEX_B_3156 mRNAContig_127 350115..354988 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Trimin1|352665|estExt_Genemark1.C_Ctg_1270042 ID=Trimin1|352665|estExt_Genemark1.C_Ctg_1270042|Name=jgi.p|Trimin1|352665|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=510bp
MSHATNFPAYVEIWSLSVAQMVGLQTTAAFGYRYFTKHKAVINLTGLLAS
VLTLFFSTWAITLWFTGLGSISCMAIQVVNGLCLSSSNALAFVHLFLKAD
ASNKLNPRWPVWRTAAIMSIVANWIILVVVHALITTKEAPNPNLGGEARC
KWTFEEYTFKLKCGTAAGGAAAAAAAAVTAAAAAAAAAAAAAAGAFSAST
MRRHRVDRGGGEVAAPLAVLCWLVQLFNHLLCVSMFASLLLNNLRSLLLV
QLFNHLLCVSLFVWPLLNHLCLPPYSPELVQLFNHLLCVSLFVWPLLNHL
QSLRTARHPRGSFTNGTATGALTTTGVTNDSVKLYKALVTRAVVAMIVSS
AYCVQLYKALVTRADVAMIVSSAVQLYKALVTRADVAMITAAPSQLAPAN
NGAVRAPHTTLMTILAIIKYDITLMTILAIIRFDNPTSLIPVFPLAVLDN
ACTLESIYFAIDLSGSAGAQQRLSISQLEAALAMSGSVNLSGTDQAEGAP
KSTIVSAQV*
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