Trimin1|352662|estExt_Genemark1.C_Ctg_1270039 (polypeptide) Tribonema minus UTEX_B_3156

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
Namejgi.p|Trimin1|352662
Unique NameTrimin1|352662|estExt_Genemark1.C_Ctg_1270039
Typepolypeptide
OrganismTribonema minus UTEX_B_3156 (Tribonema minus UTEX_B_3156 )
Sequence length190
Homology
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BLAST of jgi.p|Trimin1|352662 vs. uniprot
Match: A0A835ZE08_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZE08_9STRA)

HSP 1 Score: 371 bits (953), Expect = 5.240e-130
Identity = 189/189 (100.00%), Postives = 189/189 (100.00%), Query Frame = 0 
Query:    1 MPLTNEDDVMLLLQEINLDLHRWTVHKAEGQGLLSELSNASLSRSFVSDTSSAWGPLAGTSVPGTVALKLEAKVCKLQLDLQGVVTNLAGCAKSVIDTAAQLQEQHGGGADGWHNGGYSAADIAQAALALGRMLEREVAVAEAVCADAGDCSSRDTLTLYAAAWMMQPYMERGLWKDLLRMTETGKPGR 189
            MPLTNEDDVMLLLQEINLDLHRWTVHKAEGQGLLSELSNASLSRSFVSDTSSAWGPLAGTSVPGTVALKLEAKVCKLQLDLQGVVTNLAGCAKSVIDTAAQLQEQHGGGADGWHNGGYSAADIAQAALALGRMLEREVAVAEAVCADAGDCSSRDTLTLYAAAWMMQPYMERGLWKDLLRMTETGKPGR
Sbjct:    1 MPLTNEDDVMLLLQEINLDLHRWTVHKAEGQGLLSELSNASLSRSFVSDTSSAWGPLAGTSVPGTVALKLEAKVCKLQLDLQGVVTNLAGCAKSVIDTAAQLQEQHGGGADGWHNGGYSAADIAQAALALGRMLEREVAVAEAVCADAGDCSSRDTLTLYAAAWMMQPYMERGLWKDLLRMTETGKPGR 189
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BLAST of jgi.p|Trimin1|352662 vs. uniprot
Match: A0A835ZCP9_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZCP9_9STRA)

HSP 1 Score: 269 bits (688), Expect = 1.900e-89
Identity = 141/172 (81.98%), Postives = 147/172 (85.47%), Query Frame = 0 
Query:    1 MPLTNEDDVMLLLQEINLDLHRWTVHKAEGQGLLSELSNASLSRSFVSDTSSAWGPLAGTSVPGTVALKLEAKVCKLQLDLQGVVTNLAGCAKSVIDTAAQLQEQHGGGADGWHNGGYSAADIAQAALALGRMLEREVAVAEAVCADAGDCSSRDTLTLYAAAWMMQPYMER 172
            MPLTNEDDV++LLQEINLDLHRWTVHKAEGQ +                     GPLAGTSVPGTVALKLEAKVCKLQLDLQGVVTNLAGCAKS IDTAAQLQEQHGGGADGWHNGGYSAADIAQAALALGRML+REVAVAEAVCADAGDCSSRDTLTLYAAAWMMQP + +
Sbjct:    1 MPLTNEDDVLMLLQEINLDLHRWTVHKAEGQRV---------------------GPLAGTSVPGTVALKLEAKVCKLQLDLQGVVTNLAGCAKSAIDTAAQLQEQHGGGADGWHNGGYSAADIAQAALALGRMLKREVAVAEAVCADAGDCSSRDTLTLYAAAWMMQPTISK 151
The following BLAST results are available for this feature:
BLAST of jgi.p|Trimin1|352662 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A835ZE08_9STRA5.240e-130100.00Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A835ZCP9_9STRA1.900e-8981.98Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Contig_127contigContig_127:336000..336569 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Tribonema minus UTEX_B_31562021-06-17
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
jgi.p|Trimin1|352662mRNA_14872Tribonema minus UTEX_B_3156 mRNAContig_127 336000..336569 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Trimin1|352662|estExt_Genemark1.C_Ctg_1270039 ID=Trimin1|352662|estExt_Genemark1.C_Ctg_1270039|Name=jgi.p|Trimin1|352662|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=190bp
MPLTNEDDVMLLLQEINLDLHRWTVHKAEGQGLLSELSNASLSRSFVSDT
SSAWGPLAGTSVPGTVALKLEAKVCKLQLDLQGVVTNLAGCAKSVIDTAA
QLQEQHGGGADGWHNGGYSAADIAQAALALGRMLEREVAVAEAVCADAGD
CSSRDTLTLYAAAWMMQPYMERGLWKDLLRMTETGKPGR*
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